Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 140877468-140877969 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

PCDHA1

Entrez Gene ID

56147

Gene Name

protocadherin alpha 1

Gene Aliases

PCDH-ALPHA1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140786136-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA10

Entrez Gene ID

56139

Gene Name

protocadherin alpha 10

Gene Aliases

CNR8, CNRN8, CNRS8, CRNR8, PCDH-ALPHA10

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140855883-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA11

Entrez Gene ID

56138

Gene Name

protocadherin alpha 11

Gene Aliases

CNR7, CNRN7, CNRS7, CRNR7, PCDH-ALPHA11

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140867513-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA12

Entrez Gene ID

56137

Gene Name

protocadherin alpha 12

Gene Aliases

PCDH-ALPHA12

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140875302-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA2

Entrez Gene ID

56146

Gene Name

protocadherin alpha 2

Gene Aliases

PCDH-ALPHA2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140794859-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA3

Entrez Gene ID

56145

Gene Name

protocadherin alpha 3

Gene Aliases

PCDH-ALPHA3

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140801198-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA4

Entrez Gene ID

56144

Gene Name

protocadherin alpha 4

Gene Aliases

CNR1, CNRN1, CRNR1, PCDH-ALPHA4

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140807074-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA5

Entrez Gene ID

56143

Gene Name

protocadherin alpha 5

Gene Aliases

CNR6, CNRN6, CNRS6, CRNR6, PCDH-ALPHA5

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140821776-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA6

Entrez Gene ID

56142

Gene Name

protocadherin alpha 6

Gene Aliases

CNR2, CNRN2, CNRS2, CRNR2, PCDH-ALPHA6

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140827922-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA7

Entrez Gene ID

56141

Gene Name

protocadherin alpha 7

Gene Aliases

CNR4, CNRN4, CNRS4, CRNR4, PCDH-ALPHA7

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140834384-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA8

Entrez Gene ID

56140

Gene Name

protocadherin alpha 8

Gene Aliases

PCDH-ALPHA8

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140841322-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Gene Symbol

