Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 140875667-140875938 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

PCDHA1

Entrez Gene ID

56147

Gene Name

protocadherin alpha 1

Gene Aliases

PCDH-ALPHA1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140786136-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA10

Entrez Gene ID

56139

Gene Name

protocadherin alpha 10

Gene Aliases

CNR8, CNRN8, CNRS8, CRNR8, PCDH-ALPHA10

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140855883-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA11

Entrez Gene ID

56138

Gene Name

protocadherin alpha 11

Gene Aliases

CNR7, CNRN7, CNRS7, CRNR7, PCDH-ALPHA11

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140867513-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA12

Entrez Gene ID

56137

Gene Name

protocadherin alpha 12

Gene Aliases

PCDH-ALPHA12

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140875302-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA2

Entrez Gene ID

56146

Gene Name

protocadherin alpha 2

Gene Aliases

PCDH-ALPHA2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140794859-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA3

Entrez Gene ID

56145

Gene Name

protocadherin alpha 3

Gene Aliases

PCDH-ALPHA3

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140801198-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA4

Entrez Gene ID

56144

Gene Name

protocadherin alpha 4

Gene Aliases

CNR1, CNRN1, CRNR1, PCDH-ALPHA4

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140807074-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA5

Entrez Gene ID

56143

Gene Name

protocadherin alpha 5

Gene Aliases

CNR6, CNRN6, CNRS6, CRNR6, PCDH-ALPHA5

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140821776-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA6

Entrez Gene ID

56142

Gene Name

protocadherin alpha 6

Gene Aliases

CNR2, CNRN2, CNRS2, CRNR2, PCDH-ALPHA6

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140827922-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA7

Entrez Gene ID

56141

Gene Name

protocadherin alpha 7

Gene Aliases

CNR4, CNRN4, CNRS4, CRNR4, PCDH-ALPHA7

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140834384-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA8

Entrez Gene ID

56140

Gene Name

protocadherin alpha 8

Gene Aliases

PCDH-ALPHA8

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140841322-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA9

