Product Details

Primer Sequences

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Primer Chromosome Location

Chr.11: 27658401-27658626 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

BDNF

Entrez Gene ID

627

Gene Name

brain derived neurotrophic factor

Gene Aliases

ANON2, BULN2

UniGene

Hs.502182

Gene Chromosome Location

Chr.11: 27654893-27722058 on Build GRCh38

Transcripts

NM_001143805.1 NM_001143806.1 NM_001143807.1 NM_001143808.1 NM_001143809.1 NM_001143810.1 NM_001143811.1 NM_001143812.1 NM_001143813.1 NM_001143814.1 NM_001143816.1 NM_001709.4 NM_170731.4 NM_170732.4 NM_170733.3 NM_170734.3 NM_170735.5 XM_011520280.2 NR_002832.2 NR_033312.1 NR_033313.1 NR_033314.1 NR_033315.1

Gene Symbol

BDNF-AS

Entrez Gene ID

497258

Gene Name

BDNF antisense RNA

Gene Aliases

ANTI-BDNF, BDNF, BDNF-AS1, BDNFOS, NCRNA00049

UniGene

Hs.675323

Gene Chromosome Location

Chr.11: 27506852-27698171 on Build GRCh38

Transcripts

NM_001143805.1 NM_001143806.1 NM_001143807.1 NM_001143808.1 NM_001143809.1 NM_001143810.1 NM_001143811.1 NM_001143812.1 NM_001143813.1 NM_001143814.1 NM_001143816.1 NM_001709.4 NM_170731.4 NM_170732.4 NM_170733.3 NM_170734.3 NM_170735.5 XM_011520280.2 NR_002832.2 NR_033312.1 NR_033313.1 NR_033314.1 NR_033315.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4869018	c.196G>A	p.A66T	Chr.11: 27658414-27658414 on Build GRCh38
7210256	c.156G>A	p.V52V	Chr.11: 27658454-27658454 on Build GRCh38
3446587	c.271G>A	p.V91I	Chr.11: 27658540-27658540 on Build GRCh38
4032242	c.111A>C	p.Q37H	Chr.11: 27658478-27658478 on Build GRCh38
7109087	c.77C>T	p.S26L	Chr.11: 27658533-27658533 on Build GRCh38
7001385	c.59_60insTAAGGGG	p.F21fs*51	Chr.11: 27658529-27658530 on Build GRCh38
687626	c.72G>A	p.M24I	Chr.11: 27658517-27658517 on Build GRCh38
4032240	c.333A>C	p.Q111H	Chr.11: 27658478-27658478 on Build GRCh38
4032241	c.132A>C	p.Q44H	Chr.11: 27658478-27658478 on Build GRCh38
6238357	c.258T>G	p.L86L	Chr.11: 27658553-27658553 on Build GRCh38
7178645	c.15G>A	p.V5V	Chr.11: 27658574-27658574 on Build GRCh38
1585689	c.297G>T	p.K99N	Chr.11: 27658514-27658514 on Build GRCh38
5027369	c.17G>A	p.R6K	Chr.11: 27658572-27658572 on Build GRCh38
6611156	c.333A>G	p.Q111Q	Chr.11: 27658478-27658478 on Build GRCh38
5483558	c.154G>A	p.E52K	Chr.11: 27658435-27658435 on Build GRCh38
4190900	c.149C>A	p.P50Q	Chr.11: 27658461-27658461 on Build GRCh38
926151	c.75G>T	p.K25N	Chr.11: 27658514-27658514 on Build GRCh38
5816311	c.195G>T	p.K65N	Chr.11: 27658415-27658415 on Build GRCh38
7109086	c.278C>T	p.S93L	Chr.11: 27658533-27658533 on Build GRCh38
5816312	c.174G>T	p.K58N	Chr.11: 27658415-27658415 on Build GRCh38
6238358	c.57T>G	p.L19L	Chr.11: 27658553-27658553 on Build GRCh38
2113452	c.350C>A	p.P117Q	Chr.11: 27658461-27658461 on Build GRCh38
5703974	c.41T>G	p.L14R	Chr.11: 27658548-27658548 on Build GRCh38
4479128	c.28C>T	p.H10Y	Chr.11: 27658582-27658582 on Build GRCh38
3446586	c.87G>A	p.M29I	Chr.11: 27658502-27658502 on Build GRCh38
6132150	c.69G>A	p.M23I	Chr.11: 27658541-27658541 on Build GRCh38
6132151	c.48G>A	p.M16I	Chr.11: 27658541-27658541 on Build GRCh38
1146696	c.294G>A	p.M98I	Chr.11: 27658517-27658517 on Build GRCh38
7210255	c.357G>A	p.V119V	Chr.11: 27658454-27658454 on Build GRCh38
3446581	c.369G>A	p.G123G	Chr.11: 27658442-27658442 on Build GRCh38
1246062	c.33C>A	p.I11I	Chr.11: 27658556-27658556 on Build GRCh38
3446588	c.70G>A	p.V24I	Chr.11: 27658540-27658540 on Build GRCh38
5483556	c.376G>A	p.E126K	Chr.11: 27658435-27658435 on Build GRCh38
6238359	c.36T>G	p.L12L	Chr.11: 27658553-27658553 on Build GRCh38
3446582	c.168G>A	p.G56G	Chr.11: 27658442-27658442 on Build GRCh38
5703972	c.263T>G	p.L88R	Chr.11: 27658548-27658548 on Build GRCh38
4032245	c.93A>G	p.E31E	Chr.11: 27658496-27658496 on Build GRCh38
