Product Details

Primer Sequences

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Primer Chromosome Location

Chr.11: 99819414-99819760 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CNTN5

Entrez Gene ID

53942

Gene Name

contactin 5

Gene Aliases

HNB-2s, NB-2

UniGene

Hs.656783

Gene Chromosome Location

Chr.11: 99020904-100358885 on Build GRCh38

Transcripts

NM_001243270.1 NM_001243271.1 NM_014361.3 NM_175566.2 XM_011542871.1 XM_011542873.1 XM_017017926.1 XM_017017927.1 XM_017017928.1 XM_017017929.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
3870494	c.122C>T	p.S41L	Chr.11: 99819610-99819610 on Build GRCh38
4592079	c.242A>G	p.N81S	Chr.11: 99819730-99819730 on Build GRCh38
690850	c.125C>G	p.S42C	Chr.11: 99819613-99819613 on Build GRCh38
3870493	c.122C>T	p.S41L	Chr.11: 99819610-99819610 on Build GRCh38
5360384	c.51-10delT	p.?	Chr.11: 99819529-99819529 on Build GRCh38
2062196	c.158G>A	p.R53Q	Chr.11: 99819646-99819646 on Build GRCh38
933718	c.51-2C>A	p.?	Chr.11: 99819537-99819537 on Build GRCh38
1127599	c.161A>C	p.Y54S	Chr.11: 99819649-99819649 on Build GRCh38
5662139	c.235C>A	p.P79T	Chr.11: 99819723-99819723 on Build GRCh38
5906876	c.169C>T	p.P57S	Chr.11: 99819657-99819657 on Build GRCh38
3454881	c.199C>T	p.P67S	Chr.11: 99819687-99819687 on Build GRCh38
6631809	c.114G>T	p.K38N	Chr.11: 99819602-99819602 on Build GRCh38
1146858	c.125C>G	p.S42C	Chr.11: 99819613-99819613 on Build GRCh38
3454873	c.68C>T	p.S23F	Chr.11: 99819556-99819556 on Build GRCh38
5790325	c.194C>T	p.S65F	Chr.11: 99819682-99819682 on Build GRCh38
3454884	c.250C>T	p.H84Y	Chr.11: 99819738-99819738 on Build GRCh38
3752833	c.231T>C	p.Y77Y	Chr.11: 99819719-99819719 on Build GRCh38
4037826	c.98C>A	p.A33D	Chr.11: 99819586-99819586 on Build GRCh38
2062195	c.158G>A	p.R53Q	Chr.11: 99819646-99819646 on Build GRCh38
5839863	c.128C>T	p.S43L	Chr.11: 99819616-99819616 on Build GRCh38
3454876	c.105A>G	p.L35L	Chr.11: 99819593-99819593 on Build GRCh38
6135063	c.213G>C	p.G71G	Chr.11: 99819701-99819701 on Build GRCh38
3986561	c.148A>C	p.T50P	Chr.11: 99819636-99819636 on Build GRCh38
5638427	c.203G>C	p.S68T	Chr.11: 99819691-99819691 on Build GRCh38
5942372	c.119G>C	p.S40T	Chr.11: 99819607-99819607 on Build GRCh38
4913013	c.186G>T	p.L62L	Chr.11: 99819674-99819674 on Build GRCh38
4673332	c.170C>A	p.P57H	Chr.11: 99819658-99819658 on Build GRCh38
5603237	c.254C>T	p.S85F	Chr.11: 99819742-99819742 on Build GRCh38
690849	c.233C>T	p.S78F	Chr.11: 99819721-99819721 on Build GRCh38
5839864	c.128C>T	p.S43L	Chr.11: 99819616-99819616 on Build GRCh38
2062194	c.125C>T	p.S42F	Chr.11: 99819613-99819613 on Build GRCh38
4037827	c.98C>A	p.A33D	Chr.11: 99819586-99819586 on Build GRCh38
3454879	c.179G>A	p.G60E	Chr.11: 99819667-99819667 on Build GRCh38
5638428	c.203G>C	p.S68T	Chr.11: 99819691-99819691 on Build GRCh38
3454871	c.57G>A	p.E19E	Chr.11: 99819545-99819545 on Build GRCh38
3454882	c.199C>T	p.P67S	Chr.11: 99819687-99819687 on Build GRCh38
2062193	c.125C>T	p.S42F	Chr.11: 99819613-99819613 on Build GRCh38
3986562	c.148A>C	p.T50P	Chr.11: 99819636-99819636 on Build GRCh38
3454874	c.68C>T	p.S23F	Chr.11: 99819556-99819556 on Build GRCh38
4673333	c.170C>A	p.P57H	Chr.11: 99819658-99819658 on Build GRCh38
6135061	c.236C>G	p.P79R	Chr.11: 99819724-99819724 on Build GRCh38
