Product Details

Primer Sequences

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Primer Chromosome Location

Chr.2: 216414972-216415468 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

SMARCAL1

Entrez Gene ID

50485

Gene Name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1

Gene Aliases

HARP, HHARP

UniGene

Hs.516674

Gene Chromosome Location

Chr.2: 216412414-216483053 on Build GRCh38

Transcripts

NM_001127207.1 NM_014140.3 XM_005246631.2 XM_005246632.1 XM_017004228.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
1631834	c.335G>A	p.S112N	Chr.2: 216415039-216415039 on Build GRCh38
4091329	c.740G>A	p.R247H	Chr.2: 216415444-216415444 on Build GRCh38
7102468	c.405A>G	p.K135K	Chr.2: 216415109-216415109 on Build GRCh38
4091328	c.730A>G	p.N244D	Chr.2: 216415434-216415434 on Build GRCh38
6784941	c.645G>A	p.T215T	Chr.2: 216415349-216415349 on Build GRCh38
6999398	c.341G>A	p.R114H	Chr.2: 216415045-216415045 on Build GRCh38
476893	c.638G>C	p.S213T	Chr.2: 216415342-216415342 on Build GRCh38
1016232	c.736G>A	p.D246N	Chr.2: 216415440-216415440 on Build GRCh38
4091327	c.381A>G	p.A127A	Chr.2: 216415085-216415085 on Build GRCh38
1016231	c.537T>C	p.H179H	Chr.2: 216415241-216415241 on Build GRCh38
6893607	c.691C>T	p.Q231*	Chr.2: 216415395-216415395 on Build GRCh38
3391463	c.609C>A	p.N203K	Chr.2: 216415313-216415313 on Build GRCh38
6543932	c.753G>T	p.L251F	Chr.2: 216415457-216415457 on Build GRCh38
1016230	c.390T>C	p.P130P	Chr.2: 216415094-216415094 on Build GRCh38
1482757	c.542C>G	p.S181C	Chr.2: 216415246-216415246 on Build GRCh38
1016229	c.366C>A	p.I122I	Chr.2: 216415070-216415070 on Build GRCh38
1482756	c.445C>G	p.Q149E	Chr.2: 216415149-216415149 on Build GRCh38
5794636	c.691C>G	p.Q231E	Chr.2: 216415395-216415395 on Build GRCh38
6496913	c.457G>C	p.E153Q	Chr.2: 216415161-216415161 on Build GRCh38
3991044	c.375C>G	p.P125P	Chr.2: 216415079-216415079 on Build GRCh38
4172292	c.364A>T	p.I122F	Chr.2: 216415068-216415068 on Build GRCh38
6039454	c.692delA	p.G233fs*2	Chr.2: 216415396-216415396 on Build GRCh38
4885425	c.319G>A	p.A107T	Chr.2: 216415023-216415023 on Build GRCh38
6784945	c.298A>G	p.K100E	Chr.2: 216415002-216415002 on Build GRCh38
1726151	c.747G>T	p.Q249H	Chr.2: 216415451-216415451 on Build GRCh38
3577574	c.539C>T	p.S180F	Chr.2: 216415243-216415243 on Build GRCh38
6784944	c.735C>A	p.G245G	Chr.2: 216415439-216415439 on Build GRCh38
7125501	c.417G>C	p.L139F	Chr.2: 216415121-216415121 on Build GRCh38
3577573	c.455C>T	p.P152L	Chr.2: 216415159-216415159 on Build GRCh38
5965204	c.599C>T	p.S200L	Chr.2: 216415303-216415303 on Build GRCh38
6156644	c.758G>T	p.G253V	Chr.2: 216415462-216415462 on Build GRCh38
5396175	c.744C>T	p.F248F	Chr.2: 216415448-216415448 on Build GRCh38
6784954	c.652A>G	p.T218A	Chr.2: 216415356-216415356 on Build GRCh38
5058648	c.734G>A	p.G245D	Chr.2: 216415438-216415438 on Build GRCh38
7224538	c.312G>A	p.M104I	Chr.2: 216415016-216415016 on Build GRCh38
4913731	c.579G>C	p.K193N	Chr.2: 216415283-216415283 on Build GRCh38
