Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: CD44
Entrez Gene ID: 960
Gene Name: CD44 molecule (Indian blood group)
Gene Aliases: CDW44, CSPG8, ECMR-III, HCELL, HUTCH-I, IN, LHR, MC56, MDU2, MDU3, MIC4, Pgp1
Chromosome Location: Chr.11: 35138870 - 35232402 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_000610.3	NP_000601.3	14 - 15	2247	128
	NM_001001389.1	NP_001001389.1	13 - 14	2118	128
	NM_001001390.1	NP_001001390.1	8 - 9	1500	128
	NM_001202555.1	NP_001189484.1	6 - 7	1308	128
	XM_005253231.2	XP_005253288.1	14 - 15	1977	128
	XM_005253232.2	XP_005253289.1	14 - 15	1974	128
	XM_005253233.2	XP_005253290.1	13 - 14	1857	128
	XM_005253234.2	XP_005253291.1	13 - 14	1854	128
	XM_005253235.2	XP_005253292.1	13 - 14	1848	128
	XM_005253238.2	XP_005253295.1	10 - 11	1488	128
	XM_005253239.2	XP_005253296.1	10 - 11	1482	128
	XM_005253240.2	XP_005253297.1	9 - 10	1353	128
	XM_006718388.1	XP_006718451.1	14 - 15	1971	128
	XM_011520483.1	XP_011518785.1	12 - 13	1722	128
	XM_011520484.1	XP_011518786.1	12 - 13	1719	128
	XM_011520485.1	XP_011518787.1	12 - 13	1716	128
	XM_011520486.1	XP_011518788.1	9 - 10	1359	128
	XM_017018583.1	XP_016874072.1	13 - 14	1845	128
GenBank mRNA	AJ251595.1	-	14 - 15	1991	128
	AK304467.1	-	4 - 5	607	128
	AK307707.1	-	4 - 5	565	128
	AY101192.1	-	8 - 9	1182	128
	BC004372.1	-	13 - 14	1815	128
	BG946113.1	-	4 - 5	493	128
	EF581837.1	-	6 - 7	885	128
	S66400.1	-	8 - 9	1116	128
	S82326.1	-	5 - 6	376	128
	X55150.1	-	8 - 9	1189	128
	X56794.1	-	8 - 9	1181	128
	X66733.1	-	13 - 14	1813	128