Product Details

Primer Sequences

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Primer Chromosome Location

Chr.16: 3013451-3013676 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CLDN9

Entrez Gene ID

9080

Gene Name

claudin 9

Gene Aliases

-

UniGene

Hs.296949

Gene Chromosome Location

Chr.16: 3012456-3014505 on Build GRCh38

Transcripts

NM_020982.3

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
3112542	c.116G>A	p.S39N	Chr.16: 3013478-3013478 on Build GRCh38
1629869	c.250T>C	p.C84R	Chr.16: 3013612-3013612 on Build GRCh38
6630060	c.109G>A	p.G37S	Chr.16: 3013471-3013471 on Build GRCh38
4532604	c.189G>T	p.Q63H	Chr.16: 3013551-3013551 on Build GRCh38
1293567	c.267_268GC>TG	p.L90V	Chr.16: 3013629-3013630 on Build GRCh38
4151312	c.138G>T	p.V46V	Chr.16: 3013500-3013500 on Build GRCh38
6630057	c.240A>G	p.A80A	Chr.16: 3013602-3013602 on Build GRCh38
6630056	c.123G>T	p.V41V	Chr.16: 3013485-3013485 on Build GRCh38
1293566	c.237C>T	p.A79A	Chr.16: 3013599-3013599 on Build GRCh38
1293565	c.216T>G	p.A72A	Chr.16: 3013578-3013578 on Build GRCh38
1293564	c.177G>C	p.T59T	Chr.16: 3013539-3013539 on Build GRCh38
1293563	c.102C>T	p.A34A	Chr.16: 3013464-3013464 on Build GRCh38
4060169	c.171G>A	p.Q57Q	Chr.16: 3013533-3013533 on Build GRCh38
1201321	c.305C>T	p.A102V	Chr.16: 3013667-3013667 on Build GRCh38
4060168	c.99C>T	p.T33T	Chr.16: 3013461-3013461 on Build GRCh38
1128984	c.161G>C	p.C54S	Chr.16: 3013523-3013523 on Build GRCh38
6630051	c.123G>A	p.V41V	Chr.16: 3013485-3013485 on Build GRCh38
6436521	c.238G>C	p.A80P	Chr.16: 3013600-3013600 on Build GRCh38
6417524	c.238G>A	p.A80T	Chr.16: 3013600-3013600 on Build GRCh38
358975	c.136G>T	p.V46L	Chr.16: 3013498-3013498 on Build GRCh38
969893	c.275T>A	p.L92Q	Chr.16: 3013637-3013637 on Build GRCh38
3508849	c.265C>T	p.L89L	Chr.16: 3013627-3013627 on Build GRCh38
5850734	c.127G>A	p.A43T	Chr.16: 3013489-3013489 on Build GRCh38
7413986	c.98C>A	p.T33N	Chr.16: 3013460-3013460 on Build GRCh38
5685240	c.177G>A	p.T59T	Chr.16: 3013539-3013539 on Build GRCh38
5557197	c.108C>T	p.I36I	Chr.16: 3013470-3013470 on Build GRCh38
3112547	c.168G>A	p.V56V	Chr.16: 3013530-3013530 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs142749972	Chr.16: 3013525-3013525 on Build GRCh38
rs77321442	Chr.16: 3013583-3013583 on Build GRCh38
rs372231955	Chr.16: 3013539-3013539 on Build GRCh38
rs748653676	Chr.16: 3013599-3013599 on Build GRCh38
rs775175337	Chr.16: 3013604-3013604 on Build GRCh38
rs753769971	Chr.16: 3013568-3013568 on Build GRCh38
rs868531041	Chr.16: 3013645-3013645 on Build GRCh38
rs762719346	Chr.16: 3013488-3013488 on Build GRCh38
rs755940060	Chr.16: 3013510-3013510 on Build GRCh38
rs1022400616	Chr.16: 3013647-3013647 on Build GRCh38
rs763070067	Chr.16: 3013632-3013632 on Build GRCh38
rs372118474	Chr.16: 3013619-3013619 on Build GRCh38
