Product Details

Primer Sequences
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Primer Chromosome Location
Chr.12: 47975176-47975695 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer™ Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
COL2A1
Entrez Gene ID
1280
Gene Name
collagen type II alpha 1 chain
Gene Aliases
ANFH, AOM, COL11A3, SEDC, STL1
UniGene
Hs.408182
Gene Chromosome Location
Chr.12: 47972965-48006212 on Build GRCh38
Transcripts
NM_001844.4 NM_033150.2 XM_017018828.1 XM_017018829.1 XM_017018830.1 XM_017018831.1

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
6445782 c.3714C>T p.Y1238Y Chr.12: 47975489-47975489 on Build GRCh38
5051604 c.3842G>A p.R1281H Chr.12: 47975361-47975361 on Build GRCh38
3731116 c.3511C>T p.R1171W Chr.12: 47975485-47975485 on Build GRCh38
6420801 c.3818A>T p.E1273V Chr.12: 47975385-47975385 on Build GRCh38
3461236 c.3401G>A p.G1134E Chr.12: 47975595-47975595 on Build GRCh38
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SNP Detail

SNP ID Chromosome Location
rs932258871 Chr.12: 47975313-47975313 on Build GRCh38
rs375710692 Chr.12: 47975564-47975564 on Build GRCh38
rs551400443 Chr.12: 47975446-47975446 on Build GRCh38
rs746665798 Chr.12: 47975481-47975481 on Build GRCh38
rs758192023 Chr.12: 47975543-47975543 on Build GRCh38
rs778838205 Chr.12: 47975386-47975386 on Build GRCh38
rs754979576 Chr.12: 47975459-47975459 on Build GRCh38
rs151185355 Chr.12: 47975387-47975387 on Build GRCh38
rs794727748 Chr.12: 47975409-47975412 on Build GRCh38
rs866625668 Chr.12: 47975296-47975296 on Build GRCh38
rs139957398 Chr.12: 47975333-47975333 on Build GRCh38
rs149903770 Chr.12: 47975442-47975442 on Build GRCh38
rs756687549 Chr.12: 47975620-47975623 on Build GRCh38
rs764309847 Chr.12: 47975362-47975362 on Build GRCh38
rs142168567 Chr.12: 47975376-47975376 on Build GRCh38
rs966259355 Chr.12: 47975561-47975561 on Build GRCh38
rs199726428 Chr.12: 47975490-47975490 on Build GRCh38
rs4760608 Chr.12: 47975206-47975206 on Build GRCh38
rs995646562 Chr.12: 47975539-47975539 on Build GRCh38
rs865986968 Chr.12: 47975668-47975668 on Build GRCh38
rs886049445 Chr.12: 47975544-47975544 on Build GRCh38
rs1044524630 Chr.12: 47975337-47975337 on Build GRCh38
rs139114389 Chr.12: 47975417-47975417 on Build GRCh38
rs769035328 Chr.12: 47975497-47975497 on Build GRCh38
rs751251798 Chr.12: 47975547-47975547 on Build GRCh38
rs973798333 Chr.12: 47975279-47975279 on Build GRCh38
rs750001244 Chr.12: 47975655-47975655 on Build GRCh38
rs200136879 Chr.12: 47975488-47975488 on Build GRCh38
rs771631501 Chr.12: 47975394-47975394 on Build GRCh38
rs763932844 Chr.12: 47975546-47975546 on Build GRCh38
rs771674967 Chr.12: 47975288-47975288 on Build GRCh38
rs561122180 Chr.12: 47975263-47975263 on Build GRCh38
rs546672421 Chr.12: 47975317-47975317 on Build GRCh38
rs749114983 Chr.12: 47975275-47975275 on Build GRCh38
rs141944722 Chr.12: 47975504-47975504 on Build GRCh38
rs773522709 Chr.12: 47975639-47975639 on Build GRCh38
rs763097721 Chr.12: 47975361-47975361 on Build GRCh38
rs752469047 Chr.12: 47975468-47975468 on Build GRCh38
rs2276459 Chr.12: 47975540-47975540 on Build GRCh38