7178644	c.36G>A	p.V12V	Chr.11: 27658574-27658574 on Build GRCh38
4872552	c.96G>T	p.K32N	Chr.11: 27658514-27658514 on Build GRCh38
1353343	c.59A>G	p.Y20C	Chr.11: 27658530-27658530 on Build GRCh38
4032239	c.136C>T	p.R46W	Chr.11: 27658453-27658453 on Build GRCh38
1246061	c.255C>A	p.I85I	Chr.11: 27658556-27658556 on Build GRCh38
7001384	c.80_81insTAAGGGG	p.F28fs*51	Chr.11: 27658529-27658530 on Build GRCh38
1353342	c.281A>G	p.Y94C	Chr.11: 27658530-27658530 on Build GRCh38
4479129	c.7C>T	p.H3Y	Chr.11: 27658582-27658582 on Build GRCh38
4947976	c.80A>G	p.Y27C	Chr.11: 27658530-27658530 on Build GRCh38
7109088	c.56C>T	p.S19L	Chr.11: 27658533-27658533 on Build GRCh38
5816310	c.396G>T	p.K132N	Chr.11: 27658415-27658415 on Build GRCh38
4032238	c.157C>T	p.R53W	Chr.11: 27658453-27658453 on Build GRCh38
1585690	c.397G>A	p.A133T	Chr.11: 27658414-27658414 on Build GRCh38
4032243	c.315A>G	p.E105E	Chr.11: 27658496-27658496 on Build GRCh38
6132149	c.270G>A	p.M90I	Chr.11: 27658541-27658541 on Build GRCh38
4032237	c.358C>T	p.R120W	Chr.11: 27658453-27658453 on Build GRCh38
2113453	c.128C>A	p.P43Q	Chr.11: 27658461-27658461 on Build GRCh38
5027368	c.38G>A	p.R13K	Chr.11: 27658572-27658572 on Build GRCh38
7210257	c.135G>A	p.V45V	Chr.11: 27658454-27658454 on Build GRCh38
5703973	c.62T>G	p.L21R	Chr.11: 27658548-27658548 on Build GRCh38
4032244	c.114A>G	p.E38E	Chr.11: 27658496-27658496 on Build GRCh38
5483557	c.175G>A	p.E59K	Chr.11: 27658435-27658435 on Build GRCh38
926150	c.175G>A	p.A59T	Chr.11: 27658414-27658414 on Build GRCh38
4479127	c.229C>T	p.H77Y	Chr.11: 27658582-27658582 on Build GRCh38
3446589	c.49G>A	p.V17I	Chr.11: 27658540-27658540 on Build GRCh38
7178643	c.237G>A	p.V79V	Chr.11: 27658574-27658574 on Build GRCh38
3446583	c.147G>A	p.G49G	Chr.11: 27658442-27658442 on Build GRCh38
7001383	c.281_282insTAAGGGG	p.F95fs*51	Chr.11: 27658529-27658530 on Build GRCh38
6611157	c.132A>G	p.Q44Q	Chr.11: 27658478-27658478 on Build GRCh38
3446585	c.108G>A	p.M36I	Chr.11: 27658502-27658502 on Build GRCh38
3446584	c.309G>A	p.M103I	Chr.11: 27658502-27658502 on Build GRCh38
4859314	c.93G>A	p.M31I	Chr.11: 27658517-27658517 on Build GRCh38
6611158	c.111A>G	p.Q37Q	Chr.11: 27658478-27658478 on Build GRCh38
5027367	c.239G>A	p.R80K	Chr.11: 27658572-27658572 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs943009748	Chr.11: 27658451-27658451 on Build GRCh38
rs780865517	Chr.11: 27658580-27658580 on Build GRCh38
rs764254110	Chr.11: 27658495-27658495 on Build GRCh38
rs779925777	Chr.11: 27658546-27658546 on Build GRCh38
rs759834365	Chr.11: 27658456-27658456 on Build GRCh38
rs1037807065	Chr.11: 27658458-27658458 on Build GRCh38
rs146354977	Chr.11: 27658429-27658429 on Build GRCh38
rs982182462	Chr.11: 27658569-27658569 on Build GRCh38
rs990506363	Chr.11: 27658485-27658485 on Build GRCh38
rs551445385	Chr.11: 27658592-27658592 on Build GRCh38
rs374752426	Chr.11: 27658454-27658454 on Build GRCh38
rs760902255	Chr.11: 27658490-27658490 on Build GRCh38
rs8192466	Chr.11: 27658560-27658560 on Build GRCh38
rs267602837	Chr.11: 27658486-27658486 on Build GRCh38
rs747701929	Chr.11: 27658430-27658430 on Build GRCh38
rs768158526	Chr.11: 27658421-27658421 on Build GRCh38
rs750397219	Chr.11: 27658516-27658516 on Build GRCh38
rs763357890	Chr.11: 27658452-27658452 on Build GRCh38
rs771341699	Chr.11: 27658453-27658453 on Build GRCh38
rs920340884	Chr.11: 27658484-27658484 on Build GRCh38
rs866172975	Chr.11: 27658533-27658533 on Build GRCh38
rs758200229	Chr.11: 27658526-27658526 on Build GRCh38
rs767681787	Chr.11: 27658473-27658473 on Build GRCh38
rs769259549	Chr.11: 27658432-27658432 on Build GRCh38
rs868827437	Chr.11: 27658507-27658507 on Build GRCh38
rs773773442	Chr.11: 27658444-27658444 on Build GRCh38

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