PCDHA9

Entrez Gene ID

9752

Gene Name

protocadherin alpha 9

Gene Aliases

PCDH-ALPHA9

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140847772-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_031864.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
3725359	c.2177C>T	p.P726L	Chr.5: 140877649-140877649 on Build GRCh38
3851236	c.2184C>T	p.T728T	Chr.5: 140877656-140877656 on Build GRCh38
7091690	c.2178G>A	p.P726P	Chr.5: 140877650-140877650 on Build GRCh38
6298617	c.2220G>T	p.V740V	Chr.5: 140877692-140877692 on Build GRCh38
5633176	c.2224T>A	p.S742T	Chr.5: 140877696-140877696 on Build GRCh38
1261245	c.2257C>G	p.Q753E	Chr.5: 140877729-140877729 on Build GRCh38
3851234	c.2006T>C	p.L669P	Chr.5: 140877478-140877478 on Build GRCh38
6101946	c.2117C>T	p.A706V	Chr.5: 140877589-140877589 on Build GRCh38
6169173	c.2042G>A	p.R681Q	Chr.5: 140877514-140877514 on Build GRCh38
5709503	c.2003C>T	p.S668L	Chr.5: 140877475-140877475 on Build GRCh38
6385114	c.2114G>T	p.C705F	Chr.5: 140877586-140877586 on Build GRCh38
4434681	c.2339G>A	p.R780Q	Chr.5: 140877811-140877811 on Build GRCh38
379713	c.2112C>G	p.I704M	Chr.5: 140877584-140877584 on Build GRCh38
4930943	c.2131C>T	p.L711L	Chr.5: 140877603-140877603 on Build GRCh38
6359574	c.2118G>A	p.A706A	Chr.5: 140877590-140877590 on Build GRCh38
1062367	c.2073G>A	p.A691A	Chr.5: 140877545-140877545 on Build GRCh38
5679121	c.2116G>T	p.A706S	Chr.5: 140877588-140877588 on Build GRCh38
6739585	c.2229C>T	p.S743S	Chr.5: 140877701-140877701 on Build GRCh38
3393222	c.2159C>T	p.A720V	Chr.5: 140877631-140877631 on Build GRCh38
6456020	c.2103C>G	p.I701M	Chr.5: 140877575-140877575 on Build GRCh38
5009648	c.2351T>C	p.L784S	Chr.5: 140877823-140877823 on Build GRCh38
1166163	c.2198C>T	p.A733V	Chr.5: 140877670-140877670 on Build GRCh38
3610231	c.2292G>A	p.P764P	Chr.5: 140877764-140877764 on Build GRCh38
673936	c.2036C>T	p.S679L	Chr.5: 140877508-140877508 on Build GRCh38
736152	c.2123C>A	p.S708Y	Chr.5: 140877595-140877595 on Build GRCh38
4005897	c.2141C>T	p.T714M	Chr.5: 140877613-140877613 on Build GRCh38
125182	c.2128C>A	p.L710M	Chr.5: 140877600-140877600 on Build GRCh38
5085768	c.2041C>T	p.R681W	Chr.5: 140877513-140877513 on Build GRCh38
1434045	c.2164C>T	p.R722C	Chr.5: 140877636-140877636 on Build GRCh38
3241232	c.2209C>T	p.P737S	Chr.5: 140877681-140877681 on Build GRCh38
7326015	c.2260A>G	p.R754G	Chr.5: 140877732-140877732 on Build GRCh38
3241230	c.2139C>T	p.L713L	Chr.5: 140877611-140877611 on Build GRCh38
3241227	c.2091C>T	p.N697N	Chr.5: 140877563-140877563 on Build GRCh38
399992	c.2142G>T	p.T714T	Chr.5: 140877614-140877614 on Build GRCh38
3241222	c.2004G>A	p.S668S	Chr.5: 140877476-140877476 on Build GRCh38
3851237	c.2253G>A	p.S751S	Chr.5: 140877725-140877725 on Build GRCh38
3715008	c.2062G>A	p.D688N	Chr.5: 140877534-140877534 on Build GRCh38
3851235	c.2016C>T	p.N672N	Chr.5: 140877488-140877488 on Build GRCh38
7087888	c.2106C>A	p.I702I	Chr.5: 140877578-140877578 on Build GRCh38
5576919	c.2068G>A	p.E690K	Chr.5: 140877540-140877540 on Build GRCh38
6739580	c.2131C>A	p.L711M	Chr.5: 140877603-140877603 on Build GRCh38
5568752	c.2040G>A	p.S680S	Chr.5: 140877512-140877512 on Build GRCh38
