Product Details

Primer Sequences

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Primer Chromosome Location

Chr.12: 40929648-40930236 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CNTN1

Entrez Gene ID

1272

Gene Name

contactin 1

Gene Aliases

F3, GP135, MYPCN

UniGene

Hs.143434

Gene Chromosome Location

Chr.12: 40692439-41072412 on Build GRCh38

Transcripts

NM_001256063.1 NM_001256064.1 NM_001843.3 NM_175038.2 XM_005268651.2 XM_006719241.2 XM_011537926.2 XM_011537927.2 XM_017018821.1 XM_017018822.1 XM_017018823.1 XM_017018824.1 XM_017018825.1 XM_017018826.1 XM_017018827.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
3986908	c.659A>G	p.K220R	Chr.12: 40929958-40929958 on Build GRCh38
6569545	c.700G>A	p.E234K	Chr.12: 40929999-40929999 on Build GRCh38
5557749	c.555A>G	p.K185K	Chr.12: 40929854-40929854 on Build GRCh38
4903480	c.641C>T	p.S214F	Chr.12: 40929940-40929940 on Build GRCh38
1361481	c.682C>A	p.P228T	Chr.12: 40929981-40929981 on Build GRCh38
7295531	c.640T>C	p.S214P	Chr.12: 40929939-40929939 on Build GRCh38
4188038	c.623A>C	p.N208T	Chr.12: 40929922-40929922 on Build GRCh38
6072351	c.537A>G	p.V179V	Chr.12: 40929836-40929836 on Build GRCh38
4673290	c.565G>T	p.V189L	Chr.12: 40929864-40929864 on Build GRCh38
6072352	c.537A>G	p.V179V	Chr.12: 40929836-40929836 on Build GRCh38
4207033	c.497-2A>T	p.?	Chr.12: 40929794-40929794 on Build GRCh38
1322525	c.696A>G	p.I232M	Chr.12: 40929995-40929995 on Build GRCh38
939138	c.664G>A	p.V222M	Chr.12: 40929963-40929963 on Build GRCh38
5346190	c.693A>C	p.P231P	Chr.12: 40929992-40929992 on Build GRCh38
4673293	c.667T>G	p.F223V	Chr.12: 40929966-40929966 on Build GRCh38
6305540	c.610T>A	p.S204T	Chr.12: 40929909-40929909 on Build GRCh38
4964561	c.612C>T	p.S204S	Chr.12: 40929911-40929911 on Build GRCh38
6631725	c.667T>C	p.F223L	Chr.12: 40929966-40929966 on Build GRCh38
3871552	c.502C>T	p.L168F	Chr.12: 40929801-40929801 on Build GRCh38
693179	c.697C>A	p.P233T	Chr.12: 40929996-40929996 on Build GRCh38
6271497	c.567G>T	p.V189V	Chr.12: 40929866-40929866 on Build GRCh38
1248590	c.703+1G>A	p.?	Chr.12: 40930003-40930003 on Build GRCh38
5557748	c.555A>G	p.K185K	Chr.12: 40929854-40929854 on Build GRCh38
3986909	c.659A>G	p.K220R	Chr.12: 40929958-40929958 on Build GRCh38
6136674	c.497-1G>A	p.?	Chr.12: 40929795-40929795 on Build GRCh38
4381346	c.694A>C	p.I232L	Chr.12: 40929993-40929993 on Build GRCh38
1705416	c.629C>T	p.S210F	Chr.12: 40929928-40929928 on Build GRCh38
6197589	c.512G>A	p.R171H	Chr.12: 40929811-40929811 on Build GRCh38
4389168	c.556C>T	p.R186W	Chr.12: 40929855-40929855 on Build GRCh38
3871553	c.502C>T	p.L168F	Chr.12: 40929801-40929801 on Build GRCh38
6136670	c.550G>T	p.D184Y	Chr.12: 40929849-40929849 on Build GRCh38
3460522	c.681C>T	p.I227I	Chr.12: 40929980-40929980 on Build GRCh38
6136673	c.499G>A	p.D167N	Chr.12: 40929798-40929798 on Build GRCh38
110569	c.592A>G	p.I198V	Chr.12: 40929891-40929891 on Build GRCh38
4964562	c.612C>T	p.S204S	Chr.12: 40929911-40929911 on Build GRCh38
5558861	c.587T>A	p.L196H	Chr.12: 40929886-40929886 on Build GRCh38
1361480	c.613G>A	p.D205N	Chr.12: 40929912-40929912 on Build GRCh38
3460521	c.681C>T	p.I227I	Chr.12: 40929980-40929980 on Build GRCh38
4673292	c.667T>G	p.F223V	Chr.12: 40929966-40929966 on Build GRCh38
7361781	c.614A>T	p.D205V	Chr.12: 40929913-40929913 on Build GRCh38
22685	c.497-2A>T	p.?	Chr.12: 40929794-40929794 on Build GRCh38
