Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 140809175-140809671 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

PCDHA1

Entrez Gene ID

56147

Gene Name

protocadherin alpha 1

Gene Aliases

PCDH-ALPHA1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140786136-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_031500.2

Gene Symbol

PCDHA2

Entrez Gene ID

56146

Gene Name

protocadherin alpha 2

Gene Aliases

PCDH-ALPHA2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140794859-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_031500.2

Gene Symbol

PCDHA3

Entrez Gene ID

56145

Gene Name

protocadherin alpha 3

Gene Aliases

PCDH-ALPHA3

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140801198-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_031500.2

Gene Symbol

PCDHA4

Entrez Gene ID

56144

Gene Name

protocadherin alpha 4

Gene Aliases

CNR1, CNRN1, CRNR1, PCDH-ALPHA4

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140807074-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_031500.2

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
3239953	c.2158G>A	p.A720T	Chr.5: 140809345-140809345 on Build GRCh38
6101733	c.2027C>A	p.P676Q	Chr.5: 140809214-140809214 on Build GRCh38
3918813	c.2353C>T	p.Q785*	Chr.5: 140809540-140809540 on Build GRCh38
3239966	c.2253G>A	p.S751S	Chr.5: 140809440-140809440 on Build GRCh38
332053	c.2159C>T	p.A720V	Chr.5: 140809346-140809346 on Build GRCh38
1130909	c.2157C>T	p.T719T	Chr.5: 140809344-140809344 on Build GRCh38
6739749	c.2091C>T	p.N697N	Chr.5: 140809278-140809278 on Build GRCh38
4387698	c.2141C>T	p.T714M	Chr.5: 140809328-140809328 on Build GRCh38
205058	c.2068G>A	p.D690N	Chr.5: 140809255-140809255 on Build GRCh38
3850879	c.2118G>A	p.A706A	Chr.5: 140809305-140809305 on Build GRCh38
5060680	c.2201C>T	p.P734L	Chr.5: 140809388-140809388 on Build GRCh38
6248660	c.2168G>T	p.C723F	Chr.5: 140809355-140809355 on Build GRCh38
6101725	c.2309T>C	p.M770T	Chr.5: 140809496-140809496 on Build GRCh38
7269516	c.2092G>A	p.V698I	Chr.5: 140809279-140809279 on Build GRCh38
1061966	c.2197G>A	p.A733T	Chr.5: 140809384-140809384 on Build GRCh38
3239946	c.2044G>T	p.A682S	Chr.5: 140809231-140809231 on Build GRCh38
4003316	c.2119G>T	p.V707L	Chr.5: 140809306-140809306 on Build GRCh38
6485041	c.2073T>G	p.A691A	Chr.5: 140809260-140809260 on Build GRCh38
3609668	c.1991C>T	p.T664I	Chr.5: 140809178-140809178 on Build GRCh38
1486361	c.2134G>A	p.V712M	Chr.5: 140809321-140809321 on Build GRCh38
3409816	c.2263A>G	p.R755G	Chr.5: 140809450-140809450 on Build GRCh38
3918816	c.2385+7G>T	p.?	Chr.5: 140809579-140809579 on Build GRCh38
6739750	c.2091C>T	p.N697N	Chr.5: 140809278-140809278 on Build GRCh38
1754033	c.2191G>C	p.A731P	Chr.5: 140809378-140809378 on Build GRCh38
1061969	c.2311G>T	p.A771S	Chr.5: 140809498-140809498 on Build GRCh38
353329	c.2294C>A	p.P765H	Chr.5: 140809481-140809481 on Build GRCh38
4440037	c.2301C>A	p.T767T	Chr.5: 140809488-140809488 on Build GRCh38
5588575	c.2124C>T	p.S708S	Chr.5: 140809311-140809311 on Build GRCh38
