Product Details

Primer Sequences

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Primer Chromosome Location

Chr.7: 27145505-27146011 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

HOXA-AS3

Entrez Gene ID

100133311

Gene Name

HOXA cluster antisense RNA 3

Gene Aliases

HOXA6as

UniGene

Hs.610216

Gene Chromosome Location

Chr.7: 27140364-27155928 on Build GRCh38

Transcripts

NR_038832.1 XM_005249730.2 XM_006715715.2 XM_011515343.2 NM_024014.3

Gene Symbol

HOXA3

Entrez Gene ID

3200

Gene Name

homeobox A3

Gene Aliases

HOX1, HOX1E

UniGene

Hs.659337

Gene Chromosome Location

Chr.7: 27106190-27152581 on Build GRCh38

Transcripts

NR_038832.1 XM_005249730.2 XM_006715715.2 XM_011515343.2 NM_024014.3

Gene Symbol

HOXA6

Entrez Gene ID

3203

Gene Name

homeobox A6

Gene Aliases

HOX1, HOX1.2, HOX1B

UniGene

Hs.679517

Gene Chromosome Location

Chr.7: 27145583-27147774 on Build GRCh38

Transcripts

NR_038832.1 XM_005249730.2 XM_006715715.2 XM_011515343.2 NM_024014.3

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
5912613	c.549C>T	p.R183R	Chr.7: 27145811-27145811 on Build GRCh38
600785	c.618C>G	p.R206R	Chr.7: 27145742-27145742 on Build GRCh38
7267070	c.564C>T	p.I188I	Chr.7: 27145796-27145796 on Build GRCh38
7277497	c.636G>T	p.K212N	Chr.7: 27145724-27145724 on Build GRCh38
5872543	c.473G>A	p.G158D	Chr.7: 27145887-27145887 on Build GRCh38
5498959	c.476G>A	p.R159H	Chr.7: 27145884-27145884 on Build GRCh38
5417713	c.558C>T	p.I186I	Chr.7: 27145802-27145802 on Build GRCh38
382456	c.470G>T	p.R157L	Chr.7: 27145890-27145890 on Build GRCh38
384829	c.533G>T	p.R178L	Chr.7: 27145827-27145827 on Build GRCh38
1088862	c.571G>A	p.A191T	Chr.7: 27145789-27145789 on Build GRCh38
6428675	c.689A>T	p.K230M	Chr.7: 27145671-27145671 on Build GRCh38
1088861	c.665C>A	p.P222H	Chr.7: 27145695-27145695 on Build GRCh38
6177738	c.651C>T	p.I217I	Chr.7: 27145709-27145709 on Build GRCh38
6214896	c.573G>A	p.A191A	Chr.7: 27145787-27145787 on Build GRCh38
176780	c.554G>A	p.R185H	Chr.7: 27145806-27145806 on Build GRCh38
40965	c.591C>T	p.R197R	Chr.7: 27145769-27145769 on Build GRCh38
2153056	c.597C>G	p.I199M	Chr.7: 27145763-27145763 on Build GRCh38
6681628	c.546G>A	p.R182R	Chr.7: 27145814-27145814 on Build GRCh38
6681625	c.586G>A	p.E196K	Chr.7: 27145774-27145774 on Build GRCh38
6681623	c.616C>T	p.R206C	Chr.7: 27145744-27145744 on Build GRCh38
3880405	c.466C>T	p.R156C	Chr.7: 27145894-27145894 on Build GRCh38
6681624	c.565G>A	p.A189T	Chr.7: 27145795-27145795 on Build GRCh38
3880403	c.620G>A	p.R207H	Chr.7: 27145740-27145740 on Build GRCh38
3880404	c.572C>T	p.A191V	Chr.7: 27145788-27145788 on Build GRCh38
1488498	c.528C>G	p.F176L	Chr.7: 27145832-27145832 on Build GRCh38
6863584	c.585C>T	p.T195T	Chr.7: 27145775-27145775 on Build GRCh38
