Product Details

Primer Sequences

Log in to view

Primer Chromosome Location

Chr.5: 140856241-140856494 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

PCDHA1

Entrez Gene ID

56147

Gene Name

protocadherin alpha 1

Gene Aliases

PCDH-ALPHA1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140786136-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA10

Entrez Gene ID

56139

Gene Name

protocadherin alpha 10

Gene Aliases

CNR8, CNRN8, CNRS8, CRNR8, PCDH-ALPHA10

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140855883-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA2

Entrez Gene ID

56146

Gene Name

protocadherin alpha 2

Gene Aliases

PCDH-ALPHA2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140794859-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA3

Entrez Gene ID

56145

Gene Name

protocadherin alpha 3

Gene Aliases

PCDH-ALPHA3

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140801198-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA4

Entrez Gene ID

56144

Gene Name

protocadherin alpha 4

Gene Aliases

CNR1, CNRN1, CRNR1, PCDH-ALPHA4

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140807074-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA5

Entrez Gene ID

56143

Gene Name

protocadherin alpha 5

Gene Aliases

CNR6, CNRN6, CNRS6, CRNR6, PCDH-ALPHA5

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140821776-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA6

Entrez Gene ID

56142

Gene Name

protocadherin alpha 6

Gene Aliases

CNR2, CNRN2, CNRS2, CRNR2, PCDH-ALPHA6

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140827922-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA7

Entrez Gene ID

56141

Gene Name

protocadherin alpha 7

Gene Aliases

CNR4, CNRN4, CNRS4, CRNR4, PCDH-ALPHA7

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140834384-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA8

Entrez Gene ID

56140

Gene Name

protocadherin alpha 8

Gene Aliases

PCDH-ALPHA8

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140841322-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA9

Entrez Gene ID

9752

Gene Name

protocadherin alpha 9

Gene Aliases

PCDH-ALPHA9

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140847772-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031859.2 NM_031860.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Cosmic Detail