4597153	c.2200C>G	p.P734A	Chr.5: 140809387-140809387 on Build GRCh38
1130910	c.2157C>T	p.T719T	Chr.5: 140809344-140809344 on Build GRCh38
332052	c.2159C>T	p.A720V	Chr.5: 140809346-140809346 on Build GRCh38
6989362	c.2169C>T	p.C723C	Chr.5: 140809356-140809356 on Build GRCh38
1294165	c.2284G>A	p.E762K	Chr.5: 140809471-140809471 on Build GRCh38
6485042	c.2073T>G	p.A691A	Chr.5: 140809260-140809260 on Build GRCh38
1719890	c.2302G>A	p.D768N	Chr.5: 140809489-140809489 on Build GRCh38
4903037	c.2262G>A	p.R754R	Chr.5: 140809449-140809449 on Build GRCh38
6168956	c.2056G>C	p.A686P	Chr.5: 140809243-140809243 on Build GRCh38
1433798	c.2024C>T	p.A675V	Chr.5: 140809211-140809211 on Build GRCh38
6101728	c.2280T>C	p.S760S	Chr.5: 140809467-140809467 on Build GRCh38
3609673	c.2103C>T	p.I701I	Chr.5: 140809290-140809290 on Build GRCh38
1061961	c.2028A>T	p.P676P	Chr.5: 140809215-140809215 on Build GRCh38
4959886	c.2013G>A	p.E671E	Chr.5: 140809200-140809200 on Build GRCh38
4452949	c.2351A>T	p.D784V	Chr.5: 140809538-140809538 on Build GRCh38
3239947	c.2044G>T	p.A682S	Chr.5: 140809231-140809231 on Build GRCh38
6101731	c.2174C>T	p.A725V	Chr.5: 140809361-140809361 on Build GRCh38
7269517	c.2092G>A	p.V698I	Chr.5: 140809279-140809279 on Build GRCh38
3239964	c.2252C>T	p.S751L	Chr.5: 140809439-140809439 on Build GRCh38
6889754	c.2004A>C	p.S668S	Chr.5: 140809191-140809191 on Build GRCh38
1261264	c.2115C>T	p.C705C	Chr.5: 140809302-140809302 on Build GRCh38
6432795	c.2149C>A	p.L717M	Chr.5: 140809336-140809336 on Build GRCh38
3239967	c.2253G>A	p.S751S	Chr.5: 140809440-140809440 on Build GRCh38
6198797	c.2142G>A	p.T714T	Chr.5: 140809329-140809329 on Build GRCh38
6168955	c.2056G>C	p.A686P	Chr.5: 140809243-140809243 on Build GRCh38
1294164	c.2284G>A	p.E762K	Chr.5: 140809471-140809471 on Build GRCh38
5924364	c.2036C>T	p.S679F	Chr.5: 140809223-140809223 on Build GRCh38
398591	c.2008G>A	p.V670M	Chr.5: 140809195-140809195 on Build GRCh38
1433799	c.2024C>T	p.A675V	Chr.5: 140809211-140809211 on Build GRCh38
81554	c.2061G>C	p.V687V	Chr.5: 140809248-140809248 on Build GRCh38
3918811	c.2192C>T	p.A731V	Chr.5: 140809379-140809379 on Build GRCh38
1061964	c.2193G>A	p.A731A	Chr.5: 140809380-140809380 on Build GRCh38
1061967	c.2197G>A	p.A733T	Chr.5: 140809384-140809384 on Build GRCh38
4597152	c.2200C>G	p.P734A	Chr.5: 140809387-140809387 on Build GRCh38
5924365	c.2036C>T	p.S679F	Chr.5: 140809223-140809223 on Build GRCh38
351143	c.2267C>A	p.P756Q	Chr.5: 140809454-140809454 on Build GRCh38
5592398	c.2340G>A	p.R780R	Chr.5: 140809527-140809527 on Build GRCh38
5008436	c.2227A>G	p.S743G	Chr.5: 140809414-140809414 on Build GRCh38
3918814	c.2375C>T	p.S792F	Chr.5: 140809562-140809562 on Build GRCh38
213554	c.2117C>T	p.A706V	Chr.5: 140809304-140809304 on Build GRCh38
4585469	c.2301C>T	p.T767T	Chr.5: 140809488-140809488 on Build GRCh38
6224172	c.2313C>A	p.A771A	Chr.5: 140809500-140809500 on Build GRCh38
3609674	c.2128C>A	p.L710I	Chr.5: 140809315-140809315 on Build GRCh38
3850877	c.2046G>A	p.A682A	Chr.5: 140809233-140809233 on Build GRCh38
4900480	c.2238G>A	p.G746G	Chr.5: 140809425-140809425 on Build GRCh38