4832627	c.460C>T	p.H154Y	Chr.7: 27145900-27145900 on Build GRCh38
6681633	c.488C>T	p.T163M	Chr.7: 27145872-27145872 on Build GRCh38
3027222	c.660G>A	p.T220T	Chr.7: 27145700-27145700 on Build GRCh38
6681634	c.697G>A	p.E233K	Chr.7: 27145663-27145663 on Build GRCh38
4919522	c.590G>A	p.R197H	Chr.7: 27145770-27145770 on Build GRCh38
3027235	c.489G>A	p.T163T	Chr.7: 27145871-27145871 on Build GRCh38
281758	c.548G>A	p.R183H	Chr.7: 27145812-27145812 on Build GRCh38
4361810	c.659C>T	p.T220M	Chr.7: 27145701-27145701 on Build GRCh38
2156940	c.544C>T	p.R182W	Chr.7: 27145816-27145816 on Build GRCh38
6681629	c.521T>A	p.F174Y	Chr.7: 27145839-27145839 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs889282082	Chr.7: 27145835-27145835 on Build GRCh38
rs969687645	Chr.7: 27145981-27145981 on Build GRCh38
rs751592140	Chr.7: 27145891-27145891 on Build GRCh38
rs780966093	Chr.7: 27145830-27145830 on Build GRCh38
rs779260946	Chr.7: 27145732-27145732 on Build GRCh38
rs1051995899	Chr.7: 27145820-27145820 on Build GRCh38
rs777258790	Chr.7: 27145610-27145610 on Build GRCh38
rs750035049	Chr.7: 27145906-27145906 on Build GRCh38
rs754833942	Chr.7: 27145668-27145668 on Build GRCh38
rs773162689	Chr.7: 27145796-27145796 on Build GRCh38
rs759859340	Chr.7: 27145871-27145871 on Build GRCh38
rs756900527	Chr.7: 27145708-27145708 on Build GRCh38
rs747555299	Chr.7: 27145936-27145936 on Build GRCh38
rs747043479	Chr.7: 27145865-27145865 on Build GRCh38
rs762684090	Chr.7: 27145884-27145884 on Build GRCh38
rs771048597	Chr.7: 27145869-27145869 on Build GRCh38
rs761780955	Chr.7: 27145658-27145658 on Build GRCh38
rs549373477	Chr.7: 27145813-27145813 on Build GRCh38
rs775287994	Chr.7: 27145877-27145877 on Build GRCh38
rs369149965	Chr.7: 27145771-27145771 on Build GRCh38
rs778231475	Chr.7: 27145935-27145935 on Build GRCh38
rs1031693818	Chr.7: 27145910-27145910 on Build GRCh38
rs547120546	Chr.7: 27145597-27145597 on Build GRCh38
rs769108946	Chr.7: 27145719-27145719 on Build GRCh38
rs568413914	Chr.7: 27145943-27145943 on Build GRCh38
rs936459843	Chr.7: 27145724-27145724 on Build GRCh38
rs775937133	Chr.7: 27145632-27145632 on Build GRCh38
rs528610359	Chr.7: 27145941-27145941 on Build GRCh38
rs750134271	Chr.7: 27145832-27145832 on Build GRCh38
rs774940325	Chr.7: 27145652-27145652 on Build GRCh38
rs769919704	Chr.7: 27145873-27145873 on Build GRCh38
rs188748627	Chr.7: 27145741-27145741 on Build GRCh38
rs531925898	Chr.7: 27145932-27145932 on Build GRCh38
rs749671837	Chr.7: 27145633-27145633 on Build GRCh38
rs767679442	Chr.7: 27145659-27145659 on Build GRCh38
rs769000807	Chr.7: 27145637-27145637 on Build GRCh38
rs552523427	Chr.7: 27145802-27145802 on Build GRCh38
rs370024061	Chr.7: 27145704-27145704 on Build GRCh38
rs899753603	Chr.7: 27145788-27145788 on Build GRCh38
