Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 140966993-140967236 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

PCDHA1

Entrez Gene ID

56147

Gene Name

protocadherin alpha 1

Gene Aliases

PCDH-ALPHA1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140786136-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA10

Entrez Gene ID

56139

Gene Name

protocadherin alpha 10

Gene Aliases

CNR8, CNRN8, CNRS8, CRNR8, PCDH-ALPHA10

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140855883-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA11

Entrez Gene ID

56138

Gene Name

protocadherin alpha 11

Gene Aliases

CNR7, CNRN7, CNRS7, CRNR7, PCDH-ALPHA11

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140867513-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA12

Entrez Gene ID

56137

Gene Name

protocadherin alpha 12

Gene Aliases

PCDH-ALPHA12

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140875302-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA13

Entrez Gene ID

56136

Gene Name

protocadherin alpha 13

Gene Aliases

CNR5, CNRN5, CNRS5, CRNR5, PCDH-ALPHA13

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140882269-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA2

Entrez Gene ID

56146

Gene Name

protocadherin alpha 2

Gene Aliases

PCDH-ALPHA2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140794859-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA3

Entrez Gene ID

56145

Gene Name

protocadherin alpha 3

Gene Aliases

PCDH-ALPHA3

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140801198-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA4

Entrez Gene ID

56144

Gene Name

protocadherin alpha 4

Gene Aliases

CNR1, CNRN1, CRNR1, PCDH-ALPHA4

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140807074-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA5

Entrez Gene ID

56143

Gene Name

protocadherin alpha 5

Gene Aliases

CNR6, CNRN6, CNRS6, CRNR6, PCDH-ALPHA5

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140821776-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA6

Entrez Gene ID

56142

Gene Name

protocadherin alpha 6

Gene Aliases

CNR2, CNRN2, CNRS2, CRNR2, PCDH-ALPHA6

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140827922-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA7

Entrez Gene ID

56141

Gene Name

protocadherin alpha 7

Gene Aliases

CNR4, CNRN4, CNRS4, CRNR4, PCDH-ALPHA7

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140834384-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA8

Entrez Gene ID

56140

Gene Name

protocadherin alpha 8

Gene Aliases

PCDH-ALPHA8

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140841322-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHA9

Entrez Gene ID

9752

Gene Name

protocadherin alpha 9

Gene Aliases

PCDH-ALPHA9

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140847772-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHAC1

Entrez Gene ID

56135

Gene Name

protocadherin alpha subfamily C, 1

Gene Aliases

PCDH-ALPHA-C1

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140926717-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Gene Symbol

PCDHAC2

Entrez Gene ID

56134

Gene Name

protocadherin alpha subfamily C, 2

Gene Aliases

PCDH-ALPHA-C2

UniGene

Hs.199343

Gene Chromosome Location

Chr.5: 140966162-141012344 on Build GRCh38

Transcripts

NM_018900.3 NM_031411.2 NM_018901.3 NM_031860.2 NM_018902.4 NM_018903.3 NM_018904.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_031857.1 NM_018898.3 NM_018899.5 NM_031883.2

