Product Details

Primer Sequences

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Primer Chromosome Location

Chr.3: 98516624-98516893 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CLDND1

Entrez Gene ID

56650

Gene Name

claudin domain containing 1

Gene Aliases

C3orf4, GENX-3745

UniGene

Hs.531371

Gene Chromosome Location

Chr.3: 98515473-98523066 on Build GRCh38

Transcripts

NM_001040181.1 NM_001040182.1 NM_001040183.1 NM_001040199.1 NM_001040200.1 NM_019895.2

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4120796	c.721C>T	p.R241W	Chr.3: 98516700-98516700 on Build GRCh38
3735240	c.631G>A	p.V211I	Chr.3: 98516859-98516859 on Build GRCh38
3721267	c.756T>G	p.A252A	Chr.3: 98516734-98516734 on Build GRCh38
79652	c.594C>G	p.L198L	Chr.3: 98516827-98516827 on Build GRCh38
732212	c.560C>T	p.S187L	Chr.3: 98516861-98516861 on Build GRCh38
6454103	c.820C>T	p.R274C	Chr.3: 98516670-98516670 on Build GRCh38
3735241	c.562G>A	p.V188I	Chr.3: 98516859-98516859 on Build GRCh38
6332437	c.796G>T	p.E266*	Chr.3: 98516694-98516694 on Build GRCh38
1693076	c.682C>T	p.P228S	Chr.3: 98516808-98516808 on Build GRCh38
3721268	c.687T>G	p.A229A	Chr.3: 98516734-98516734 on Build GRCh38
6214037	c.713C>T	p.S238F	Chr.3: 98516777-98516777 on Build GRCh38
1618168	c.790C>A	p.R264R	Chr.3: 98516700-98516700 on Build GRCh38
6165430	c.667C>G	p.Q223E	Chr.3: 98516823-98516823 on Build GRCh38
301947	c.744G>T	p.K248N	Chr.3: 98516677-98516677 on Build GRCh38
1594092	c.791G>A	p.R264Q	Chr.3: 98516699-98516699 on Build GRCh38
1693077	c.613C>T	p.P205S	Chr.3: 98516808-98516808 on Build GRCh38
6454104	c.751C>T	p.R251C	Chr.3: 98516670-98516670 on Build GRCh38
6332438	c.727G>T	p.E243*	Chr.3: 98516694-98516694 on Build GRCh38
5994639	c.664C>T	p.H222Y	Chr.3: 98516826-98516826 on Build GRCh38
1618169	c.721C>A	p.R241R	Chr.3: 98516700-98516700 on Build GRCh38
6214038	c.644C>T	p.S215F	Chr.3: 98516777-98516777 on Build GRCh38
5865418	c.779C>T	p.A260V	Chr.3: 98516711-98516711 on Build GRCh38
6165431	c.598C>G	p.Q200E	Chr.3: 98516823-98516823 on Build GRCh38
1309537	c.689A>G	p.N230S	Chr.3: 98516801-98516801 on Build GRCh38
5720096	c.750C>T	p.F250F	Chr.3: 98516740-98516740 on Build GRCh38
5714197	c.611-8C>T	p.?	Chr.3: 98516887-98516887 on Build GRCh38
1201324	c.745C>T	p.Q249*	Chr.3: 98516745-98516745 on Build GRCh38
1309538	c.620A>G	p.N207S	Chr.3: 98516801-98516801 on Build GRCh38
5994640	c.595C>T	p.H199Y	Chr.3: 98516826-98516826 on Build GRCh38
1201325	c.676C>T	p.Q226*	Chr.3: 98516745-98516745 on Build GRCh38
5865419	c.710C>T	p.A237V	Chr.3: 98516711-98516711 on Build GRCh38
5482931	c.625G>A	p.G209S	Chr.3: 98516865-98516865 on Build GRCh38
5400148	c.804C>T	p.T268T	Chr.3: 98516686-98516686 on Build GRCh38
5720097	c.681C>T	p.F227F	Chr.3: 98516740-98516740 on Build GRCh38
5714198	c.542-8C>T	p.?	Chr.3: 98516887-98516887 on Build GRCh38
1149816	c.629C>T	p.S210L	Chr.3: 98516861-98516861 on Build GRCh38
5482932	c.556G>A	p.G186S	Chr.3: 98516865-98516865 on Build GRCh38
1049227	c.722G>A	p.R241Q	Chr.3: 98516699-98516699 on Build GRCh38
4672703	c.760G>A	p.A254T	Chr.3: 98516730-98516730 on Build GRCh38
5400149	c.735C>T	p.T245T	Chr.3: 98516686-98516686 on Build GRCh38