rs776861717	Chr.7: 27145778-27145778 on Build GRCh38
rs373414972	Chr.7: 27145801-27145801 on Build GRCh38
rs756845392	Chr.7: 27145828-27145828 on Build GRCh38
rs1018891911	Chr.7: 27145573-27145573 on Build GRCh38
rs918176154	Chr.7: 27145692-27145692 on Build GRCh38
rs201765874	Chr.7: 27145922-27145922 on Build GRCh38
rs777482036	Chr.7: 27145701-27145701 on Build GRCh38
rs1000312377	Chr.7: 27145740-27145740 on Build GRCh38
rs1008095015	Chr.7: 27145775-27145775 on Build GRCh38
rs770004517	Chr.7: 27145863-27145864 on Build GRCh38
rs761176216	Chr.7: 27145846-27145846 on Build GRCh38
rs773221274	Chr.7: 27145763-27145763 on Build GRCh38
rs761560630	Chr.7: 27145600-27145600 on Build GRCh38
rs753066543	Chr.7: 27145930-27145930 on Build GRCh38
rs759230509	Chr.7: 27145789-27145789 on Build GRCh38
rs770015188	Chr.7: 27145965-27145965 on Build GRCh38
rs375876584	Chr.7: 27145710-27145710 on Build GRCh38
rs527481782	Chr.7: 27145561-27145561 on Build GRCh38
rs772034382	Chr.7: 27145744-27145744 on Build GRCh38
rs764072162	Chr.7: 27145890-27145890 on Build GRCh38
rs62454417	Chr.7: 27145661-27145661 on Build GRCh38
rs755736796	Chr.7: 27145917-27145917 on Build GRCh38
rs1044749855	Chr.7: 27145707-27145707 on Build GRCh38
rs1025347818	Chr.7: 27145938-27145938 on Build GRCh38
rs141474913	Chr.7: 27145792-27145792 on Build GRCh38
rs757840868	Chr.7: 27145698-27145698 on Build GRCh38
rs779394684	Chr.7: 27145843-27145843 on Build GRCh38
rs981016601	Chr.7: 27145983-27145983 on Build GRCh38
rs908995932	Chr.7: 27145670-27145670 on Build GRCh38
rs771103652	Chr.7: 27145777-27145777 on Build GRCh38
rs764129431	Chr.7: 27145815-27145815 on Build GRCh38
rs1035994380	Chr.7: 27145799-27145799 on Build GRCh38
rs746724245	Chr.7: 27145618-27145618 on Build GRCh38
rs376435844	Chr.7: 27145870-27145870 on Build GRCh38
rs565107997	Chr.7: 27145558-27145558 on Build GRCh38
rs770267325	Chr.7: 27145624-27145624 on Build GRCh38
rs765036046	Chr.7: 27145673-27145673 on Build GRCh38
rs781019309	Chr.7: 27145709-27145709 on Build GRCh38
rs751072208	Chr.7: 27145816-27145816 on Build GRCh38
rs752720773	Chr.7: 27145676-27145676 on Build GRCh38
rs766603289	Chr.7: 27145663-27145663 on Build GRCh38
rs761372561	Chr.7: 27145894-27145894 on Build GRCh38
rs548820240	Chr.7: 27145940-27145940 on Build GRCh38
rs377212926	Chr.7: 27145666-27145666 on Build GRCh38
rs992451084	Chr.7: 27145691-27145691 on Build GRCh38
rs17500863	Chr.7: 27145901-27145901 on Build GRCh38
rs202074180	Chr.7: 27145854-27145854 on Build GRCh38
rs74417774	Chr.7: 27145748-27145748 on Build GRCh38
rs746325517	Chr.7: 27145828-27145828 on Build GRCh38
rs974771095	Chr.7: 27145629-27145629 on Build GRCh38
rs748477751	Chr.7: 27145845-27145845 on Build GRCh38

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