Product Details

Primer Sequences

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Primer Chromosome Location

Chr.1: 102889342-102889575 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

COL11A1

Entrez Gene ID

1301

Gene Name

collagen type XI alpha 1 chain

Gene Aliases

CO11A1, COLL6, STL2

UniGene

Hs.523446

Gene Chromosome Location

Chr.1: 102876467-103108580 on Build GRCh38

Transcripts

NM_001190709.1 NM_001854.3 NM_080629.2 NM_080630.3 NR_134980.1 XM_017000334.1 XM_017000335.1 XM_017000337.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4454269	c.4489A>T	p.K1497*	Chr.1: 102889466-102889466 on Build GRCh38
4548085	c.4394G>A	p.G1465E	Chr.1: 102889561-102889561 on Build GRCh38
674664	c.4483G>T	p.G1495*	Chr.1: 102889472-102889472 on Build GRCh38
3470433	c.4380G>A	p.L1460L	Chr.1: 102889539-102889539 on Build GRCh38
4494915	c.4391C>T	p.P1464L	Chr.1: 102889528-102889528 on Build GRCh38
239389	c.4469C>A	p.T1490N	Chr.1: 102889486-102889486 on Build GRCh38
6120287	c.4363C>T	p.P1455S	Chr.1: 102889556-102889556 on Build GRCh38
7231942	c.4402G>T	p.G1468W	Chr.1: 102889517-102889517 on Build GRCh38
1320199	c.4468A>T	p.T1490S	Chr.1: 102889487-102889487 on Build GRCh38
4958462	c.4486G>A	p.A1496T	Chr.1: 102889469-102889469 on Build GRCh38
4548086	c.4358G>A	p.G1453E	Chr.1: 102889561-102889561 on Build GRCh38
397603	c.4457G>T	p.G1486V	Chr.1: 102889498-102889498 on Build GRCh38
1559246	c.4452C>A	p.D1484E	Chr.1: 102889503-102889503 on Build GRCh38
6527714	c.4431A>G	p.G1477G	Chr.1: 102889488-102889488 on Build GRCh38
462494	c.4438G>A	p.G1480R	Chr.1: 102889481-102889481 on Build GRCh38
674665	c.4447G>T	p.G1483*	Chr.1: 102889472-102889472 on Build GRCh38
3975757	c.4403G>T	p.G1468V	Chr.1: 102889516-102889516 on Build GRCh38
5042278	c.4420G>A	p.G1474R	Chr.1: 102889499-102889499 on Build GRCh38
5577359	c.4404G>A	p.G1468G	Chr.1: 102889515-102889515 on Build GRCh38
5897261	c.4442C>T	p.S1481F	Chr.1: 102889477-102889477 on Build GRCh38
1192759	c.4410delA	p.G1471fs*27	Chr.1: 102889509-102889509 on Build GRCh38
4494914	c.4427C>T	p.P1476L	Chr.1: 102889528-102889528 on Build GRCh38
3470430	c.4441G>A	p.E1481K	Chr.1: 102889514-102889514 on Build GRCh38
4880502	c.4398T>A	p.H1466Q	Chr.1: 102889557-102889557 on Build GRCh38
1320200	c.4432A>T	p.T1478S	Chr.1: 102889487-102889487 on Build GRCh38
6312324	c.4463C>A	p.P1488H	Chr.1: 102889492-102889492 on Build GRCh38
4958463	c.4450G>A	p.A1484T	Chr.1: 102889469-102889469 on Build GRCh38
5042277	c.4456G>A	p.G1486R	Chr.1: 102889499-102889499 on Build GRCh38
5938613	c.4439G>A	p.G1480E	Chr.1: 102889516-102889516 on Build GRCh38
7403388	c.4393-2A>T	p.?	Chr.1: 102889564-102889564 on Build GRCh38
6049092	c.4394G>T	p.G1465V	Chr.1: 102889561-102889561 on Build GRCh38
397604	c.4421G>T	p.G1474V	Chr.1: 102889498-102889498 on Build GRCh38
5353639	c.4417C>T	p.R1473*	Chr.1: 102889502-102889502 on Build GRCh38
5098327	c.4357-9C>A	p.?	Chr.1: 102889571-102889571 on Build GRCh38
6120286	c.4399C>T	p.P1467S	Chr.1: 102889556-102889556 on Build GRCh38
4673479	c.4431A>T	p.G1477G	Chr.1: 102889524-102889524 on Build GRCh38
1248729	c.4410A>G	p.K1470K	Chr.1: 102889509-102889509 on Build GRCh38
3470431	c.4405G>A	p.E1469K	Chr.1: 102889514-102889514 on Build GRCh38
3975758	c.4438G>A	p.G1480R	Chr.1: 102889517-102889517 on Build GRCh38
1192758	c.4446delA	p.G1483fs*27	Chr.1: 102889509-102889509 on Build GRCh38
6507559	c.4400A>T	p.Q1467L	Chr.1: 102889519-102889519 on Build GRCh38
6120289	c.4459G>T	p.D1487Y	Chr.1: 102889460-102889460 on Build GRCh38
6527713	c.4467A>G	p.G1489G	Chr.1: 102889488-102889488 on Build GRCh38
5938614	c.4403G>A	p.G1468E	Chr.1: 102889516-102889516 on Build GRCh38
7231943	c.4438G>T	p.G1480W	Chr.1: 102889517-102889517 on Build GRCh38
4454270	c.4453A>T	p.K1485*	Chr.1: 102889466-102889466 on Build GRCh38
370356	c.4418G>T	p.R1473L	Chr.1: 102889501-102889501 on Build GRCh38
