Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 140803530-140803787 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

PCDHA1

Entrez Gene ID

56147

Gene Name

protocadherin alpha 1

Gene Aliases

PCDH-ALPHA1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140786136-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_031496.1 NM_018906.2 NM_031497.1

Gene Symbol

PCDHA2

Entrez Gene ID

56146

Gene Name

protocadherin alpha 2

Gene Aliases

PCDH-ALPHA2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140794859-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_031496.1 NM_018906.2 NM_031497.1

Gene Symbol

PCDHA3

Entrez Gene ID

56145

Gene Name

protocadherin alpha 3

Gene Aliases

PCDH-ALPHA3

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140801198-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_031496.1 NM_018906.2 NM_031497.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
5931704	c.2380G>A	p.D794N	Chr.5: 140803577-140803577 on Build GRCh38
4843003	c.2438C>G	p.S813*	Chr.5: 140803635-140803635 on Build GRCh38
6469990	c.2343T>A	p.I781I	Chr.5: 140803540-140803540 on Build GRCh38
1433774	c.2420C>A	p.P807Q	Chr.5: 140803617-140803617 on Build GRCh38
6500465	c.2403delT	p.Y803fs*>22	Chr.5: 140803600-140803600 on Build GRCh38
3239773	c.2367G>A	p.Q789Q	Chr.5: 140803564-140803564 on Build GRCh38
288682	c.2475A>C	p.*825Y	Chr.5: 140803672-140803672 on Build GRCh38
5918743	c.2348G>A	p.R783Q	Chr.5: 140803545-140803545 on Build GRCh38
3239774	c.2438C>T	p.S813L	Chr.5: 140803635-140803635 on Build GRCh38
6513315	c.2470C>A	p.H824N	Chr.5: 140803667-140803667 on Build GRCh38
3239772	c.2367G>A	p.Q789Q	Chr.5: 140803564-140803564 on Build GRCh38
5928714	c.2345G>A	p.S782N	Chr.5: 140803542-140803542 on Build GRCh38
3609612	c.2368G>A	p.D790N	Chr.5: 140803565-140803565 on Build GRCh38
3609614	c.2387C>T	p.S796L	Chr.5: 140803584-140803584 on Build GRCh38
5918744	c.2348G>A	p.R783Q	Chr.5: 140803545-140803545 on Build GRCh38
5928715	c.2345G>A	p.S782N	Chr.5: 140803542-140803542 on Build GRCh38
6469991	c.2343T>A	p.I781I	Chr.5: 140803540-140803540 on Build GRCh38
5931705	c.2380G>A	p.D794N	Chr.5: 140803577-140803577 on Build GRCh38
3850835	c.2377G>A	p.V793I	Chr.5: 140803574-140803574 on Build GRCh38
3609609	c.2338C>T	p.P780S	Chr.5: 140803535-140803535 on Build GRCh38
5588574	c.2464G>A	p.E822K	Chr.5: 140803661-140803661 on Build GRCh38
4585466	c.2392A>G	p.K798E	Chr.5: 140803589-140803589 on Build GRCh38
3609611	c.2346C>T	p.S782S	Chr.5: 140803543-140803543 on Build GRCh38
3609613	c.2368G>A	p.D790N	Chr.5: 140803565-140803565 on Build GRCh38
3850834	c.2377G>A	p.V793I	Chr.5: 140803574-140803574 on Build GRCh38
3609615	c.2387C>T	p.S796L	Chr.5: 140803584-140803584 on Build GRCh38
4924207	c.2462T>A	p.L821Q	Chr.5: 140803659-140803659 on Build GRCh38
4585467	c.2392A>G	p.K798E	Chr.5: 140803589-140803589 on Build GRCh38
3609608	c.2338C>T	p.P780S	Chr.5: 140803535-140803535 on Build GRCh38
4399977	c.2412A>G	p.L804L	Chr.5: 140803609-140803609 on Build GRCh38
6500464	c.2394+9delT	p.?	Chr.5: 140803600-140803600 on Build GRCh38
3609610	c.2346C>T	p.S782S	Chr.5: 140803543-140803543 on Build GRCh38
7173288	c.2442C>A	p.F814L	Chr.5: 140803639-140803639 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs782622093	Chr.5: 140803557-140803557 on Build GRCh38
rs781820342	Chr.5: 140803678-140803678 on Build GRCh38
rs543206903	Chr.5: 140803726-140803726 on Build GRCh38
rs782142850	Chr.5: 140803638-140803638 on Build GRCh38
rs577997860	Chr.5: 140803612-140803612 on Build GRCh38
rs376686641	Chr.5: 140803590-140803590 on Build GRCh38
rs782270719	Chr.5: 140803593-140803593 on Build GRCh38
rs782685933	Chr.5: 140803627-140803627 on Build GRCh38
rs782640971	Chr.5: 140803686-140803686 on Build GRCh38
rs781914868	Chr.5: 140803698-140803698 on Build GRCh38
rs17844265	Chr.5: 140803652-140803652 on Build GRCh38
rs782061277	Chr.5: 140803625-140803625 on Build GRCh38
rs782003292	Chr.5: 140803708-140803708 on Build GRCh38
rs201656415	Chr.5: 140803607-140803607 on Build GRCh38
rs1003396292	Chr.5: 140803622-140803622 on Build GRCh38
rs974545602	Chr.5: 140803703-140803703 on Build GRCh38
rs2240693	Chr.5: 140803740-140803740 on Build GRCh38
rs782316183	Chr.5: 140803693-140803693 on Build GRCh38
rs782421319	Chr.5: 140803589-140803589 on Build GRCh38
rs781853689	Chr.5: 140803644-140803644 on Build GRCh38
rs782237100	Chr.5: 140803690-140803690 on Build GRCh38
rs7707310	Chr.5: 140803680-140803680 on Build GRCh38
rs898664223	Chr.5: 140803569-140803569 on Build GRCh38
rs941737742	Chr.5: 140803755-140803755 on Build GRCh38
rs782283652	Chr.5: 140803702-140803702 on Build GRCh38
rs539044663	Chr.5: 140803649-140803649 on Build GRCh38
rs782182345	Chr.5: 140803587-140803587 on Build GRCh38
rs782597617	Chr.5: 140803578-140803578 on Build GRCh38
rs782118084	Chr.5: 140803714-140803714 on Build GRCh38
rs190117993	Chr.5: 140803707-140803707 on Build GRCh38
rs782224885	Chr.5: 140803562-140803562 on Build GRCh38
rs782466651	Chr.5: 140803572-140803572 on Build GRCh38
rs781810632	Chr.5: 140803653-140803653 on Build GRCh38
rs572043416	Chr.5: 140803675-140803675 on Build GRCh38
rs782450131	Chr.5: 140803671-140803671 on Build GRCh38
rs560789364	Chr.5: 140803683-140803683 on Build GRCh38
rs182945871	Chr.5: 140803739-140803739 on Build GRCh38

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