6168954	c.2189G>C	p.G730A	Chr.5: 140809376-140809376 on Build GRCh38
6889755	c.2004A>C	p.S668S	Chr.5: 140809191-140809191 on Build GRCh38
1261274	c.2231C>T	p.A744V	Chr.5: 140809418-140809418 on Build GRCh38
4903038	c.2262G>A	p.R754R	Chr.5: 140809449-140809449 on Build GRCh38
3409817	c.2263A>G	p.R755G	Chr.5: 140809450-140809450 on Build GRCh38
6101726	c.2286G>T	p.E762D	Chr.5: 140809473-140809473 on Build GRCh38
1719891	c.2302G>A	p.D768N	Chr.5: 140809489-140809489 on Build GRCh38
5556007	c.2288G>A	p.G763D	Chr.5: 140809475-140809475 on Build GRCh38
3609671	c.2043G>A	p.R681R	Chr.5: 140809230-140809230 on Build GRCh38
3239954	c.2191G>A	p.A731T	Chr.5: 140809378-140809378 on Build GRCh38
1061970	c.2345G>T	p.R782I	Chr.5: 140809532-140809532 on Build GRCh38
317813	c.2116G>A	p.A706T	Chr.5: 140809303-140809303 on Build GRCh38
3239965	c.2252C>T	p.S751L	Chr.5: 140809439-140809439 on Build GRCh38
3918817	c.2392G>T	p.V798L	Chr.5: 140809579-140809579 on Build GRCh38
317812	c.2116G>A	p.A706T	Chr.5: 140809303-140809303 on Build GRCh38
6739786	c.2370G>T	p.E790D	Chr.5: 140809557-140809557 on Build GRCh38
5466290	c.2396A>G	p.*799*	Chr.5: 140809583-140809583 on Build GRCh38
5592397	c.2340G>A	p.R780R	Chr.5: 140809527-140809527 on Build GRCh38
1261273	c.2231C>T	p.A744V	Chr.5: 140809418-140809418 on Build GRCh38
1061962	c.2189G>A	p.G730D	Chr.5: 140809376-140809376 on Build GRCh38
276637	c.2371G>T	p.E791*	Chr.5: 140809558-140809558 on Build GRCh38
6101729	c.2280T>C	p.S760S	Chr.5: 140809467-140809467 on Build GRCh38
276636	c.2371G>T	p.E791*	Chr.5: 140809558-140809558 on Build GRCh38
3918812	c.2353C>T	p.Q785*	Chr.5: 140809540-140809540 on Build GRCh38
353330	c.2294C>A	p.P765H	Chr.5: 140809481-140809481 on Build GRCh38
1061965	c.2193G>A	p.A731A	Chr.5: 140809380-140809380 on Build GRCh38
3609672	c.2103C>T	p.I701I	Chr.5: 140809290-140809290 on Build GRCh38
5556006	c.2288G>A	p.G763D	Chr.5: 140809475-140809475 on Build GRCh38
5008435	c.2227A>G	p.S743G	Chr.5: 140809414-140809414 on Build GRCh38
205059	c.2068G>A	p.D690N	Chr.5: 140809255-140809255 on Build GRCh38
6168953	c.2189G>C	p.G730A	Chr.5: 140809376-140809376 on Build GRCh38
1754034	c.2191G>C	p.A731P	Chr.5: 140809378-140809378 on Build GRCh38
4452948	c.2351A>T	p.D784V	Chr.5: 140809538-140809538 on Build GRCh38
3850880	c.2276G>A	p.C759Y	Chr.5: 140809463-140809463 on Build GRCh38
4900481	c.2238G>A	p.G746G	Chr.5: 140809425-140809425 on Build GRCh38
6168952	c.2257C>T	p.Q753*	Chr.5: 140809444-140809444 on Build GRCh38
6101724	c.2309T>C	p.M770T	Chr.5: 140809496-140809496 on Build GRCh38
3609669	c.1991C>T	p.T664I	Chr.5: 140809178-140809178 on Build GRCh38
1310625	c.2202G>A	p.P734P	Chr.5: 140809389-140809389 on Build GRCh38
5486450	c.2190C>T	p.G730G	Chr.5: 140809377-140809377 on Build GRCh38
4959887	c.2013G>A	p.E671E	Chr.5: 140809200-140809200 on Build GRCh38
6261256	c.2220G>T	p.V740V	Chr.5: 140809407-140809407 on Build GRCh38
6101732	c.2027C>A	p.P676Q	Chr.5: 140809214-140809214 on Build GRCh38
4585468	c.2301C>T	p.T767T	Chr.5: 140809488-140809488 on Build GRCh38