4019968	c.4405T>G	p.L1469V	Chr.1: 102889550-102889550 on Build GRCh38
3975759	c.4402G>A	p.G1468R	Chr.1: 102889517-102889517 on Build GRCh38
5353638	c.4453C>T	p.R1485*	Chr.1: 102889502-102889502 on Build GRCh38
1248728	c.4446A>G	p.K1482K	Chr.1: 102889509-102889509 on Build GRCh38
3470432	c.4416G>A	p.L1472L	Chr.1: 102889539-102889539 on Build GRCh38
5577358	c.4440G>A	p.G1480G	Chr.1: 102889515-102889515 on Build GRCh38
4673480	c.4395A>T	p.G1465G	Chr.1: 102889524-102889524 on Build GRCh38
1559247	c.4416C>A	p.D1472E	Chr.1: 102889503-102889503 on Build GRCh38
4019969	c.4369T>G	p.L1457V	Chr.1: 102889550-102889550 on Build GRCh38
5897260	c.4478C>T	p.S1493F	Chr.1: 102889477-102889477 on Build GRCh38
6049093	c.4358G>T	p.G1453V	Chr.1: 102889561-102889561 on Build GRCh38
7403387	c.4357-2A>T	p.?	Chr.1: 102889564-102889564 on Build GRCh38
6507558	c.4436A>T	p.Q1479L	Chr.1: 102889519-102889519 on Build GRCh38
370355	c.4454G>T	p.R1485L	Chr.1: 102889501-102889501 on Build GRCh38
4880503	c.4362T>A	p.H1454Q	Chr.1: 102889557-102889557 on Build GRCh38
3975756	c.4439G>T	p.G1480V	Chr.1: 102889516-102889516 on Build GRCh38
5684301	c.4484G>C	p.G1495A	Chr.1: 102889471-102889471 on Build GRCh38
6312325	c.4427C>A	p.P1476H	Chr.1: 102889492-102889492 on Build GRCh38
5684302	c.4448G>C	p.G1483A	Chr.1: 102889471-102889471 on Build GRCh38
6120288	c.4495G>T	p.D1499Y	Chr.1: 102889460-102889460 on Build GRCh38
462493	c.4474G>A	p.G1492R	Chr.1: 102889481-102889481 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs970605834	Chr.1: 102889438-102889438 on Build GRCh38
rs781508026	Chr.1: 102889414-102889414 on Build GRCh38
rs917541931	Chr.1: 102889542-102889542 on Build GRCh38
rs762282588	Chr.1: 102889441-102889441 on Build GRCh38
rs376841140	Chr.1: 102889494-102889494 on Build GRCh38
rs768590245	Chr.1: 102889515-102889515 on Build GRCh38
rs369947899	Chr.1: 102889501-102889501 on Build GRCh38
rs748557200	Chr.1: 102889536-102889536 on Build GRCh38
rs202194245	Chr.1: 102889531-102889531 on Build GRCh38
rs758235552	Chr.1: 102889496-102889496 on Build GRCh38
rs773023575	Chr.1: 102889461-102889461 on Build GRCh38
rs180734278	Chr.1: 102889539-102889539 on Build GRCh38
rs764225064	Chr.1: 102889404-102889405 on Build GRCh38
rs753455066	Chr.1: 102889479-102889479 on Build GRCh38
rs773776234	Chr.1: 102889547-102889547 on Build GRCh38
rs772289485	Chr.1: 102889448-102889448 on Build GRCh38
rs71094579	Chr.1: 102889410-102889411 on Build GRCh38
rs956114369	Chr.1: 102889416-102889416 on Build GRCh38
rs753965353	Chr.1: 102889409-102889410 on Build GRCh38
rs867331843	Chr.1: 102889516-102889516 on Build GRCh38
rs866621880	Chr.1: 102889493-102889493 on Build GRCh38
rs780241838	Chr.1: 102889506-102889506 on Build GRCh38
rs765257116	Chr.1: 102889483-102889483 on Build GRCh38
rs113226085	Chr.1: 102889383-102889384 on Build GRCh38
rs758096197	Chr.1: 102889413-102889413 on Build GRCh38
rs774699566	Chr.1: 102889440-102889440 on Build GRCh38
rs55821405	Chr.1: 102889503-102889503 on Build GRCh38
rs749419834	Chr.1: 102889507-102889507 on Build GRCh38
rs766122412	Chr.1: 102889470-102889470 on Build GRCh38
rs765529267	Chr.1: 102889412-102889413 on Build GRCh38
rs777371253	Chr.1: 102889497-102889497 on Build GRCh38
rs777643087	Chr.1: 102889385-102889386 on Build GRCh38
rs759091446	Chr.1: 102889480-102889480 on Build GRCh38
rs780043168	Chr.1: 102889428-102889428 on Build GRCh38
rs769264112	Chr.1: 102889433-102889433 on Build GRCh38
rs769875026	Chr.1: 102889415-102889415 on Build GRCh38
rs778698174	Chr.1: 102889411-102889411 on Build GRCh38
rs866783525	Chr.1: 102889523-102889523 on Build GRCh38
rs760349942	Chr.1: 102889468-102889468 on Build GRCh38
rs1031753653	Chr.1: 102889405-102889405 on Build GRCh38
rs755030542	Chr.1: 102889404-102889404 on Build GRCh38

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