Entrez Gene ID

9752

Gene Name

protocadherin alpha 9

Gene Aliases

PCDH-ALPHA9

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140847772-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
5651549	c.305G>A	p.C102Y	Chr.5: 140875777-140875777 on Build GRCh38
1541914	c.438G>A	p.A146A	Chr.5: 140875910-140875910 on Build GRCh38
6739581	c.393G>A	p.P131P	Chr.5: 140875865-140875865 on Build GRCh38
4585502	c.243T>C	p.N81N	Chr.5: 140875715-140875715 on Build GRCh38
5128857	c.276C>T	p.R92R	Chr.5: 140875748-140875748 on Build GRCh38
1261243	c.201G>A	p.A67A	Chr.5: 140875673-140875673 on Build GRCh38
3241142	c.258G>A	p.V86V	Chr.5: 140875730-140875730 on Build GRCh38
6896297	c.235C>T	p.L79L	Chr.5: 140875707-140875707 on Build GRCh38
4542512	c.319G>A	p.E107K	Chr.5: 140875791-140875791 on Build GRCh38
5103762	c.213C>T	p.H71H	Chr.5: 140875685-140875685 on Build GRCh38
5402364	c.270C>T	p.I90I	Chr.5: 140875742-140875742 on Build GRCh38
4712106	c.360C>T	p.D120D	Chr.5: 140875832-140875832 on Build GRCh38
1062336	c.372G>T	p.K124N	Chr.5: 140875844-140875844 on Build GRCh38
7118406	c.460C>G	p.L154V	Chr.5: 140875932-140875932 on Build GRCh38
5356426	c.339G>A	p.P113P	Chr.5: 140875811-140875811 on Build GRCh38
1062334	c.275G>A	p.R92H	Chr.5: 140875747-140875747 on Build GRCh38
4400538	c.327C>T	p.I109I	Chr.5: 140875799-140875799 on Build GRCh38
1062332	c.271G>A	p.D91N	Chr.5: 140875743-140875743 on Build GRCh38
5924363	c.217G>A	p.D73N	Chr.5: 140875689-140875689 on Build GRCh38
6452434	c.396G>A	p.V132V	Chr.5: 140875868-140875868 on Build GRCh38
5908533	c.364G>A	p.E122K	Chr.5: 140875836-140875836 on Build GRCh38
4482998	c.265C>T	p.R89W	Chr.5: 140875737-140875737 on Build GRCh38
5720387	c.451C>T	p.H151Y	Chr.5: 140875923-140875923 on Build GRCh38
5797710	c.388C>A	p.P130T	Chr.5: 140875860-140875860 on Build GRCh38
6209705	c.221T>A	p.L74H	Chr.5: 140875693-140875693 on Build GRCh38
3610208	c.449C>T	p.S150F	Chr.5: 140875921-140875921 on Build GRCh38
1219547	c.277G>A	p.E93K	Chr.5: 140875749-140875749 on Build GRCh38
3610206	c.351C>T	p.F117F	Chr.5: 140875823-140875823 on Build GRCh38
7422976	c.286T>A	p.C96S	Chr.5: 140875758-140875758 on Build GRCh38
1062331	c.238C>A	p.Q80K	Chr.5: 140875710-140875710 on Build GRCh38
1261246	c.289G>A	p.G97R	Chr.5: 140875761-140875761 on Build GRCh38
368330	c.245G>A	p.G82D	Chr.5: 140875717-140875717 on Build GRCh38
3241143	c.298G>A	p.A100T	Chr.5: 140875770-140875770 on Build GRCh38
6398333	c.214G>C	p.G72R	Chr.5: 140875686-140875686 on Build GRCh38
4712107	c.411A>C	p.E137D	Chr.5: 140875883-140875883 on Build GRCh38
4944352	c.452A>G	p.H151R	Chr.5: 140875924-140875924 on Build GRCh38
4654908	c.225G>T	p.L75L	Chr.5: 140875697-140875697 on Build GRCh38
1434027	c.299C>T	p.A100V	Chr.5: 140875771-140875771 on Build GRCh38
1062337	c.382G>A	p.D128N	Chr.5: 140875854-140875854 on Build GRCh38
1062335	c.288C>T	p.C96C	Chr.5: 140875760-140875760 on Build GRCh38
1062333	c.274C>T	p.R92C	Chr.5: 140875746-140875746 on Build GRCh38
3946958	c.327C>G	p.I109M	Chr.5: 140875799-140875799 on Build GRCh38
3610205	c.301G>A	p.E101K	Chr.5: 140875773-140875773 on Build GRCh38
4487086	c.313C>T	p.H105Y	Chr.5: 140875785-140875785 on Build GRCh38
5421336	c.458C>T	p.P153L	Chr.5: 140875930-140875930 on Build GRCh38
1130895	c.219C>A	p.D73E	Chr.5: 140875691-140875691 on Build GRCh38
5085767	c.300G>A	p.A100A	Chr.5: 140875772-140875772 on Build GRCh38
4005894	c.265C>A	p.R89R	Chr.5: 140875737-140875737 on Build GRCh38
262764	c.240G>T	p.Q80H	Chr.5: 140875712-140875712 on Build GRCh38
5786538	c.453T>C	p.H151H	Chr.5: 140875925-140875925 on Build GRCh38