6872181	c.2228G>A	p.S743N	Chr.5: 140877700-140877700 on Build GRCh38
1434046	c.2300C>T	p.T767M	Chr.5: 140877772-140877772 on Build GRCh38
3241233	c.2214G>A	p.T738T	Chr.5: 140877686-140877686 on Build GRCh38
6739576	c.2034G>A	p.T678T	Chr.5: 140877506-140877506 on Build GRCh38
5904812	c.2053G>A	p.G685S	Chr.5: 140877525-140877525 on Build GRCh38
3610229	c.2065C>T	p.P689S	Chr.5: 140877537-140877537 on Build GRCh38
3409855	c.2202G>A	p.P734P	Chr.5: 140877674-140877674 on Build GRCh38
1062366	c.2031G>T	p.K677N	Chr.5: 140877503-140877503 on Build GRCh38
5867529	c.2237G>A	p.G746E	Chr.5: 140877709-140877709 on Build GRCh38
5186371	c.2286G>T	p.E762D	Chr.5: 140877758-140877758 on Build GRCh38
1567421	c.2017G>A	p.G673S	Chr.5: 140877489-140877489 on Build GRCh38
7269063	c.2165G>A	p.R722H	Chr.5: 140877637-140877637 on Build GRCh38
7244352	c.2077C>A	p.L693M	Chr.5: 140877549-140877549 on Build GRCh38
1219544	c.2095T>C	p.Y699H	Chr.5: 140877567-140877567 on Build GRCh38
3610232	c.2328T>A	p.L776L	Chr.5: 140877800-140877800 on Build GRCh38
351149	c.2173G>T	p.A725S	Chr.5: 140877645-140877645 on Build GRCh38
5113734	c.2217G>T	p.L739L	Chr.5: 140877689-140877689 on Build GRCh38
3610230	c.2083G>A	p.D695N	Chr.5: 140877555-140877555 on Build GRCh38
1434044	c.2107G>A	p.A703T	Chr.5: 140877579-140877579 on Build GRCh38
3241231	c.2160G>A	p.A720A	Chr.5: 140877632-140877632 on Build GRCh38
4779831	c.2331G>A	p.Q777Q	Chr.5: 140877803-140877803 on Build GRCh38
125183	c.2213C>T	p.T738M	Chr.5: 140877685-140877685 on Build GRCh38
6856289	c.2197G>A	p.A733T	Chr.5: 140877669-140877669 on Build GRCh38
6227127	c.2292G>T	p.P764P	Chr.5: 140877764-140877764 on Build GRCh38
3241228	c.2092G>A	p.V698M	Chr.5: 140877564-140877564 on Build GRCh38
5486952	c.2191C>T	p.R731W	Chr.5: 140877663-140877663 on Build GRCh38
3241225	c.2055C>T	p.G685G	Chr.5: 140877527-140877527 on Build GRCh38
6491118	c.2185G>T	p.V729L	Chr.5: 140877657-140877657 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs1044322759	Chr.5: 140877540-140877540 on Build GRCh38
rs782765998	Chr.5: 140877627-140877627 on Build GRCh38
rs782346022	Chr.5: 140877702-140877702 on Build GRCh38
rs377126743	Chr.5: 140877765-140877765 on Build GRCh38
rs782747532	Chr.5: 140877869-140877869 on Build GRCh38
rs376081263	Chr.5: 140877604-140877604 on Build GRCh38
rs979836328	Chr.5: 140877736-140877736 on Build GRCh38
rs781985023	Chr.5: 140877676-140877676 on Build GRCh38
rs782090888	Chr.5: 140877583-140877583 on Build GRCh38
rs781933436	Chr.5: 140877553-140877553 on Build GRCh38
rs781796819	Chr.5: 140877706-140877707 on Build GRCh38
rs904032241	Chr.5: 140877889-140877889 on Build GRCh38
rs781878840	Chr.5: 140877500-140877500 on Build GRCh38
rs996962116	Chr.5: 140877590-140877590 on Build GRCh38
rs904001764	Chr.5: 140877581-140877581 on Build GRCh38
rs369703340	Chr.5: 140877649-140877649 on Build GRCh38
rs200651425	Chr.5: 140877744-140877744 on Build GRCh38
rs781824762	Chr.5: 140877509-140877509 on Build GRCh38
rs782259804	Chr.5: 140877792-140877792 on Build GRCh38
rs782271327	Chr.5: 140877517-140877517 on Build GRCh38
rs782112072	Chr.5: 140877719-140877719 on Build GRCh38
rs570815670	Chr.5: 140877725-140877725 on Build GRCh38
rs782179941	Chr.5: 140877558-140877558 on Build GRCh38
