Product Details

Primer Sequences
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Primer Chromosome Location
Chr.16: 10898644-10898883 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer™ Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
UniGene
Hs.592051
Gene Chromosome Location
Chr.16: 10866208-10941562 on Build GRCh38
Transcripts
NM_000246.3 NM_001286402.1 NM_001286403.1 NR_104444.1 XM_006720880.3 XM_011522484.2 XM_011522485.2 XM_011522486.2 XM_011522487.2 XM_011522488.2 XM_011522489.2 XM_011522490.2 XM_011522491.2 XM_011522492.2 XM_011522493.2 XM_011522494.2 XM_011522495.2 XM_011522496.2

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
5551506 c.349G>A p.D117N Chr.16: 10898723-10898723 on Build GRCh38
5576534 c.298G>A p.E100K Chr.16: 10898672-10898672 on Build GRCh38
5619859 c.319C>T p.Q107* Chr.16: 10898693-10898693 on Build GRCh38
4652664 c.304G>A p.D102N Chr.16: 10898678-10898678 on Build GRCh38

SNP Detail

SNP ID Chromosome Location
rs1053672334 Chr.16: 10898792-10898792 on Build GRCh38
rs767127905 Chr.16: 10898738-10898738 on Build GRCh38
rs762827925 Chr.16: 10898720-10898720 on Build GRCh38
rs754410416 Chr.16: 10898765-10898765 on Build GRCh38
rs371519540 Chr.16: 10898681-10898681 on Build GRCh38
rs969511007 Chr.16: 10898851-10898851 on Build GRCh38
rs994457085 Chr.16: 10898761-10898761 on Build GRCh38
rs1046253403 Chr.16: 10898830-10898830 on Build GRCh38
rs535802743 Chr.16: 10898725-10898725 on Build GRCh38
rs555852173 Chr.16: 10898791-10898792 on Build GRCh38
rs747941848 Chr.16: 10898685-10898685 on Build GRCh38
rs528479832 Chr.16: 10898855-10898855 on Build GRCh38
rs142443082 Chr.16: 10898726-10898726 on Build GRCh38
rs936354555 Chr.16: 10898790-10898790 on Build GRCh38
rs947880537 Chr.16: 10898828-10898828 on Build GRCh38
rs906605599 Chr.16: 10898831-10898831 on Build GRCh38
rs368329679 Chr.16: 10898705-10898705 on Build GRCh38
rs578099843 Chr.16: 10898674-10898674 on Build GRCh38
rs762923361 Chr.16: 10898833-10898833 on Build GRCh38
rs1023772845 Chr.16: 10898850-10898850 on Build GRCh38
rs933826624 Chr.16: 10898696-10898696 on Build GRCh38
rs375019139 Chr.16: 10898700-10898700 on Build GRCh38
rs1025893593 Chr.16: 10898780-10898780 on Build GRCh38
rs6498121 Chr.16: 10898858-10898858 on Build GRCh38
rs994240689 Chr.16: 10898854-10898854 on Build GRCh38
rs757772586 Chr.16: 10898772-10898772 on Build GRCh38
rs925244781 Chr.16: 10898666-10898666 on Build GRCh38
rs559659578 Chr.16: 10898846-10898846 on Build GRCh38
rs139248444 Chr.16: 10898682-10898682 on Build GRCh38
rs965626531 Chr.16: 10898788-10898788 on Build GRCh38
rs746093639 Chr.16: 10898680-10898680 on Build GRCh38
rs992327449 Chr.16: 10898818-10898818 on Build GRCh38
rs935949937 Chr.16: 10898667-10898667 on Build GRCh38
rs764473583 Chr.16: 10898763-10898763 on Build GRCh38
rs574043195 Chr.16: 10898793-10898793 on Build GRCh38
rs542604670 Chr.16: 10898813-10898813 on Build GRCh38
rs760981549 Chr.16: 10898744-10898744 on Build GRCh38
rs118033640 Chr.16: 10898743-10898743 on Build GRCh38
rs757438997 Chr.16: 10898671-10898671 on Build GRCh38
rs898135579 Chr.16: 10898750-10898750 on Build GRCh38

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