3393190	c.2213C>T	p.T738M	Chr.5: 140809400-140809400 on Build GRCh38
4387697	c.2141C>T	p.T714M	Chr.5: 140809328-140809328 on Build GRCh38
5545552	c.2218G>A	p.V740M	Chr.5: 140809405-140809405 on Build GRCh38
3918815	c.2375C>T	p.S792F	Chr.5: 140809562-140809562 on Build GRCh38
3239952	c.2158G>A	p.A720T	Chr.5: 140809345-140809345 on Build GRCh38
1061968	c.2311G>T	p.A771S	Chr.5: 140809498-140809498 on Build GRCh38
5673739	c.2190C>A	p.G730G	Chr.5: 140809377-140809377 on Build GRCh38
125186	c.2134G>T	p.V712L	Chr.5: 140809321-140809321 on Build GRCh38
3239955	c.2191G>A	p.A731T	Chr.5: 140809378-140809378 on Build GRCh38
398592	c.2008G>A	p.V670M	Chr.5: 140809195-140809195 on Build GRCh38
1633990	c.2267C>T	p.P756L	Chr.5: 140809454-140809454 on Build GRCh38
6892905	c.2127C>T	p.S709S	Chr.5: 140809314-140809314 on Build GRCh38
6739751	c.2161C>T	p.L721L	Chr.5: 140809348-140809348 on Build GRCh38
3850876	c.2046G>A	p.A682A	Chr.5: 140809233-140809233 on Build GRCh38
337151	c.2075C>T	p.A692V	Chr.5: 140809262-140809262 on Build GRCh38
6224171	c.2313C>A	p.A771A	Chr.5: 140809500-140809500 on Build GRCh38
3850881	c.2276G>A	p.C759Y	Chr.5: 140809463-140809463 on Build GRCh38
213553	c.2117C>T	p.A706V	Chr.5: 140809304-140809304 on Build GRCh38
5673740	c.2190C>A	p.G730G	Chr.5: 140809377-140809377 on Build GRCh38
5060681	c.2201C>T	p.P734L	Chr.5: 140809388-140809388 on Build GRCh38
6739785	c.2370G>T	p.E790D	Chr.5: 140809557-140809557 on Build GRCh38
6261257	c.2220G>T	p.V740V	Chr.5: 140809407-140809407 on Build GRCh38
1633989	c.2267C>T	p.P756L	Chr.5: 140809454-140809454 on Build GRCh38
1310624	c.2202G>A	p.P734P	Chr.5: 140809389-140809389 on Build GRCh38
1486362	c.2134G>A	p.V712M	Chr.5: 140809321-140809321 on Build GRCh38
1061960	c.2028A>T	p.P676P	Chr.5: 140809215-140809215 on Build GRCh38
4440038	c.2301C>A	p.T767T	Chr.5: 140809488-140809488 on Build GRCh38
6101727	c.2286G>T	p.E762D	Chr.5: 140809473-140809473 on Build GRCh38
6989363	c.2169C>T	p.C723C	Chr.5: 140809356-140809356 on Build GRCh38
5588576	c.2124C>T	p.S708S	Chr.5: 140809311-140809311 on Build GRCh38
3918810	c.2192C>T	p.A731V	Chr.5: 140809379-140809379 on Build GRCh38
3609675	c.2128C>A	p.L710I	Chr.5: 140809315-140809315 on Build GRCh38
1061971	c.2345G>T	p.R782I	Chr.5: 140809532-140809532 on Build GRCh38
6198798	c.2142G>A	p.T714T	Chr.5: 140809329-140809329 on Build GRCh38
3609670	c.2043G>A	p.R681R	Chr.5: 140809230-140809230 on Build GRCh38
1261263	c.2115C>T	p.C705C	Chr.5: 140809302-140809302 on Build GRCh38
5545551	c.2218G>A	p.V740M	Chr.5: 140809405-140809405 on Build GRCh38
6739752	c.2161C>T	p.L721L	Chr.5: 140809348-140809348 on Build GRCh38
6432794	c.2149C>A	p.L717M	Chr.5: 140809336-140809336 on Build GRCh38
6168951	c.2257C>T	p.Q753*	Chr.5: 140809444-140809444 on Build GRCh38
337150	c.2075C>T	p.A692V	Chr.5: 140809262-140809262 on Build GRCh38
5486451	c.2190C>T	p.G730G	Chr.5: 140809377-140809377 on Build GRCh38
3850878	c.2118G>A	p.A706A	Chr.5: 140809305-140809305 on Build GRCh38
6248659	c.2168G>T	p.C723F	Chr.5: 140809355-140809355 on Build GRCh38