rs782370638	Chr.5: 140877810-140877810 on Build GRCh38
rs892674985	Chr.5: 140877508-140877508 on Build GRCh38
rs539793128	Chr.5: 140877738-140877738 on Build GRCh38
rs782021677	Chr.5: 140877568-140877568 on Build GRCh38
rs781814794	Chr.5: 140877726-140877726 on Build GRCh38
rs782249537	Chr.5: 140877751-140877751 on Build GRCh38
rs116613760	Chr.5: 140877704-140877704 on Build GRCh38
rs782804856	Chr.5: 140877850-140877850 on Build GRCh38
rs945643108	Chr.5: 140877844-140877844 on Build GRCh38
rs538675333	Chr.5: 140877944-140877944 on Build GRCh38
rs138162923	Chr.5: 140877671-140877671 on Build GRCh38
rs781916987	Chr.5: 140877828-140877828 on Build GRCh38
rs782433528	Chr.5: 140877668-140877668 on Build GRCh38
rs781827236	Chr.5: 140877873-140877873 on Build GRCh38
rs782472866	Chr.5: 140877646-140877646 on Build GRCh38
rs974017564	Chr.5: 140877705-140877705 on Build GRCh38
rs189370080	Chr.5: 140877740-140877740 on Build GRCh38
rs782480713	Chr.5: 140877758-140877758 on Build GRCh38
rs782719581	Chr.5: 140877594-140877594 on Build GRCh38
rs782156769	Chr.5: 140877832-140877832 on Build GRCh38
rs781785108	Chr.5: 140877488-140877488 on Build GRCh38
rs782342116	Chr.5: 140877547-140877547 on Build GRCh38
rs267600400	Chr.5: 140877555-140877555 on Build GRCh38
rs372461540	Chr.5: 140877772-140877772 on Build GRCh38
rs142399025	Chr.5: 140877706-140877706 on Build GRCh38
rs782686661	Chr.5: 140877774-140877774 on Build GRCh38
rs782533203	Chr.5: 140877607-140877607 on Build GRCh38
rs782617127	Chr.5: 140877506-140877506 on Build GRCh38
rs781878627	Chr.5: 140877852-140877852 on Build GRCh38
rs782076422	Chr.5: 140877815-140877815 on Build GRCh38
rs782654875	Chr.5: 140877750-140877750 on Build GRCh38
rs548426920	Chr.5: 140877669-140877669 on Build GRCh38
rs782471585	Chr.5: 140877874-140877874 on Build GRCh38
rs782663782	Chr.5: 140877799-140877799 on Build GRCh38
rs559831598	Chr.5: 140877580-140877580 on Build GRCh38
rs548787462	Chr.5: 140877641-140877641 on Build GRCh38
rs377753884	Chr.5: 140877685-140877685 on Build GRCh38
rs782391639	Chr.5: 140877542-140877542 on Build GRCh38
rs549678873	Chr.5: 140877710-140877711 on Build GRCh38
rs563591404	Chr.5: 140877496-140877496 on Build GRCh38
rs782120587	Chr.5: 140877867-140877867 on Build GRCh38
rs781999747	Chr.5: 140877714-140877714 on Build GRCh38
rs782565949	Chr.5: 140877881-140877881 on Build GRCh38
rs782624202	Chr.5: 140877544-140877544 on Build GRCh38
rs782165291	Chr.5: 140877489-140877489 on Build GRCh38
rs781966059	Chr.5: 140877813-140877813 on Build GRCh38
rs782129855	Chr.5: 140877569-140877569 on Build GRCh38
rs782465464	Chr.5: 140877730-140877730 on Build GRCh38
rs146522449	Chr.5: 140877816-140877816 on Build GRCh38
rs781946062	Chr.5: 140877703-140877703 on Build GRCh38
rs782395925	Chr.5: 140877672-140877672 on Build GRCh38
rs782415331	Chr.5: 140877564-140877564 on Build GRCh38
rs532509235	Chr.5: 140877504-140877504 on Build GRCh38
rs61274888	Chr.5: 140877941-140877941 on Build GRCh38
rs1056644080	Chr.5: 140877503-140877503 on Build GRCh38
rs782777600	Chr.5: 140877578-140877578 on Build GRCh38
rs782609531	Chr.5: 140877760-140877760 on Build GRCh38

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