Product Details

Primer Sequences

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Primer Chromosome Location

Chr.19: 50666106-50666379 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

SHANK1

Entrez Gene ID

50944

Gene Name

SH3 and multiple ankyrin repeat domains 1

Gene Aliases

SPANK-1, SSTRIP, synamon

UniGene

Hs.274255

Gene Chromosome Location

Chr.19: 50659257-50719779 on Build GRCh38

Transcripts

NM_016148.3 XM_006723233.3 XM_011527013.2 XM_011527014.2

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4080454	c.3777T>C	p.S1259S	Chr.19: 50666344-50666344 on Build GRCh38
5004066	c.3807G>A	p.G1269G	Chr.19: 50666314-50666314 on Build GRCh38
7147026	c.5582C>T	p.S1861L	Chr.19: 50666378-50666378 on Build GRCh38
1712642	c.3866G>A	p.G1289E	Chr.19: 50666255-50666255 on Build GRCh38
6038248	c.3752C>A	p.A1251D	Chr.19: 50666369-50666369 on Build GRCh38
4861529	c.3791A>C	p.K1264T	Chr.19: 50666330-50666330 on Build GRCh38
5991274	c.5585C>T	p.A1862V	Chr.19: 50666375-50666375 on Build GRCh38
2755032	c.5667C>T	p.G1889G	Chr.19: 50666293-50666293 on Build GRCh38
5801185	c.3809delG	p.G1270fs*250	Chr.19: 50666312-50666312 on Build GRCh38
4080453	c.5616T>C	p.S1872S	Chr.19: 50666344-50666344 on Build GRCh38
4885301	c.5664C>A	p.G1888G	Chr.19: 50666296-50666296 on Build GRCh38
4500874	c.3914C>T	p.S1305F	Chr.19: 50666207-50666207 on Build GRCh38
1681243	c.3792G>T	p.K1264N	Chr.19: 50666329-50666329 on Build GRCh38
4596077	c.5584G>A	p.A1862T	Chr.19: 50666376-50666376 on Build GRCh38
5991275	c.3746C>T	p.A1249V	Chr.19: 50666375-50666375 on Build GRCh38
713275	c.5630A>C	p.K1877T	Chr.19: 50666330-50666330 on Build GRCh38
5991277	c.3745G>T	p.A1249S	Chr.19: 50666376-50666376 on Build GRCh38
4887431	c.5681C>A	p.A1894D	Chr.19: 50666279-50666279 on Build GRCh38
6777495	c.5691C>T	p.G1897G	Chr.19: 50666293-50666293 on Build GRCh38
6038247	c.5591C>A	p.A1864D	Chr.19: 50666369-50666369 on Build GRCh38
1712641	c.5705G>A	p.G1902E	Chr.19: 50666255-50666255 on Build GRCh38
6220586	c.3864C>T	p.G1288G	Chr.19: 50666257-50666257 on Build GRCh38
7147028	c.3743C>T	p.S1248L	Chr.19: 50666378-50666378 on Build GRCh38
4885302	c.3825C>A	p.G1275G	Chr.19: 50666296-50666296 on Build GRCh38
4887432	c.3842C>A	p.A1281D	Chr.19: 50666279-50666279 on Build GRCh38
1395524	c.5760G>A	p.Q1920Q	Chr.19: 50666200-50666200 on Build GRCh38
4596078	c.3745G>A	p.A1249T	Chr.19: 50666376-50666376 on Build GRCh38
1395525	c.5740G>A	p.E1914K	Chr.19: 50666220-50666220 on Build GRCh38
1681242	c.5631G>T	p.K1877N	Chr.19: 50666329-50666329 on Build GRCh38
4500873	c.5753C>T	p.S1918F	Chr.19: 50666207-50666207 on Build GRCh38
5991276	c.5584G>T	p.A1862S	Chr.19: 50666376-50666376 on Build GRCh38
2755033	c.3828C>T	p.G1276G	Chr.19: 50666293-50666293 on Build GRCh38
5801184	c.5648delG	p.G1883fs*250	Chr.19: 50666312-50666312 on Build GRCh38
6777520	c.5664C>T	p.G1888G	Chr.19: 50666296-50666296 on Build GRCh38
4782986	c.3921G>A	p.Q1307Q	Chr.19: 50666200-50666200 on Build GRCh38