3393191	c.2213C>T	p.T738M	Chr.5: 140809400-140809400 on Build GRCh38
4003317	c.2119G>T	p.V707L	Chr.5: 140809306-140809306 on Build GRCh38
6892906	c.2127C>T	p.S709S	Chr.5: 140809314-140809314 on Build GRCh38
1061963	c.2189G>A	p.G730D	Chr.5: 140809376-140809376 on Build GRCh38
351144	c.2267C>A	p.P756Q	Chr.5: 140809454-140809454 on Build GRCh38
6101730	c.2174C>T	p.A725V	Chr.5: 140809361-140809361 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs781909645	Chr.5: 140809400-140809400 on Build GRCh38
rs782420889	Chr.5: 140809625-140809625 on Build GRCh38
rs782200079	Chr.5: 140809410-140809410 on Build GRCh38
rs782500159	Chr.5: 140809495-140809495 on Build GRCh38
rs782750036	Chr.5: 140809552-140809552 on Build GRCh38
rs138998178	Chr.5: 140809345-140809345 on Build GRCh38
rs782399688	Chr.5: 140809366-140809366 on Build GRCh38
rs782469870	Chr.5: 140809215-140809215 on Build GRCh38
rs782739291	Chr.5: 140809560-140809560 on Build GRCh38
rs782769972	Chr.5: 140809207-140809207 on Build GRCh38
rs782533943	Chr.5: 140809579-140809579 on Build GRCh38
rs138272102	Chr.5: 140809263-140809263 on Build GRCh38
rs781955144	Chr.5: 140809440-140809440 on Build GRCh38
rs782154101	Chr.5: 140809372-140809372 on Build GRCh38
rs543555386	Chr.5: 140809367-140809367 on Build GRCh38
rs782650472	Chr.5: 140809503-140809503 on Build GRCh38
rs375020779	Chr.5: 140809623-140809623 on Build GRCh38
rs781990363	Chr.5: 140809626-140809626 on Build GRCh38
rs782146620	Chr.5: 140809446-140809446 on Build GRCh38
rs782554104	Chr.5: 140809508-140809508 on Build GRCh38
rs782610697	Chr.5: 140809344-140809344 on Build GRCh38
rs782158465	Chr.5: 140809319-140809319 on Build GRCh38
rs782054971	Chr.5: 140809291-140809291 on Build GRCh38
rs782016802	Chr.5: 140809548-140809548 on Build GRCh38
rs565672389	Chr.5: 140809258-140809258 on Build GRCh38
rs376976270	Chr.5: 140809227-140809227 on Build GRCh38
rs781945067	Chr.5: 140809603-140809603 on Build GRCh38
rs1056049782	Chr.5: 140809640-140809640 on Build GRCh38
rs782747524	Chr.5: 140809221-140809221 on Build GRCh38
rs782439695	Chr.5: 140809272-140809272 on Build GRCh38
rs781869245	Chr.5: 140809333-140809333 on Build GRCh38
rs782355919	Chr.5: 140809254-140809254 on Build GRCh38
rs781791208	Chr.5: 140809476-140809476 on Build GRCh38
rs782047510	Chr.5: 140809392-140809392 on Build GRCh38
rs17844285	Chr.5: 140809306-140809306 on Build GRCh38
rs782448560	Chr.5: 140809477-140809477 on Build GRCh38
rs781832159	Chr.5: 140809389-140809389 on Build GRCh38
rs782714901	Chr.5: 140809388-140809388 on Build GRCh38
rs781870287	Chr.5: 140809555-140809555 on Build GRCh38
rs781990926	Chr.5: 140809277-140809277 on Build GRCh38
rs782686583	Chr.5: 140809361-140809361 on Build GRCh38
rs782288088	Chr.5: 140809234-140809234 on Build GRCh38
rs77547730	Chr.5: 140809378-140809378 on Build GRCh38
rs782495070	Chr.5: 140809242-140809242 on Build GRCh38
rs782301046	Chr.5: 140809445-140809445 on Build GRCh38
rs146943849	Chr.5: 140809455-140809455 on Build GRCh38
rs782233808	Chr.5: 140809589-140809589 on Build GRCh38
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