7310709	c.309T>C	p.S103S	Chr.5: 140875781-140875781 on Build GRCh38
3610209	c.457C>T	p.P153S	Chr.5: 140875929-140875929 on Build GRCh38
4517841	c.439_440CC>TA	p.P147Y	Chr.5: 140875911-140875912 on Build GRCh38
397810	c.360C>A	p.D120E	Chr.5: 140875832-140875832 on Build GRCh38
5928710	c.416A>T	p.K139M	Chr.5: 140875888-140875888 on Build GRCh38
3610207	c.445G>A	p.D149N	Chr.5: 140875917-140875917 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs376091049	Chr.5: 140875790-140875790 on Build GRCh38
rs782640816	Chr.5: 140875707-140875707 on Build GRCh38
rs377753022	Chr.5: 140875798-140875798 on Build GRCh38
rs199848124	Chr.5: 140875823-140875823 on Build GRCh38
rs201813340	Chr.5: 140875886-140875886 on Build GRCh38
rs782000038	Chr.5: 140875783-140875783 on Build GRCh38
rs570265935	Chr.5: 140875816-140875816 on Build GRCh38
rs782331349	Chr.5: 140875866-140875866 on Build GRCh38
rs781893034	Chr.5: 140875692-140875692 on Build GRCh38
rs782260600	Chr.5: 140875845-140875845 on Build GRCh38
rs782436615	Chr.5: 140875833-140875833 on Build GRCh38
rs782377276	Chr.5: 140875764-140875764 on Build GRCh38
rs782079077	Chr.5: 140875742-140875742 on Build GRCh38
rs369339386	Chr.5: 140875754-140875754 on Build GRCh38
rs782520558	Chr.5: 140875695-140875695 on Build GRCh38
rs781811926	Chr.5: 140875760-140875760 on Build GRCh38
rs17844351	Chr.5: 140875686-140875686 on Build GRCh38
rs782073142	Chr.5: 140875795-140875795 on Build GRCh38
rs373515339	Chr.5: 140875761-140875761 on Build GRCh38
rs782173743	Chr.5: 140875874-140875874 on Build GRCh38
rs782174383	Chr.5: 140875776-140875776 on Build GRCh38
rs782702520	Chr.5: 140875830-140875830 on Build GRCh38
rs781927681	Chr.5: 140875868-140875868 on Build GRCh38
rs782211791	Chr.5: 140875865-140875865 on Build GRCh38
rs997656321	Chr.5: 140875768-140875768 on Build GRCh38
rs370212231	Chr.5: 140875803-140875803 on Build GRCh38
rs531777396	Chr.5: 140875884-140875884 on Build GRCh38
rs782184518	Chr.5: 140875731-140875731 on Build GRCh38
rs372058384	Chr.5: 140875718-140875718 on Build GRCh38
rs782115108	Chr.5: 140875784-140875784 on Build GRCh38
rs782705899	Chr.5: 140875743-140875743 on Build GRCh38
rs781840611	Chr.5: 140875893-140875893 on Build GRCh38
rs530240100	Chr.5: 140875788-140875788 on Build GRCh38
rs782227729	Chr.5: 140875769-140875769 on Build GRCh38
rs782682417	Chr.5: 140875842-140875842 on Build GRCh38
rs372608018	Chr.5: 140875736-140875736 on Build GRCh38
rs139165612	Chr.5: 140875715-140875715 on Build GRCh38
rs970551953	Chr.5: 140875851-140875851 on Build GRCh38
rs367888868	Chr.5: 140875826-140875826 on Build GRCh38
rs112377727	Chr.5: 140875811-140875811 on Build GRCh38
rs782599011	Chr.5: 140875719-140875719 on Build GRCh38
rs782489258	Chr.5: 140875752-140875752 on Build GRCh38
rs782537122	Chr.5: 140875892-140875892 on Build GRCh38
rs781862261	Chr.5: 140875751-140875751 on Build GRCh38
rs782107591	Chr.5: 140875888-140875888 on Build GRCh38
rs781902632	Chr.5: 140875891-140875891 on Build GRCh38
rs782804026	Chr.5: 140875878-140875878 on Build GRCh38
rs781933974	Chr.5: 140875772-140875772 on Build GRCh38
rs782785462	Chr.5: 140875815-140875815 on Build GRCh38
rs376701509	Chr.5: 140875735-140875735 on Build GRCh38
rs782793601	Chr.5: 140875749-140875749 on Build GRCh38
rs182160950	Chr.5: 140875771-140875771 on Build GRCh38
rs782371058	Chr.5: 140875858-140875858 on Build GRCh38
rs781911910	Chr.5: 140875799-140875799 on Build GRCh38
rs782144486	Chr.5: 140875746-140875746 on Build GRCh38
rs187904552	Chr.5: 140875781-140875781 on Build GRCh38

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