5680617	c.5654C>A	p.S1885*	Chr.19: 50666306-50666306 on Build GRCh38
6777521	c.5688C>T	p.G1896G	Chr.19: 50666296-50666296 on Build GRCh38
5004065	c.5646G>A	p.G1882G	Chr.19: 50666314-50666314 on Build GRCh38
7147027	c.5606C>T	p.S1869L	Chr.19: 50666378-50666378 on Build GRCh38
6220585	c.5703C>T	p.G1901G	Chr.19: 50666257-50666257 on Build GRCh38
5680618	c.3815C>A	p.S1272*	Chr.19: 50666306-50666306 on Build GRCh38
4784826	c.3901G>A	p.E1301K	Chr.19: 50666220-50666220 on Build GRCh38
6777522	c.3825C>T	p.G1275G	Chr.19: 50666296-50666296 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs199998427	Chr.19: 50666221-50666221 on Build GRCh38
rs566966888	Chr.19: 50666249-50666249 on Build GRCh38
rs200413731	Chr.19: 50666228-50666228 on Build GRCh38
rs760583150	Chr.19: 50666161-50666161 on Build GRCh38
rs1053704446	Chr.19: 50666125-50666125 on Build GRCh38
rs761631160	Chr.19: 50666318-50666318 on Build GRCh38
rs774314308	Chr.19: 50666239-50666239 on Build GRCh38
rs764656035	Chr.19: 50666211-50666211 on Build GRCh38
rs771405315	Chr.19: 50666237-50666237 on Build GRCh38
rs778008546	Chr.19: 50666288-50666288 on Build GRCh38
rs776419436	Chr.19: 50666257-50666257 on Build GRCh38
rs776315087	Chr.19: 50666317-50666317 on Build GRCh38
rs746633558	Chr.19: 50666226-50666226 on Build GRCh38
rs757212977	Chr.19: 50666210-50666210 on Build GRCh38
rs1011658644	Chr.19: 50666265-50666265 on Build GRCh38
rs772243664	Chr.19: 50666241-50666241 on Build GRCh38
rs772335528	Chr.19: 50666311-50666311 on Build GRCh38
rs754623779	Chr.19: 50666280-50666280 on Build GRCh38
rs780276977	Chr.19: 50666312-50666312 on Build GRCh38
rs942428865	Chr.19: 50666138-50666138 on Build GRCh38
rs549430068	Chr.19: 50666256-50666256 on Build GRCh38
rs370229569	Chr.19: 50666242-50666242 on Build GRCh38
rs201606756	Chr.19: 50666293-50666293 on Build GRCh38
rs1047443510	Chr.19: 50666199-50666199 on Build GRCh38
rs779510181	Chr.19: 50666305-50666305 on Build GRCh38
rs919787764	Chr.19: 50666162-50666162 on Build GRCh38
rs757732528	Chr.19: 50666296-50666296 on Build GRCh38
rs567195198	Chr.19: 50666259-50666259 on Build GRCh38
rs894526598	Chr.19: 50666248-50666248 on Build GRCh38
rs749935034	Chr.19: 50666271-50666271 on Build GRCh38
rs369466131	Chr.19: 50666143-50666143 on Build GRCh38
rs768863534	Chr.19: 50666314-50666314 on Build GRCh38
rs774711022	Chr.19: 50666290-50666298 on Build GRCh38
rs763958004	Chr.19: 50666185-50666185 on Build GRCh38
rs761668537	Chr.19: 50666258-50666258 on Build GRCh38
rs1046503378	Chr.19: 50666173-50666173 on Build GRCh38
rs778191544	Chr.19: 50666230-50666230 on Build GRCh38
rs374550090	Chr.19: 50666186-50666186 on Build GRCh38
rs192533917	Chr.19: 50666231-50666231 on Build GRCh38
rs751275163	Chr.19: 50666276-50666276 on Build GRCh38
rs745901446	Chr.19: 50666240-50666240 on Build GRCh38
rs549051295	Chr.19: 50666220-50666220 on Build GRCh38
rs779642061	Chr.19: 50666222-50666222 on Build GRCh38
rs945432764	Chr.19: 50666168-50666168 on Build GRCh38

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