View Less

Cosmic ID	Mutation	AA	Transcript Location
5545549	c.395T>C	p.F132S	Chr.5: 140856443-140856443 on Build GRCh38
125179	c.310C>A	p.H104N	Chr.5: 140856358-140856358 on Build GRCh38
5966476	c.357C>G	p.D119E	Chr.5: 140856405-140856405 on Build GRCh38
4425680	c.291G>C	p.R97R	Chr.5: 140856339-140856339 on Build GRCh38
3240752	c.285C>T	p.C95C	Chr.5: 140856333-140856333 on Build GRCh38
5966474	c.357C>G	p.D119E	Chr.5: 140856405-140856405 on Build GRCh38
736171	c.264G>T	p.R88R	Chr.5: 140856312-140856312 on Build GRCh38
5536560	c.385C>T	p.P129S	Chr.5: 140856433-140856433 on Build GRCh38
6169210	c.210C>T	p.H70H	Chr.5: 140856258-140856258 on Build GRCh38
3851098	c.446C>A	p.S149Y	Chr.5: 140856494-140856494 on Build GRCh38
1329068	c.427G>C	p.E143Q	Chr.5: 140856475-140856475 on Build GRCh38
233053	c.212G>A	p.G71E	Chr.5: 140856260-140856260 on Build GRCh38
6383699	c.238A>T	p.N80Y	Chr.5: 140856286-140856286 on Build GRCh38
4397891	c.274G>A	p.E92K	Chr.5: 140856322-140856322 on Build GRCh38
5567034	c.272G>A	p.R91H	Chr.5: 140856320-140856320 on Build GRCh38
262759	c.369G>T	p.K123N	Chr.5: 140856417-140856417 on Build GRCh38
1594830	c.358G>A	p.V120M	Chr.5: 140856406-140856406 on Build GRCh38
5536561	c.385C>T	p.P129S	Chr.5: 140856433-140856433 on Build GRCh38
3610055	c.399C>T	p.S133S	Chr.5: 140856447-140856447 on Build GRCh38
736172	c.264G>T	p.R88R	Chr.5: 140856312-140856312 on Build GRCh38
3610047	c.296T>C	p.V99A	Chr.5: 140856344-140856344 on Build GRCh38
5536559	c.385C>T	p.P129S	Chr.5: 140856433-140856433 on Build GRCh38
3610043	c.286G>C	p.G96R	Chr.5: 140856334-140856334 on Build GRCh38
4425682	c.291G>C	p.R97R	Chr.5: 140856339-140856339 on Build GRCh38
6383697	c.238A>T	p.N80Y	Chr.5: 140856286-140856286 on Build GRCh38
4397889	c.274G>A	p.E92K	Chr.5: 140856322-140856322 on Build GRCh38
3610045	c.296T>C	p.V99A	Chr.5: 140856344-140856344 on Build GRCh38
7124065	c.262C>G	p.R88G	Chr.5: 140856310-140856310 on Build GRCh38
4712046	c.400G>A	p.V134I	Chr.5: 140856448-140856448 on Build GRCh38
6169212	c.210C>T	p.H70H	Chr.5: 140856258-140856258 on Build GRCh38
6263462	c.363A>G	p.E121E	Chr.5: 140856411-140856411 on Build GRCh38
3240749	c.277G>A	p.E93K	Chr.5: 140856325-140856325 on Build GRCh38
7111361	c.262C>T	p.R88W	Chr.5: 140856310-140856310 on Build GRCh38
5000277	c.436C>A	p.L146M	Chr.5: 140856484-140856484 on Build GRCh38
6263461	c.363A>G	p.E121E	Chr.5: 140856411-140856411 on Build GRCh38
7111362	c.262C>T	p.R88W	Chr.5: 140856310-140856310 on Build GRCh38
3610052	c.348C>T	p.F116F	Chr.5: 140856396-140856396 on Build GRCh38
3610044	c.286G>C	p.G96R	Chr.5: 140856334-140856334 on Build GRCh38
4712047	c.400G>A	p.V134I	Chr.5: 140856448-140856448 on Build GRCh38
3610040	c.223G>A	p.E75K	Chr.5: 140856271-140856271 on Build GRCh38
3610054	c.399C>T	p.S133S	Chr.5: 140856447-140856447 on Build GRCh38
6169207	c.290G>T	p.R97L	Chr.5: 140856338-140856338 on Build GRCh38
3240753	c.285C>T	p.C95C	Chr.5: 140856333-140856333 on Build GRCh38
3610042	c.286G>C	p.G96R	Chr.5: 140856334-140856334 on Build GRCh38
3610056	c.399C>T	p.S133S	Chr.5: 140856447-140856447 on Build GRCh38
4712048	c.400G>A	p.V134I	Chr.5: 140856448-140856448 on Build GRCh38
5000278	c.436C>A	p.L146M	Chr.5: 140856484-140856484 on Build GRCh38
6263463	c.363A>G	p.E121E	Chr.5: 140856411-140856411 on Build GRCh38
3240751	c.285C>T	p.C95C	Chr.5: 140856333-140856333 on Build GRCh38