4120795	c.790C>T	p.R264W	Chr.3: 98516700-98516700 on Build GRCh38
4672704	c.691G>A	p.A231T	Chr.3: 98516730-98516730 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs893903422	Chr.3: 98516782-98516782 on Build GRCh38
rs368555427	Chr.3: 98516811-98516811 on Build GRCh38
rs779474164	Chr.3: 98516868-98516868 on Build GRCh38
rs780932391	Chr.3: 98516858-98516858 on Build GRCh38
rs763338732	Chr.3: 98516689-98516689 on Build GRCh38
rs916374071	Chr.3: 98516688-98516688 on Build GRCh38
rs370112101	Chr.3: 98516670-98516670 on Build GRCh38
rs1004193830	Chr.3: 98516849-98516849 on Build GRCh38
rs770677430	Chr.3: 98516762-98516762 on Build GRCh38
rs878855906	Chr.3: 98516688-98516693 on Build GRCh38
rs146448772	Chr.3: 98516786-98516786 on Build GRCh38
rs372513914	Chr.3: 98516797-98516797 on Build GRCh38
rs758958263	Chr.3: 98516673-98516673 on Build GRCh38
rs755663467	Chr.3: 98516861-98516861 on Build GRCh38
rs769150314	Chr.3: 98516783-98516783 on Build GRCh38
rs745462170	Chr.3: 98516860-98516860 on Build GRCh38
rs1054266512	Chr.3: 98516803-98516803 on Build GRCh38
rs894317699	Chr.3: 98516807-98516807 on Build GRCh38
rs148992077	Chr.3: 98516793-98516793 on Build GRCh38
rs761957957	Chr.3: 98516700-98516700 on Build GRCh38
rs374891953	Chr.3: 98516683-98516683 on Build GRCh38
rs999514052	Chr.3: 98516753-98516753 on Build GRCh38
rs756116277	Chr.3: 98516728-98516728 on Build GRCh38
rs372572371	Chr.3: 98516869-98516869 on Build GRCh38
rs146171883	Chr.3: 98516746-98516746 on Build GRCh38
rs141077657	Chr.3: 98516794-98516794 on Build GRCh38
rs751452413	Chr.3: 98516846-98516846 on Build GRCh38
rs200208043	Chr.3: 98516736-98516736 on Build GRCh38
rs760831053	Chr.3: 98516804-98516804 on Build GRCh38
rs776351604	Chr.3: 98516761-98516761 on Build GRCh38
rs141729450	Chr.3: 98516709-98516709 on Build GRCh38
rs375451587	Chr.3: 98516809-98516809 on Build GRCh38
rs773236328	Chr.3: 98516771-98516771 on Build GRCh38
rs746793770	Chr.3: 98516759-98516759 on Build GRCh38
rs771953222	Chr.3: 98516663-98516663 on Build GRCh38
rs776269352	Chr.3: 98516671-98516671 on Build GRCh38
rs35785548	Chr.3: 98516782-98516783 on Build GRCh38
rs763208450	Chr.3: 98516795-98516795 on Build GRCh38
rs766035742	Chr.3: 98516654-98516655 on Build GRCh38
rs11553649	Chr.3: 98516737-98516737 on Build GRCh38
rs758277570	Chr.3: 98516743-98516743 on Build GRCh38
rs143073746	Chr.3: 98516660-98516660 on Build GRCh38
rs756974477	Chr.3: 98516850-98516850 on Build GRCh38
rs147410947	Chr.3: 98516669-98516669 on Build GRCh38
rs764394607	Chr.3: 98516699-98516699 on Build GRCh38
rs1024351133	Chr.3: 98516832-98516832 on Build GRCh38
rs746686826	Chr.3: 98516730-98516730 on Build GRCh38
rs767820286	Chr.3: 98516799-98516799 on Build GRCh38
rs767618647	Chr.3: 98516707-98516707 on Build GRCh38
rs139006614	Chr.3: 98516824-98516824 on Build GRCh38
rs140100745	Chr.3: 98516740-98516740 on Build GRCh38
rs770385121	Chr.3: 98516674-98516674 on Build GRCh38
rs750569803	Chr.3: 98516801-98516801 on Build GRCh38
rs780688644	Chr.3: 98516770-98516770 on Build GRCh38
rs147071610	Chr.3: 98516837-98516837 on Build GRCh38

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