6631700	c.652A>G	p.I218V	Chr.12: 40929951-40929951 on Build GRCh38
1628584	c.703+1G>C	p.?	Chr.12: 40930003-40930003 on Build GRCh38
4207045	c.703+1G>A	p.?	Chr.12: 40930003-40930003 on Build GRCh38
939139	c.687C>A	p.L229L	Chr.12: 40929986-40929986 on Build GRCh38
6072350	c.681C>A	p.I227I	Chr.12: 40929980-40929980 on Build GRCh38
5346191	c.693A>C	p.P231P	Chr.12: 40929992-40929992 on Build GRCh38
6042647	c.643A>G	p.S215G	Chr.12: 40929942-40929942 on Build GRCh38
4188039	c.623A>C	p.N208T	Chr.12: 40929922-40929922 on Build GRCh38
6569546	c.700G>A	p.E234K	Chr.12: 40929999-40929999 on Build GRCh38
6072349	c.681C>A	p.I227I	Chr.12: 40929980-40929980 on Build GRCh38
3954713	c.555A>T	p.K185N	Chr.12: 40929854-40929854 on Build GRCh38
4673291	c.565G>T	p.V189L	Chr.12: 40929864-40929864 on Build GRCh38
5699069	c.611delC	p.D205fs*41	Chr.12: 40929910-40929910 on Build GRCh38
3730196	c.664G>A	p.V222M	Chr.12: 40929963-40929963 on Build GRCh38
6271496	c.567G>T	p.V189V	Chr.12: 40929866-40929866 on Build GRCh38
3935938	c.513C>G	p.R171R	Chr.12: 40929812-40929812 on Build GRCh38
4041675	c.560G>A	p.R187Q	Chr.12: 40929859-40929859 on Build GRCh38
6305541	c.610T>A	p.S204T	Chr.12: 40929909-40929909 on Build GRCh38
4903479	c.641C>T	p.S214F	Chr.12: 40929940-40929940 on Build GRCh38
1201649	c.556C>T	p.R186W	Chr.12: 40929855-40929855 on Build GRCh38
6042646	c.643A>G	p.S215G	Chr.12: 40929942-40929942 on Build GRCh38
7361780	c.614A>T	p.D205V	Chr.12: 40929913-40929913 on Build GRCh38
5136473	c.682C>A	p.P228T	Chr.12: 40929981-40929981 on Build GRCh38
5558860	c.587T>A	p.L196H	Chr.12: 40929886-40929886 on Build GRCh38
6197590	c.512G>A	p.R171H	Chr.12: 40929811-40929811 on Build GRCh38
3954714	c.555A>T	p.K185N	Chr.12: 40929854-40929854 on Build GRCh38
6136672	c.499G>A	p.D167N	Chr.12: 40929798-40929798 on Build GRCh38
268918	c.511C>T	p.R171C	Chr.12: 40929810-40929810 on Build GRCh38
5699070	c.611delC	p.D205fs*41	Chr.12: 40929910-40929910 on Build GRCh38
6136671	c.550G>T	p.D184Y	Chr.12: 40929849-40929849 on Build GRCh38
7295530	c.640T>C	p.S214P	Chr.12: 40929939-40929939 on Build GRCh38
6631699	c.652A>G	p.I218V	Chr.12: 40929951-40929951 on Build GRCh38
4381345	c.694A>C	p.I232L	Chr.12: 40929993-40929993 on Build GRCh38
6136675	c.497-1G>A	p.?	Chr.12: 40929795-40929795 on Build GRCh38
3935939	c.513C>G	p.R171R	Chr.12: 40929812-40929812 on Build GRCh38
260186	c.560G>A	p.R187Q	Chr.12: 40929859-40929859 on Build GRCh38
6631726	c.667T>C	p.F223L	Chr.12: 40929966-40929966 on Build GRCh38
3460520	c.613G>A	p.D205N	Chr.12: 40929912-40929912 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs757382046	Chr.12: 40929747-40929747 on Build GRCh38
rs138193121	Chr.12: 40929673-40929673 on Build GRCh38
rs192664798	Chr.12: 40929823-40929823 on Build GRCh38
rs750578149	Chr.12: 40929885-40929885 on Build GRCh38
rs772846701	Chr.12: 40929792-40929792 on Build GRCh38
rs755054882	Chr.12: 40929912-40929912 on Build GRCh38
rs975167072	Chr.12: 40930149-40930149 on Build GRCh38
rs770683180	Chr.12: 40929810-40929810 on Build GRCh38
rs138639141	Chr.12: 40929942-40929942 on Build GRCh38
rs1031993188	Chr.12: 40930108-40930108 on Build GRCh38
rs545323042	Chr.12: 40930063-40930063 on Build GRCh38
rs999620339	Chr.12: 40930062-40930062 on Build GRCh38
rs71449788	Chr.12: 40929684-40929684 on Build GRCh38
rs775149768	Chr.12: 40929863-40929863 on Build GRCh38
rs375891152	Chr.12: 40929758-40929758 on Build GRCh38