rs375342062 Chr.12: 47975619-47975619 on Build GRCh38
rs374450416 Chr.12: 47975551-47975551 on Build GRCh38
rs760889630 Chr.12: 47975654-47975654 on Build GRCh38
rs373684149 Chr.12: 47975443-47975443 on Build GRCh38
rs377079894 Chr.12: 47975447-47975447 on Build GRCh38
rs765111818 Chr.12: 47975528-47975528 on Build GRCh38
rs147569641 Chr.12: 47975467-47975467 on Build GRCh38
rs56196515 Chr.12: 47975242-47975242 on Build GRCh38
rs778309871 Chr.12: 47975620-47975621 on Build GRCh38
rs775874428 Chr.12: 47975559-47975559 on Build GRCh38
rs758166120 Chr.12: 47975471-47975471 on Build GRCh38
rs553076996 Chr.12: 47975667-47975667 on Build GRCh38
rs370247812 Chr.12: 47975421-47975421 on Build GRCh38
rs1015302438 Chr.12: 47975229-47975229 on Build GRCh38
rs760165835 Chr.12: 47975300-47975300 on Build GRCh38
rs765581527 Chr.12: 47975352-47975352 on Build GRCh38
rs770394385 Chr.12: 47975408-47975408 on Build GRCh38
rs374360275 Chr.12: 47975401-47975401 on Build GRCh38
rs774190623 Chr.12: 47975284-47975284 on Build GRCh38
rs36087308 Chr.12: 47975262-47975262 on Build GRCh38
rs761840345 Chr.12: 47975444-47975444 on Build GRCh38
rs1006482371 Chr.12: 47975348-47975348 on Build GRCh38
rs775722051 Chr.12: 47975429-47975429 on Build GRCh38
rs946580388 Chr.12: 47975240-47975240 on Build GRCh38
rs944838931 Chr.12: 47975336-47975336 on Build GRCh38
rs767791258 Chr.12: 47975519-47975519 on Build GRCh38
rs886049444 Chr.12: 47975395-47975395 on Build GRCh38
rs916625019 Chr.12: 47975215-47975215 on Build GRCh38
rs760093841 Chr.12: 47975548-47975548 on Build GRCh38
rs774792988 Chr.12: 47975613-47975613 on Build GRCh38
rs776705338 Chr.12: 47975517-47975517 on Build GRCh38
rs374082762 Chr.12: 47975485-47975485 on Build GRCh38
rs76104937 Chr.12: 47975624-47975624 on Build GRCh38
rs891008017 Chr.12: 47975501-47975501 on Build GRCh38
rs780783419 Chr.12: 47975549-47975549 on Build GRCh38
rs369672046 Chr.12: 47975377-47975377 on Build GRCh38
rs200993187 Chr.12: 47975480-47975480 on Build GRCh38
rs751620405 Chr.12: 47975369-47975369 on Build GRCh38
rs749799630 Chr.12: 47975582-47975582 on Build GRCh38
rs772459210 Chr.12: 47975625-47975625 on Build GRCh38
rs770482348 Chr.12: 47975484-47975484 on Build GRCh38
rs777098611 Chr.12: 47975332-47975332 on Build GRCh38
rs905184041 Chr.12: 47975479-47975479 on Build GRCh38
rs770224588 Chr.12: 47975423-47975423 on Build GRCh38
rs914039852 Chr.12: 47975597-47975597 on Build GRCh38
rs772611684 Chr.12: 47975290-47975290 on Build GRCh38
rs752970787 Chr.12: 47975360-47975360 on Build GRCh38
rs898197715 Chr.12: 47975368-47975368 on Build GRCh38
rs763340509 Chr.12: 47975611-47975611 on Build GRCh38
rs201635345 Chr.12: 47975383-47975383 on Build GRCh38
rs768961816 Chr.12: 47975584-47975584 on Build GRCh38
rs886626700 Chr.12: 47975566-47975566 on Build GRCh38
rs1635559 Chr.12: 47975585-47975585 on Build GRCh38
rs371974287 Chr.12: 47975520-47975520 on Build GRCh38
rs530173097 Chr.12: 47975294-47975294 on Build GRCh38
rs368270799 Chr.12: 47975496-47975496 on Build GRCh38
rs747755514 Chr.12: 47975287-47975287 on Build GRCh38
rs139627081 Chr.12: 47975212-47975212 on Build GRCh38

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