Targeted DNA panels
for any genome

Design & order your panel


Customize with your genes
10 ng of input DNA
Design for any genome


12 to 6,144 amplicons per pool
One to hundreds of genes
96 barcodes for multiplexing


Just minutes to submit design
Automated primer design in 2 hours
Targeted library constructed in 3.5 hours

If the Ion AmpliSeq™ Ready-to-use Panels don't match your gene targets then simply select a subset of the targets or enter your specific genomic content online and we will design and create customized Ion AmpliSeq™ Panels just for you.

Creating and ordering custom panels is easy with the Ion AmpliSeq™ Designer—a free, online assay design tool that connects you directly to our assay design pipeline.  Panels can be designed against a number of preloaded genomes, or for any other organism by uploading your own FASTA file reference sequence.

Preloaded reference genomes available:

Custom panels are delivered in tubes of pre-pooled multiplexed primers in ready-to-use concentrations.  You can add 384-well plates to your order, in which each well contains individual primer pairs in concentrated format.  For custom panels with ≤96 primer pairs, you will receive 2,250 total reactions.  For custom panels with >96 primer pairs, you will receive 9,000 total reactions.

Design a panel


Ion AmpliSeq™ Designer Performance Specifications

Specifications* Current value
Input DNA amount per primer pool 10 ng
Available reference genomes Cow, chicken, human, maize, mouse, pig, rice, sheep, soybean, tomato
Custom references Upload any reference genome to a password-protected cloud space
Primer Pairs per pool 12 to 24,000
Target size 1 kb to 5 Mb
Target design rate >90%
Coverage uniformity >85%

*Performance values will vary with each custom design
Target design rate—bases covered by the insert region of amplicons out total target bases submitted
Typical coverage uniformity—bases covered at > 20% of the mean coverage
Analysis with Torrent Suite™ Software for diploid genes only