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LOADING
Gene Symbol:
KDM5D
Entrez Gene ID
8284
Gene Name:
lysine demethylase 5D
Gene Aliases
HY, HYA, JARID1D, SMCY
Gene Chromosome Location
Chr.Y: on Build GRCh38
UniGene
Hs.80358
Species:
Human
Primer Chromosome Location
Chr.Y: 19705337-19705832 on Build GRCh38
View in UCSC browser
Amplicon Length
496
Primer Sequences
Log in to view
Ampliseq ID's
Primer ID
Hs00403500_CE
Primer 5'-tail Option
Non-tailed
M13-tailed
Purification
Desalted
HPLC
Primer Pair /FWD/REV
Pair
Forward
Reverse
Synthesis Scale
25 nmol
Availability
Made To Order
Catalog #'s
A15629,A15630
Price
Add To Cart
Genomic Map
Assay Details
More Information
Genomic Map
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Assay Details
Gene Information
KDM5D
Accession
Protein
COSMIC ID
Mutation
AA
RefSeq
NM_001146705.1
NP_001140177.1
-
-
-
NM_001146706.1
NP_001140178.1
-
-
-
NM_004653.4
NP_004644.2
-
-
-
XM_005262560.2
XP_005262617.1
-
-
-
XM_005262561.2
XP_005262618.1
-
-
-
XM_011531468.2
XP_011529770.1
-
-
-
GenBank
AA864889.1
-
-
-
AK095923.1
-
-
-
AK127269.1
-
-
-
BC132721.1
-
-
-
BC144101.1
-
-
-
BC144102.1
-
-
-
BC146767.1
-
-
-
BM052719.1
-
-
-
BX648643.1
-
-
-
D87072.1
-
-
-
ENST00000317961.0
-
-
-
U52191.1
AAC50806.1
-
-
-
Phenotype
MIM: 426000
Literature Links:
KDM5D
PubMed Links
SNP ID
rs1011412176
rs762475514
rs1052862237
rs892903070
rs969929594
rs11549042
rs1002794198
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705477-19705477 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705483-19705483 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global
C (0.00)
(1.00)
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS
C (0.00)
(1.00)
African American - Not Available
YRI (Yoruba) - Not Available
SAS
C (0.00)
(1.00)
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR
C (0.00)
(1.00)
Japanese - Not Available
JPT (Japanese) - Not Available
EUR
C (0.00)
(1.00)
AMR
C (0.00)
(1.00)
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705403-19705403 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705474-19705474 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705663-19705663 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705801-19705801 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.Y: 19705786-19705786 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Back To Top
More Information
Set Membership:
Between 400-700 bp
Panther Classification:
Molecular Function -
histone modifying enzyme
Gene Ontology Categories:
Function(s)
Process(es)
T cell antigen processing and presentation
histone H3-K4 demethylation
oxidation-reduction process
DNA binding
zinc ion binding
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
histone demethylase activity
histone demethylase activity (H3-K4 specific)
Format:
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer
™
Tool Quick Reference
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Host server : magellan-search-5c7f9f6c68-89mxr:80/10.239.163.131:80.
git-commit: b16971a8df2afcd8df684aafbc9bf1e9f45e42d4
git-url: git@github.com:thermofisher/magellan-core.git
git-branch: origin/release/2.6.0-2024.04.15-1.0