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
6043892	c.395G>T	p.S132I	Chr.5: 140967161-140967161 on Build GRCh38
6740206	c.384C>A	p.P128P	Chr.5: 140967150-140967150 on Build GRCh38
1261328	c.277G>A	p.D93N	Chr.5: 140967043-140967043 on Build GRCh38
6740207	c.368T>C	p.V123A	Chr.5: 140967134-140967134 on Build GRCh38
5619089	c.361T>C	p.L121L	Chr.5: 140967127-140967127 on Build GRCh38
3851312	c.264C>T	p.R88R	Chr.5: 140967030-140967030 on Build GRCh38
3241416	c.271G>A	p.E91K	Chr.5: 140967037-140967037 on Build GRCh38
1219624	c.326C>T	p.A109V	Chr.5: 140967092-140967092 on Build GRCh38
1671946	c.374C>G	p.A125G	Chr.5: 140967140-140967140 on Build GRCh38
3241420	c.370C>A	p.L124M	Chr.5: 140967136-140967136 on Build GRCh38
6740203	c.294G>A	p.A98A	Chr.5: 140967060-140967060 on Build GRCh38
6740204	c.287G>A	p.S96N	Chr.5: 140967053-140967053 on Build GRCh38
1062409	c.347G>A	p.R116H	Chr.5: 140967113-140967113 on Build GRCh38
3241421	c.391G>A	p.V131M	Chr.5: 140967157-140967157 on Build GRCh38
6740205	c.448C>T	p.R150W	Chr.5: 140967214-140967214 on Build GRCh38
1062410	c.447G>A	p.P149P	Chr.5: 140967213-140967213 on Build GRCh38
269842	c.439C>T	p.R147C	Chr.5: 140967205-140967205 on Build GRCh38
121480	c.396C>T	p.S132S	Chr.5: 140967162-140967162 on Build GRCh38
265836	c.437C>T	p.P146L	Chr.5: 140967203-140967203 on Build GRCh38
4788930	c.242A>G	p.H81R	Chr.5: 140967008-140967008 on Build GRCh38
3610289	c.285G>A	p.T95T	Chr.5: 140967051-140967051 on Build GRCh38
3610290	c.363G>A	p.L121L	Chr.5: 140967129-140967129 on Build GRCh38
233065	c.409G>A	p.E137K	Chr.5: 140967175-140967175 on Build GRCh38
3610291	c.459C>T	p.Y153Y	Chr.5: 140967225-140967225 on Build GRCh38
5821392	c.338A>T	p.Q113L	Chr.5: 140967104-140967104 on Build GRCh38
1754049	c.364G>A	p.E122K	Chr.5: 140967130-140967130 on Build GRCh38
6373543	c.353T>C	p.L118P	Chr.5: 140967119-140967119 on Build GRCh38
6226322	c.232C>T	p.R78C	Chr.5: 140966998-140966998 on Build GRCh38
5709505	c.458A>C	p.Y153S	Chr.5: 140967224-140967224 on Build GRCh38
3851313	c.310C>T	p.R104C	Chr.5: 140967076-140967076 on Build GRCh38
6740210	c.327G>A	p.A109A	Chr.5: 140967093-140967093 on Build GRCh38
3851314	c.400G>A	p.V134I	Chr.5: 140967166-140967166 on Build GRCh38
4970769	c.227G>A	p.C76Y	Chr.5: 140966993-140966993 on Build GRCh38
3851315	c.404A>T	p.E135V	Chr.5: 140967170-140967170 on Build GRCh38
5643171	c.426C>T	p.N142N	Chr.5: 140967192-140967192 on Build GRCh38
5645031	c.237C>G	p.I79M	Chr.5: 140967003-140967003 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs782433025	Chr.5: 140967181-140967181 on Build GRCh38
rs782261207	Chr.5: 140967091-140967091 on Build GRCh38
rs782199698	Chr.5: 140967107-140967107 on Build GRCh38
rs782556858	Chr.5: 140967087-140967087 on Build GRCh38
rs376266648	Chr.5: 140967207-140967207 on Build GRCh38
rs563863114	Chr.5: 140967166-140967166 on Build GRCh38
rs782147091	Chr.5: 140967020-140967020 on Build GRCh38
rs374744732	Chr.5: 140967104-140967104 on Build GRCh38
rs782407413	Chr.5: 140967114-140967114 on Build GRCh38
rs781848948	Chr.5: 140967042-140967042 on Build GRCh38
rs370329233	Chr.5: 140967117-140967117 on Build GRCh38
rs782524334	Chr.5: 140967162-140967162 on Build GRCh38
rs782593106	Chr.5: 140967084-140967084 on Build GRCh38
rs782715200	Chr.5: 140967066-140967066 on Build GRCh38
rs782815903	Chr.5: 140967147-140967147 on Build GRCh38
rs146322183	Chr.5: 140967210-140967210 on Build GRCh38
rs1042081336	Chr.5: 140967144-140967144 on Build GRCh38
rs781942171	Chr.5: 140967080-140967080 on Build GRCh38
rs181864889	Chr.5: 140967171-140967171 on Build GRCh38
rs782387198	Chr.5: 140967124-140967124 on Build GRCh38
rs762120187	Chr.5: 140967164-140967164 on Build GRCh38
rs781981464	Chr.5: 140967191-140967191 on Build GRCh38
rs782344374	Chr.5: 140967092-140967092 on Build GRCh38
rs782810130	Chr.5: 140967034-140967034 on Build GRCh38
rs374670692	Chr.5: 140967119-140967119 on Build GRCh38
rs781831975	Chr.5: 140967070-140967070 on Build GRCh38
rs139717123	Chr.5: 140967213-140967213 on Build GRCh38
rs562713934	Chr.5: 140967172-140967172 on Build GRCh38
rs547096956	Chr.5: 140967167-140967167 on Build GRCh38
rs782089524	Chr.5: 140967135-140967135 on Build GRCh38
rs887648506	Chr.5: 140967019-140967019 on Build GRCh38
rs549238768	Chr.5: 140967211-140967211 on Build GRCh38
rs155808	Chr.5: 140967127-140967127 on Build GRCh38
rs781864120	Chr.5: 140967149-140967149 on Build GRCh38
rs782646028	Chr.5: 140967215-140967215 on Build GRCh38
rs781814682	Chr.5: 140967140-140967140 on Build GRCh38
rs782698899	Chr.5: 140967136-140967136 on Build GRCh38
rs155809	Chr.5: 140967085-140967085 on Build GRCh38
rs782123539	Chr.5: 140967049-140967049 on Build GRCh38
rs782158011	Chr.5: 140967146-140967146 on Build GRCh38
rs782811758	Chr.5: 140967101-140967102 on Build GRCh38

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