7203012	c.329G>A	p.G110D	Chr.2: 216415033-216415033 on Build GRCh38
5759194	c.490C>T	p.H164Y	Chr.2: 216415194-216415194 on Build GRCh38
3962387	c.312G>C	p.M104I	Chr.2: 216415016-216415016 on Build GRCh38
3909576	c.277C>T	p.Q93*	Chr.2: 216414981-216414981 on Build GRCh38
6784963	c.340C>T	p.R114C	Chr.2: 216415044-216415044 on Build GRCh38
78545	c.596C>G	p.P199R	Chr.2: 216415300-216415300 on Build GRCh38
4497477	c.497C>T	p.P166L	Chr.2: 216415201-216415201 on Build GRCh38
285201	c.614C>A	p.S205Y	Chr.2: 216415318-216415318 on Build GRCh38
7417485	c.705C>A	p.N235K	Chr.2: 216415409-216415409 on Build GRCh38
6296084	c.722G>T	p.C241F	Chr.2: 216415426-216415426 on Build GRCh38
5567754	c.687A>G	p.S229S	Chr.2: 216415391-216415391 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs922754263	Chr.2: 216415391-216415391 on Build GRCh38
rs11555797	Chr.2: 216415045-216415045 on Build GRCh38
rs748188404	Chr.2: 216415192-216415192 on Build GRCh38
rs756864375	Chr.2: 216415128-216415128 on Build GRCh38
rs906445943	Chr.2: 216415248-216415248 on Build GRCh38
rs947471355	Chr.2: 216415091-216415091 on Build GRCh38
rs778786012	Chr.2: 216415424-216415424 on Build GRCh38
rs151122737	Chr.2: 216415250-216415250 on Build GRCh38
rs376295895	Chr.2: 216415152-216415152 on Build GRCh38
rs751534116	Chr.2: 216415379-216415379 on Build GRCh38
rs749052447	Chr.2: 216415313-216415313 on Build GRCh38
rs774029345	Chr.2: 216415253-216415253 on Build GRCh38
rs749145673	Chr.2: 216415409-216415409 on Build GRCh38
rs201962302	Chr.2: 216415436-216415436 on Build GRCh38
rs760336986	Chr.2: 216415333-216415333 on Build GRCh38
rs776290743	Chr.2: 216415057-216415057 on Build GRCh38
rs765779796	Chr.2: 216415350-216415350 on Build GRCh38
rs777999697	Chr.2: 216415210-216415210 on Build GRCh38
rs372708949	Chr.2: 216415017-216415017 on Build GRCh38
rs371098968	Chr.2: 216415366-216415366 on Build GRCh38
rs768737511	Chr.2: 216415318-216415318 on Build GRCh38
rs1002105105	Chr.2: 216415285-216415285 on Build GRCh38
rs755477133	Chr.2: 216415270-216415270 on Build GRCh38
rs775634898	Chr.2: 216415222-216415222 on Build GRCh38
rs530505647	Chr.2: 216415304-216415304 on Build GRCh38
rs780006964	Chr.2: 216415308-216415308 on Build GRCh38
rs756174064	Chr.2: 216415370-216415371 on Build GRCh38
rs897578907	Chr.2: 216415134-216415134 on Build GRCh38
rs754147208	Chr.2: 216415269-216415269 on Build GRCh38
rs754343294	Chr.2: 216415159-216415159 on Build GRCh38
rs137914185	Chr.2: 216415437-216415437 on Build GRCh38
rs752739012	Chr.2: 216415295-216415295 on Build GRCh38
rs759332408	Chr.2: 216415060-216415060 on Build GRCh38
rs747775289	Chr.2: 216415231-216415231 on Build GRCh38
rs781023326	Chr.2: 216415119-216415120 on Build GRCh38
rs761271788	Chr.2: 216415325-216415325 on Build GRCh38
rs544173171	Chr.2: 216415353-216415353 on Build GRCh38
rs35907255	Chr.2: 216415127-216415127 on Build GRCh38
rs780581267	Chr.2: 216415157-216415157 on Build GRCh38
rs905827328	Chr.2: 216415135-216415135 on Build GRCh38