rs370237035	Chr.12: 40929774-40929774 on Build GRCh38
rs368372193	Chr.12: 40930042-40930042 on Build GRCh38
rs1032482987	Chr.12: 40929780-40929780 on Build GRCh38
rs972742579	Chr.12: 40929993-40929993 on Build GRCh38
rs963764393	Chr.12: 40930134-40930134 on Build GRCh38
rs755987043	Chr.12: 40929992-40929992 on Build GRCh38
rs769861119	Chr.12: 40929763-40929763 on Build GRCh38
rs1019264144	Chr.12: 40930116-40930116 on Build GRCh38
rs1023481610	Chr.12: 40930195-40930195 on Build GRCh38
rs189031520	Chr.12: 40930198-40930198 on Build GRCh38
rs1007882148	Chr.12: 40930107-40930107 on Build GRCh38
rs777748960	Chr.12: 40929922-40929922 on Build GRCh38
rs4408370	Chr.12: 40929859-40929859 on Build GRCh38
rs767936676	Chr.12: 40929882-40929882 on Build GRCh38
rs369589652	Chr.12: 40930170-40930170 on Build GRCh38
rs559563371	Chr.12: 40930023-40930023 on Build GRCh38
rs868602241	Chr.12: 40929977-40929977 on Build GRCh38
rs201037986	Chr.12: 40929811-40929811 on Build GRCh38
rs968249698	Chr.12: 40930175-40930175 on Build GRCh38
rs886744446	Chr.12: 40930067-40930067 on Build GRCh38
rs757271845	Chr.12: 40930039-40930039 on Build GRCh38
rs898413005	Chr.12: 40929689-40929689 on Build GRCh38
rs759325815	Chr.12: 40929847-40929847 on Build GRCh38
rs775185622	Chr.12: 40930049-40930049 on Build GRCh38
rs745456807	Chr.12: 40929963-40929963 on Build GRCh38
rs1023466413	Chr.12: 40929884-40929884 on Build GRCh38
rs756344032	Chr.12: 40929910-40929910 on Build GRCh38
rs1056506124	Chr.12: 40929991-40929991 on Build GRCh38
rs182672697	Chr.12: 40930019-40930019 on Build GRCh38
rs762232466	Chr.12: 40930009-40930009 on Build GRCh38
rs746136701	Chr.12: 40929761-40929761 on Build GRCh38
rs769590342	Chr.12: 40929982-40929982 on Build GRCh38
rs970520312	Chr.12: 40930196-40930196 on Build GRCh38
rs575968419	Chr.12: 40929796-40929796 on Build GRCh38
rs1008430726	Chr.12: 40929719-40929719 on Build GRCh38
rs17622354	Chr.12: 40929678-40929678 on Build GRCh38
rs138266018	Chr.12: 40929891-40929891 on Build GRCh38
rs780114224	Chr.12: 40929769-40929769 on Build GRCh38
rs146088900	Chr.12: 40929911-40929911 on Build GRCh38
rs751975420	Chr.12: 40929746-40929746 on Build GRCh38
rs142799954	Chr.12: 40929779-40929779 on Build GRCh38
rs774907531	Chr.12: 40930002-40930002 on Build GRCh38
rs745687222	Chr.12: 40930046-40930046 on Build GRCh38
rs746981200	Chr.12: 40929932-40929932 on Build GRCh38
rs769749210	Chr.12: 40930048-40930048 on Build GRCh38
rs370940612	Chr.12: 40930024-40930024 on Build GRCh38
rs1019239823	Chr.12: 40929749-40929749 on Build GRCh38
rs995468192	Chr.12: 40929704-40929704 on Build GRCh38
rs763560467	Chr.12: 40929994-40929994 on Build GRCh38
rs761319223	Chr.12: 40930038-40930039 on Build GRCh38
rs752293954	Chr.12: 40929951-40929951 on Build GRCh38
rs757618456	Chr.12: 40929874-40929874 on Build GRCh38
rs371168812	Chr.12: 40930033-40930033 on Build GRCh38
rs1025576721	Chr.12: 40930064-40930064 on Build GRCh38
rs767811479	Chr.12: 40930016-40930016 on Build GRCh38
rs982045496	Chr.12: 40930208-40930208 on Build GRCh38
rs563673101	Chr.12: 40930123-40930123 on Build GRCh38
rs375395772	Chr.12: 40930034-40930034 on Build GRCh38
rs896552364	Chr.12: 40930018-40930018 on Build GRCh38
rs752046046	Chr.12: 40929872-40929872 on Build GRCh38
rs775098655	Chr.12: 40929984-40929984 on Build GRCh38
rs748951560	Chr.12: 40930051-40930051 on Build GRCh38

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