394620	c.152G>A	p.R51K	Chr.11: 99819640-99819640 on Build GRCh38
3721299	c.64A>G	p.K22E	Chr.11: 99819552-99819552 on Build GRCh38
3931470	c.209T>G	p.L70R	Chr.11: 99819697-99819697 on Build GRCh38
4400407	c.213G>A	p.G71G	Chr.11: 99819701-99819701 on Build GRCh38
4673330	c.68C>A	p.S23Y	Chr.11: 99819556-99819556 on Build GRCh38
7291230	c.62C>A	p.S21*	Chr.11: 99819550-99819550 on Build GRCh38
1476010	c.67T>G	p.S23A	Chr.11: 99819555-99819555 on Build GRCh38
4881547	c.235C>T	p.P79S	Chr.11: 99819723-99819723 on Build GRCh38
7291231	c.62C>A	p.S21*	Chr.11: 99819550-99819550 on Build GRCh38
4400406	c.213G>A	p.G71G	Chr.11: 99819701-99819701 on Build GRCh38
4844377	c.107G>C	p.R36T	Chr.11: 99819595-99819595 on Build GRCh38
1586112	c.56-7C>A	p.?	Chr.11: 99819537-99819537 on Build GRCh38
2062190	c.89C>T	p.S30L	Chr.11: 99819577-99819577 on Build GRCh38
5341831	c.81C>T	p.L27L	Chr.11: 99819569-99819569 on Build GRCh38
6135064	c.213G>C	p.G71G	Chr.11: 99819701-99819701 on Build GRCh38
3454877	c.111T>G	p.I37M	Chr.11: 99819599-99819599 on Build GRCh38
4881546	c.235C>T	p.P79S	Chr.11: 99819723-99819723 on Build GRCh38
5942373	c.119G>C	p.S40T	Chr.11: 99819607-99819607 on Build GRCh38
4844376	c.107G>C	p.R36T	Chr.11: 99819595-99819595 on Build GRCh38
3454880	c.179G>A	p.G60E	Chr.11: 99819667-99819667 on Build GRCh38
5341830	c.81C>T	p.L27L	Chr.11: 99819569-99819569 on Build GRCh38
2062189	c.89C>T	p.S30L	Chr.11: 99819577-99819577 on Build GRCh38
4673331	c.68C>A	p.S23Y	Chr.11: 99819556-99819556 on Build GRCh38
3454872	c.57G>A	p.E19E	Chr.11: 99819545-99819545 on Build GRCh38
3721298	c.64A>G	p.K22E	Chr.11: 99819552-99819552 on Build GRCh38
5906877	c.169C>T	p.P57S	Chr.11: 99819657-99819657 on Build GRCh38
3710285	c.173C>T	p.S58L	Chr.11: 99819661-99819661 on Build GRCh38
3935690	c.122C>A	p.S41*	Chr.11: 99819610-99819610 on Build GRCh38
3398231	c.213G>T	p.G71G	Chr.11: 99819701-99819701 on Build GRCh38
5645133	c.246T>C	p.L82L	Chr.11: 99819734-99819734 on Build GRCh38
1510443	c.140G>T	p.G47V	Chr.11: 99819628-99819628 on Build GRCh38
3931468	c.157C>T	p.R53*	Chr.11: 99819645-99819645 on Build GRCh38
3931469	c.209T>G	p.L70R	Chr.11: 99819697-99819697 on Build GRCh38
6055451	c.237C>A	p.P79P	Chr.11: 99819725-99819725 on Build GRCh38
1510444	c.140G>T	p.G47V	Chr.11: 99819628-99819628 on Build GRCh38
3870496	c.139G>A	p.G47S	Chr.11: 99819627-99819627 on Build GRCh38
6631810	c.114G>T	p.K38N	Chr.11: 99819602-99819602 on Build GRCh38
3870495	c.139G>A	p.G47S	Chr.11: 99819627-99819627 on Build GRCh38
6135062	c.236C>G	p.P79R	Chr.11: 99819724-99819724 on Build GRCh38
3454883	c.250C>T	p.H84Y	Chr.11: 99819738-99819738 on Build GRCh38
4913012	c.186G>T	p.L62L	Chr.11: 99819674-99819674 on Build GRCh38
5645134	c.246T>C	p.L82L	Chr.11: 99819734-99819734 on Build GRCh38
3454875	c.105A>G	p.L35L	Chr.11: 99819593-99819593 on Build GRCh38
6055450	c.237C>A	p.P79P	Chr.11: 99819725-99819725 on Build GRCh38
1146859	c.233C>T	p.S78F	Chr.11: 99819721-99819721 on Build GRCh38
3454878	c.111T>G	p.I37M	Chr.11: 99819599-99819599 on Build GRCh38
3752834	c.231T>C	p.Y77Y	Chr.11: 99819719-99819719 on Build GRCh38
84106	c.188G>T	p.S63I	Chr.11: 99819676-99819676 on Build GRCh38
5603238	c.254C>T	p.S85F	Chr.11: 99819742-99819742 on Build GRCh38
5662138	c.235C>A	p.P79T	Chr.11: 99819723-99819723 on Build GRCh38