rs781515824	Chr.2: 216415402-216415402 on Build GRCh38
rs754228770	Chr.2: 216415342-216415342 on Build GRCh38
rs753215593	Chr.2: 216415352-216415352 on Build GRCh38
rs777896137	Chr.2: 216415303-216415303 on Build GRCh38
rs765629645	Chr.2: 216415442-216415442 on Build GRCh38
rs6734114	Chr.2: 216415323-216415323 on Build GRCh38
rs767158204	Chr.2: 216415130-216415130 on Build GRCh38
rs761014406	Chr.2: 216415263-216415263 on Build GRCh38
rs202031614	Chr.2: 216415044-216415044 on Build GRCh38
rs778801075	Chr.2: 216415215-216415215 on Build GRCh38
rs62178625	Chr.2: 216415083-216415083 on Build GRCh38
rs35406881	Chr.2: 216415297-216415297 on Build GRCh38
rs758472664	Chr.2: 216415355-216415355 on Build GRCh38
rs754790488	Chr.2: 216415413-216415413 on Build GRCh38
rs748106387	Chr.2: 216415427-216415427 on Build GRCh38
rs757584821	Chr.2: 216415394-216415394 on Build GRCh38
rs772275806	Chr.2: 216415052-216415052 on Build GRCh38
rs1015452878	Chr.2: 216415237-216415237 on Build GRCh38
rs771609695	Chr.2: 216415327-216415327 on Build GRCh38
rs758479373	Chr.2: 216415301-216415301 on Build GRCh38
rs35048226	Chr.2: 216415307-216415307 on Build GRCh38
rs985760536	Chr.2: 216415397-216415397 on Build GRCh38
rs910120660	Chr.2: 216415400-216415400 on Build GRCh38
rs1053318350	Chr.2: 216415078-216415078 on Build GRCh38
rs774325413	Chr.2: 216415319-216415319 on Build GRCh38
rs763691819	Chr.2: 216415097-216415097 on Build GRCh38
rs146658939	Chr.2: 216415430-216415430 on Build GRCh38
rs149567782	Chr.2: 216415000-216415000 on Build GRCh38
rs370414331	Chr.2: 216415414-216415414 on Build GRCh38
rs755113204	Chr.2: 216415172-216415172 on Build GRCh38
rs778973735	Chr.2: 216415190-216415190 on Build GRCh38
rs762590281	Chr.2: 216415086-216415086 on Build GRCh38
rs751582760	Chr.2: 216415325-216415325 on Build GRCh38
rs765946032	Chr.2: 216415339-216415339 on Build GRCh38
rs1046678608	Chr.2: 216415444-216415444 on Build GRCh38
rs750062612	Chr.2: 216415262-216415262 on Build GRCh38
rs765105653	Chr.2: 216415069-216415069 on Build GRCh38
rs375140716	Chr.2: 216415428-216415428 on Build GRCh38
rs761340743	Chr.2: 216415255-216415255 on Build GRCh38
rs376048935	Chr.2: 216415328-216415328 on Build GRCh38
rs759842283	Chr.2: 216415348-216415348 on Build GRCh38
rs768649610	Chr.2: 216415249-216415249 on Build GRCh38
rs865803048	Chr.2: 216415166-216415166 on Build GRCh38
rs779348137	Chr.2: 216415294-216415294 on Build GRCh38
rs781425240	Chr.2: 216414996-216414996 on Build GRCh38
rs534474398	Chr.2: 216415440-216415440 on Build GRCh38
rs772212169	Chr.2: 216415200-216415200 on Build GRCh38
rs766284659	Chr.2: 216415018-216415018 on Build GRCh38
rs149510554	Chr.2: 216415439-216415439 on Build GRCh38
rs1033691702	Chr.2: 216415291-216415291 on Build GRCh38
rs867970870	Chr.2: 216415443-216415443 on Build GRCh38
rs766719997	Chr.2: 216415268-216415268 on Build GRCh38
rs745698233	Chr.2: 216415212-216415212 on Build GRCh38

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