6383698	c.238A>T	p.N80Y	Chr.5: 140856286-140856286 on Build GRCh38
7111363	c.262C>T	p.R88W	Chr.5: 140856310-140856310 on Build GRCh38
5567035	c.272G>A	p.R91H	Chr.5: 140856320-140856320 on Build GRCh38
4712043	c.387G>A	p.P129P	Chr.5: 140856435-140856435 on Build GRCh38
142964	c.424_425CC>TT	p.P142F	Chr.5: 140856472-140856473 on Build GRCh38
7124064	c.262C>G	p.R88G	Chr.5: 140856310-140856310 on Build GRCh38
1062272	c.358G>A	p.V120M	Chr.5: 140856406-140856406 on Build GRCh38
6257916	c.414G>T	p.K138N	Chr.5: 140856462-140856462 on Build GRCh38
1329069	c.427G>C	p.E143Q	Chr.5: 140856475-140856475 on Build GRCh38
370894	c.347T>C	p.F116S	Chr.5: 140856395-140856395 on Build GRCh38
3610053	c.348C>T	p.F116F	Chr.5: 140856396-140856396 on Build GRCh38
6169211	c.210C>T	p.H70H	Chr.5: 140856258-140856258 on Build GRCh38
4712044	c.387G>A	p.P129P	Chr.5: 140856435-140856435 on Build GRCh38
3610049	c.316G>A	p.E106K	Chr.5: 140856364-140856364 on Build GRCh38
262760	c.369G>T	p.K123N	Chr.5: 140856417-140856417 on Build GRCh38
3851097	c.446C>A	p.S149Y	Chr.5: 140856494-140856494 on Build GRCh38
3610041	c.223G>A	p.E75K	Chr.5: 140856271-140856271 on Build GRCh38
7124063	c.262C>G	p.R88G	Chr.5: 140856310-140856310 on Build GRCh38
3240750	c.277G>A	p.E93K	Chr.5: 140856325-140856325 on Build GRCh38
6169209	c.290G>T	p.R97L	Chr.5: 140856338-140856338 on Build GRCh38
6257917	c.414G>T	p.K138N	Chr.5: 140856462-140856462 on Build GRCh38
5567033	c.272G>A	p.R91H	Chr.5: 140856320-140856320 on Build GRCh38
5545550	c.395T>C	p.F132S	Chr.5: 140856443-140856443 on Build GRCh38
3610051	c.348C>T	p.F116F	Chr.5: 140856396-140856396 on Build GRCh38
1062271	c.358G>A	p.V120M	Chr.5: 140856406-140856406 on Build GRCh38
4425681	c.291G>C	p.R97R	Chr.5: 140856339-140856339 on Build GRCh38
5545548	c.395T>C	p.F132S	Chr.5: 140856443-140856443 on Build GRCh38
3610039	c.223G>A	p.E75K	Chr.5: 140856271-140856271 on Build GRCh38
6257918	c.414G>T	p.K138N	Chr.5: 140856462-140856462 on Build GRCh38
5604424	c.446C>T	p.S149F	Chr.5: 140856494-140856494 on Build GRCh38
4712045	c.387G>A	p.P129P	Chr.5: 140856435-140856435 on Build GRCh38
5966475	c.357C>G	p.D119E	Chr.5: 140856405-140856405 on Build GRCh38
3851099	c.446C>A	p.S149Y	Chr.5: 140856494-140856494 on Build GRCh38
3240748	c.277G>A	p.E93K	Chr.5: 140856325-140856325 on Build GRCh38
1062270	c.324C>T	p.I108I	Chr.5: 140856372-140856372 on Build GRCh38
5604423	c.446C>T	p.S149F	Chr.5: 140856494-140856494 on Build GRCh38
142963	c.424_425CC>TT	p.P142F	Chr.5: 140856472-140856473 on Build GRCh38
5000276	c.436C>A	p.L146M	Chr.5: 140856484-140856484 on Build GRCh38
4492522	c.399C>G	p.S133S	Chr.5: 140856447-140856447 on Build GRCh38
125180	c.310C>A	p.H104N	Chr.5: 140856358-140856358 on Build GRCh38
3610050	c.316G>A	p.E106K	Chr.5: 140856364-140856364 on Build GRCh38
6169208	c.290G>T	p.R97L	Chr.5: 140856338-140856338 on Build GRCh38
4492521	c.399C>G	p.S133S	Chr.5: 140856447-140856447 on Build GRCh38
3610046	c.296T>C	p.V99A	Chr.5: 140856344-140856344 on Build GRCh38
233052	c.212G>A	p.G71E	Chr.5: 140856260-140856260 on Build GRCh38
5604422	c.446C>T	p.S149F	Chr.5: 140856494-140856494 on Build GRCh38
3610048	c.316G>A	p.E106K	Chr.5: 140856364-140856364 on Build GRCh38
4397890	c.274G>A	p.E92K	Chr.5: 140856322-140856322 on Build GRCh38
1062269	c.324C>T	p.I108I	Chr.5: 140856372-140856372 on Build GRCh38
4492523	c.399C>G	p.S133S	Chr.5: 140856447-140856447 on Build GRCh38