4592080	c.242A>G	p.N81S	Chr.11: 99819730-99819730 on Build GRCh38
3710284	c.173C>T	p.S58L	Chr.11: 99819661-99819661 on Build GRCh38
3935689	c.122C>A	p.S41*	Chr.11: 99819610-99819610 on Build GRCh38
430127	c.67T>G	p.S23A	Chr.11: 99819555-99819555 on Build GRCh38
5790324	c.194C>T	p.S65F	Chr.11: 99819682-99819682 on Build GRCh38
3931467	c.157C>T	p.R53*	Chr.11: 99819645-99819645 on Build GRCh38
3398232	c.213G>T	p.G71G	Chr.11: 99819701-99819701 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs758053014	Chr.11: 99819733-99819733 on Build GRCh38
rs756903722	Chr.11: 99819666-99819666 on Build GRCh38
rs201399847	Chr.11: 99819703-99819703 on Build GRCh38
rs199786366	Chr.11: 99819484-99819484 on Build GRCh38
rs199920688	Chr.11: 99819560-99819560 on Build GRCh38
rs746426286	Chr.11: 99819542-99819542 on Build GRCh38
rs532915134	Chr.11: 99819552-99819552 on Build GRCh38
rs202035562	Chr.11: 99819564-99819564 on Build GRCh38
rs757789255	Chr.11: 99819538-99819538 on Build GRCh38
rs753301950	Chr.11: 99819725-99819725 on Build GRCh38
rs7125822	Chr.11: 99819697-99819697 on Build GRCh38
rs372476071	Chr.11: 99819533-99819533 on Build GRCh38
rs200788939	Chr.11: 99819735-99819735 on Build GRCh38
rs769441323	Chr.11: 99819551-99819551 on Build GRCh38
rs770692990	Chr.11: 99819617-99819617 on Build GRCh38
rs775243907	Chr.11: 99819553-99819554 on Build GRCh38
rs755046611	Chr.11: 99819522-99819522 on Build GRCh38
rs760918286	Chr.11: 99819571-99819571 on Build GRCh38
rs369959040	Chr.11: 99819528-99819528 on Build GRCh38
rs867939537	Chr.11: 99819705-99819705 on Build GRCh38
rs376713995	Chr.11: 99819527-99819527 on Build GRCh38
rs759322436	Chr.11: 99819625-99819625 on Build GRCh38
rs374794794	Chr.11: 99819616-99819616 on Build GRCh38
rs200572550	Chr.11: 99819702-99819702 on Build GRCh38
rs367832129	Chr.11: 99819502-99819502 on Build GRCh38
rs202073412	Chr.11: 99819736-99819736 on Build GRCh38
rs200637003	Chr.11: 99819722-99819722 on Build GRCh38
rs756168987	Chr.11: 99819461-99819461 on Build GRCh38
rs775466035	Chr.11: 99819671-99819671 on Build GRCh38
rs12292548	Chr.11: 99819481-99819481 on Build GRCh38
rs202004805	Chr.11: 99819595-99819595 on Build GRCh38
rs774266423	Chr.11: 99819619-99819619 on Build GRCh38
rs765004879	Chr.11: 99819496-99819496 on Build GRCh38
rs201682523	Chr.11: 99819726-99819726 on Build GRCh38
rs753357501	Chr.11: 99819690-99819690 on Build GRCh38
rs775378819	Chr.11: 99819630-99819630 on Build GRCh38
rs1012593226	Chr.11: 99819485-99819485 on Build GRCh38
rs369643416	Chr.11: 99819567-99819567 on Build GRCh38
rs202208723	Chr.11: 99819658-99819658 on Build GRCh38
rs764309266	Chr.11: 99819634-99819634 on Build GRCh38
rs754214109	Chr.11: 99819583-99819583 on Build GRCh38
rs746937022	Chr.11: 99819699-99819699 on Build GRCh38
rs201117922	Chr.11: 99819612-99819612 on Build GRCh38
rs200581115	Chr.11: 99819563-99819563 on Build GRCh38
rs779593509	Chr.11: 99819539-99819539 on Build GRCh38
rs12292659	Chr.11: 99819645-99819645 on Build GRCh38
rs752042635	Chr.11: 99819685-99819685 on Build GRCh38
rs7105653	Chr.11: 99819456-99819456 on Build GRCh38
rs200519976	Chr.11: 99819682-99819682 on Build GRCh38
rs768279431	Chr.11: 99819587-99819587 on Build GRCh38
rs541792239	Chr.11: 99819453-99819453 on Build GRCh38
rs776491575	Chr.11: 99819721-99819721 on Build GRCh38