rs761935222	Chr.16: 3013569-3013569 on Build GRCh38
rs750660041	Chr.16: 3013578-3013578 on Build GRCh38
rs757420145	Chr.16: 3013469-3013469 on Build GRCh38
rs867461598	Chr.16: 3013553-3013553 on Build GRCh38
rs779085754	Chr.16: 3013471-3013471 on Build GRCh38
rs770579664	Chr.16: 3013600-3013600 on Build GRCh38
rs145882247	Chr.16: 3013483-3013483 on Build GRCh38
rs747585456	Chr.16: 3013533-3013533 on Build GRCh38
rs201252752	Chr.16: 3013520-3013520 on Build GRCh38
rs1009684231	Chr.16: 3013638-3013638 on Build GRCh38
rs138697130	Chr.16: 3013506-3013506 on Build GRCh38
rs201203260	Chr.16: 3013618-3013618 on Build GRCh38
rs759442841	Chr.16: 3013499-3013499 on Build GRCh38
rs746072973	Chr.16: 3013523-3013523 on Build GRCh38
rs574035742	Chr.16: 3013538-3013538 on Build GRCh38
rs202102733	Chr.16: 3013540-3013540 on Build GRCh38
rs772316258	Chr.16: 3013473-3013473 on Build GRCh38
rs375644575	Chr.16: 3013603-3013603 on Build GRCh38
rs765328047	Chr.16: 3013624-3013624 on Build GRCh38
rs760454690	Chr.16: 3013606-3013606 on Build GRCh38
rs554077504	Chr.16: 3013535-3013535 on Build GRCh38
rs772812332	Chr.16: 3013486-3013486 on Build GRCh38
rs764058885	Chr.16: 3013567-3013567 on Build GRCh38
rs769348025	Chr.16: 3013485-3013485 on Build GRCh38
rs755451876	Chr.16: 3013646-3013646 on Build GRCh38
rs765599212	Chr.16: 3013532-3013532 on Build GRCh38
rs544084273	Chr.16: 3013588-3013588 on Build GRCh38
rs142023644	Chr.16: 3013651-3013651 on Build GRCh38
rs1044675110	Chr.16: 3013597-3013597 on Build GRCh38
rs200358793	Chr.16: 3013642-3013642 on Build GRCh38
rs151129127	Chr.16: 3013584-3013584 on Build GRCh38
rs781642627	Chr.16: 3013649-3013649 on Build GRCh38
rs778320259	Chr.16: 3013654-3013654 on Build GRCh38
rs760494708	Chr.16: 3013564-3013564 on Build GRCh38
rs200336281	Chr.16: 3013470-3013470 on Build GRCh38
rs374545504	Chr.16: 3013633-3013633 on Build GRCh38
rs748929677	Chr.16: 3013513-3013514 on Build GRCh38
rs781782556	Chr.16: 3013593-3013593 on Build GRCh38
rs750418823	Chr.16: 3013625-3013625 on Build GRCh38
rs374973139	Chr.16: 3013563-3013563 on Build GRCh38
rs145786872	Chr.16: 3013482-3013482 on Build GRCh38
rs746271447	Chr.16: 3013472-3013472 on Build GRCh38
rs758798960	Chr.16: 3013524-3013524 on Build GRCh38
rs765239666	Chr.16: 3013572-3013572 on Build GRCh38
rs766188648	Chr.16: 3013497-3013497 on Build GRCh38
rs770737027	Chr.16: 3013537-3013538 on Build GRCh38
rs767203719	Chr.16: 3013503-3013503 on Build GRCh38
rs768426809	Chr.16: 3013613-3013613 on Build GRCh38
rs764180087	Chr.16: 3013514-3013514 on Build GRCh38
rs147520555	Chr.16: 3013582-3013582 on Build GRCh38
rs774119241	Chr.16: 3013498-3013498 on Build GRCh38
rs756651062	Chr.16: 3013652-3013652 on Build GRCh38
rs779172380	Chr.16: 3013521-3013521 on Build GRCh38
rs767350382	Chr.16: 3013542-3013542 on Build GRCh38

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