View More

SNP Detail

SNP ID	Chromosome Location
rs782173275	Chr.5: 140856431-140856431 on Build GRCh38
rs782670614	Chr.5: 140856428-140856428 on Build GRCh38
rs544932528	Chr.5: 140856321-140856321 on Build GRCh38
rs782323132	Chr.5: 140856305-140856305 on Build GRCh38
rs782430101	Chr.5: 140856372-140856372 on Build GRCh38
rs782635462	Chr.5: 140856281-140856281 on Build GRCh38
rs782325790	Chr.5: 140856295-140856295 on Build GRCh38
rs782418117	Chr.5: 140856432-140856432 on Build GRCh38
rs200204071	Chr.5: 140856318-140856318 on Build GRCh38
rs782584293	Chr.5: 140856341-140856341 on Build GRCh38
rs782447462	Chr.5: 140856403-140856403 on Build GRCh38
rs200722492	Chr.5: 140856425-140856425 on Build GRCh38
rs782568790	Chr.5: 140856315-140856315 on Build GRCh38
rs782335067	Chr.5: 140856344-140856344 on Build GRCh38
rs782392908	Chr.5: 140856448-140856448 on Build GRCh38
rs202075661	Chr.5: 140856384-140856384 on Build GRCh38
rs1053203263	Chr.5: 140856383-140856383 on Build GRCh38
rs782782390	Chr.5: 140856337-140856337 on Build GRCh38
rs190288099	Chr.5: 140856385-140856385 on Build GRCh38
rs199611545	Chr.5: 140856347-140856347 on Build GRCh38
rs781846770	Chr.5: 140856323-140856323 on Build GRCh38
rs782472888	Chr.5: 140856271-140856271 on Build GRCh38
rs782279735	Chr.5: 140856463-140856463 on Build GRCh38
rs782180138	Chr.5: 140856292-140856292 on Build GRCh38
rs782109045	Chr.5: 140856427-140856427 on Build GRCh38
rs782271561	Chr.5: 140856369-140856369 on Build GRCh38
rs367902357	Chr.5: 140856269-140856269 on Build GRCh38
rs782124565	Chr.5: 140856394-140856394 on Build GRCh38
rs138367057	Chr.5: 140856289-140856289 on Build GRCh38
rs781914523	Chr.5: 140856373-140856373 on Build GRCh38
rs782470045	Chr.5: 140856418-140856418 on Build GRCh38
rs782195215	Chr.5: 140856375-140856375 on Build GRCh38
rs782023286	Chr.5: 140856399-140856399 on Build GRCh38
rs782092511	Chr.5: 140856319-140856319 on Build GRCh38
rs781808272	Chr.5: 140856411-140856411 on Build GRCh38
rs782497272	Chr.5: 140856356-140856356 on Build GRCh38
rs782661319	Chr.5: 140856364-140856364 on Build GRCh38
rs782114957	Chr.5: 140856304-140856304 on Build GRCh38
rs1030293372	Chr.5: 140856468-140856468 on Build GRCh38
rs782709201	Chr.5: 140856406-140856406 on Build GRCh38
rs782595746	Chr.5: 140856286-140856286 on Build GRCh38
rs782776522	Chr.5: 140856397-140856397 on Build GRCh38
rs782438318	Chr.5: 140856471-140856471 on Build GRCh38
rs782445424	Chr.5: 140856260-140856260 on Build GRCh38
rs377709063	Chr.5: 140856426-140856426 on Build GRCh38
rs782387382	Chr.5: 140856310-140856310 on Build GRCh38
rs199720508	Chr.5: 140856413-140856413 on Build GRCh38
rs377602570	Chr.5: 140856297-140856297 on Build GRCh38
rs551569829	Chr.5: 140856434-140856434 on Build GRCh38
rs782383115	Chr.5: 140856448-140856448 on Build GRCh38
rs568319142	Chr.5: 140856374-140856374 on Build GRCh38
rs782523397	Chr.5: 140856336-140856336 on Build GRCh38
rs782164641	Chr.5: 140856401-140856401 on Build GRCh38
rs566691333	Chr.5: 140856459-140856459 on Build GRCh38
rs199529084	Chr.5: 140856259-140856259 on Build GRCh38
rs782582964	Chr.5: 140856261-140856261 on Build GRCh38
rs782213392	Chr.5: 140856451-140856451 on Build GRCh38
rs781903292	Chr.5: 140856338-140856338 on Build GRCh38

View Full Product Details