rs529404054	Chr.11: 99819627-99819627 on Build GRCh38
rs768027790	Chr.11: 99819545-99819545 on Build GRCh38
rs780502497	Chr.11: 99819607-99819607 on Build GRCh38
rs201422329	Chr.11: 99819683-99819683 on Build GRCh38
rs755593251	Chr.11: 99819653-99819653 on Build GRCh38
rs200679586	Chr.11: 99819523-99819523 on Build GRCh38
rs767487705	Chr.11: 99819565-99819565 on Build GRCh38
rs777315487	Chr.11: 99819654-99819654 on Build GRCh38
rs759012669	Chr.11: 99819599-99819599 on Build GRCh38
rs777437500	Chr.11: 99819613-99819613 on Build GRCh38
rs748932737	Chr.11: 99819663-99819663 on Build GRCh38
rs944995336	Chr.11: 99819651-99819651 on Build GRCh38
rs199950154	Chr.11: 99819476-99819476 on Build GRCh38
rs747751684	Chr.11: 99819548-99819548 on Build GRCh38
rs771826877	Chr.11: 99819530-99819531 on Build GRCh38
rs745546818	Chr.11: 99819696-99819696 on Build GRCh38
rs752165707	Chr.11: 99819646-99819646 on Build GRCh38
rs762182166	Chr.11: 99819641-99819641 on Build GRCh38
rs766320825	Chr.11: 99819508-99819508 on Build GRCh38
rs749249067	Chr.11: 99819448-99819448 on Build GRCh38
rs763136607	Chr.11: 99819718-99819718 on Build GRCh38
rs202179266	Chr.11: 99819642-99819642 on Build GRCh38
rs757664109	Chr.11: 99819588-99819588 on Build GRCh38
rs745694465	Chr.11: 99819670-99819670 on Build GRCh38
rs745428164	Chr.11: 99819528-99819529 on Build GRCh38
rs764702381	Chr.11: 99819729-99819729 on Build GRCh38
rs780813895	Chr.11: 99819547-99819547 on Build GRCh38
rs768210733	Chr.11: 99819665-99819665 on Build GRCh38
rs200685098	Chr.11: 99819504-99819504 on Build GRCh38
rs199701621	Chr.11: 99819519-99819519 on Build GRCh38
rs756806886	Chr.11: 99819692-99819692 on Build GRCh38
rs754089407	Chr.11: 99819638-99819638 on Build GRCh38
rs199945392	Chr.11: 99819604-99819604 on Build GRCh38
rs760869154	Chr.11: 99819632-99819632 on Build GRCh38
rs201383460	Chr.11: 99819509-99819509 on Build GRCh38
rs10893933	Chr.11: 99819730-99819730 on Build GRCh38
rs768030519	Chr.11: 99819723-99819723 on Build GRCh38
rs185691534	Chr.11: 99819474-99819474 on Build GRCh38
rs769870676	Chr.11: 99819715-99819715 on Build GRCh38
rs10790978	Chr.11: 99819555-99819555 on Build GRCh38
rs201084279	Chr.11: 99819594-99819594 on Build GRCh38
rs200129740	Chr.11: 99819569-99819569 on Build GRCh38
rs201386179	Chr.11: 99819652-99819652 on Build GRCh38
rs761355116	Chr.11: 99819728-99819728 on Build GRCh38
rs776919813	Chr.11: 99819673-99819673 on Build GRCh38
rs552066224	Chr.11: 99819687-99819687 on Build GRCh38
rs765510767	Chr.11: 99819676-99819676 on Build GRCh38
rs537629421	Chr.11: 99819716-99819716 on Build GRCh38
rs745803839	Chr.11: 99819500-99819500 on Build GRCh38
rs778655565	Chr.11: 99819693-99819693 on Build GRCh38
rs746681632	Chr.11: 99819566-99819567 on Build GRCh38
rs565909092	Chr.11: 99819643-99819643 on Build GRCh38
rs778212750	Chr.11: 99819530-99819530 on Build GRCh38
rs1054639707	Chr.11: 99819470-99819470 on Build GRCh38
rs764432285	Chr.11: 99819580-99819580 on Build GRCh38
rs879012990	Chr.11: 99819443-99819445 on Build GRCh38
rs868836971	Chr.11: 99819577-99819577 on Build GRCh38
rs201201223	Chr.11: 99819711-99819711 on Build GRCh38
rs747707558	Chr.11: 99819611-99819611 on Build GRCh38
rs778510250	Chr.11: 99819667-99819667 on Build GRCh38

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