{"id":1272,"date":"2021-10-05T21:56:59","date_gmt":"2021-10-05T21:56:59","guid":{"rendered":"https:\/\/www.thermofisher.com\/blog\/life-in-the-lab\/?p=1272"},"modified":"2021-10-05T23:58:51","modified_gmt":"2021-10-05T23:58:51","slug":"a-brief-history-of-wastewater-testing-and-pathogen-detection","status":"publish","type":"post","link":"https:\/\/www.thermofisher.com\/blog\/life-in-the-lab\/a-brief-history-of-wastewater-testing-and-pathogen-detection\/","title":{"rendered":"A Brief History of Wastewater Testing and Pathogen Detection"},"content":{"rendered":"<p><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-1280 size-full\" src=\"http:\/\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/PG2156-PJT8107-COL017165-RESIZE-Wastewater-Testing-and-Automated-Solutions-Blog-Banner-GLOBAL-1600x350-1.jpg\" alt=\"\" width=\"1600\" height=\"350\" srcset=\"https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/PG2156-PJT8107-COL017165-RESIZE-Wastewater-Testing-and-Automated-Solutions-Blog-Banner-GLOBAL-1600x350-1.jpg 1600w, https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/PG2156-PJT8107-COL017165-RESIZE-Wastewater-Testing-and-Automated-Solutions-Blog-Banner-GLOBAL-1600x350-1-300x66.jpg 300w, https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/PG2156-PJT8107-COL017165-RESIZE-Wastewater-Testing-and-Automated-Solutions-Blog-Banner-GLOBAL-1600x350-1-1024x224.jpg 1024w, https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/PG2156-PJT8107-COL017165-RESIZE-Wastewater-Testing-and-Automated-Solutions-Blog-Banner-GLOBAL-1600x350-1-768x168.jpg 768w, https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/PG2156-PJT8107-COL017165-RESIZE-Wastewater-Testing-and-Automated-Solutions-Blog-Banner-GLOBAL-1600x350-1-1536x336.jpg 1536w\" sizes=\"auto, (max-width: 1600px) 100vw, 1600px\" \/><\/p>\n<p>Since humans started building permanent structures in which to live, even as far back as the\u00a0Babylonians around 4,000 B.C., we have sought to get our waste as far away from ourselves\u00a0as possible.<sup>1<\/sup> That effort has continued to the\u00a0 modern-day, where the sewers under our feet\u00a0carry <a href=\"https:\/\/on.nyc.gov\/3DblmkV\" target=\"_blank\" rel=\"noopener\">billions of gallons of waste<\/a> (every day!) away from our most populated areas.<sup>2<\/sup><\/p>\n<p>It is the pinnacle of \u2018out of sight, out of mind.\u2019<\/p>\n<p>But in flushing and forgetting our waste, we are also flushing a wealth of information about\u00a0our biology and the infectious diseases that threaten our health. What if, we could use our\u00a0waste to spot the outbreak of disease before a\u00a0 community even starts to show symptoms?\u00a0It\u2019s a powerful thought and one that could change public health. And it\u2019s not new. The\u00a0concept of <a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/life-science\/sequencing\/fragment-analysis\/fragment-analysis-applications\/pathogen-detection-and-analysis.html?icid=bid_sap_aut_r01_co_cp1434_pjt8107_EXT1281_0so_blg_op_awa_kt_s00_typewriter1\" target=\"_blank\" rel=\"noopener\">pathogen detection<\/a> through <strong>wastewater testing<\/strong> is centuries old.<\/p>\n<h3>Monitoring the Complexities of the Human Microbiome<\/h3>\n<p>What makes wastewater pathogen detection so valuable is the incredible quantity of\u00a0microbes that live within our digestive tracts. These microbes, comprising the <a href=\"https:\/\/bit.ly\/3lgOS2R\" target=\"_blank\" rel=\"noopener\">gut\u00a0microbiome<\/a>, play an incredible (though poorly understood) role in overall human health, for\u00a0everything from digestion to <a href=\"https:\/\/bit.ly\/3BdaliD\" target=\"_blank\" rel=\"noopener\">cardiac health<\/a> to the immune system.<sup>3,4<\/sup> Viruses, bacteria, fungi,\u00a0and other microbes form a complex system within the gut, competing with invading\u00a0pathogens for attachment sites and nutrients, aiding in carbohydrate digestion, producing\u00a0vitamins, and more. Many biological functions that need to be executed for us to survive are\u00a0carried out by the <a href=\"https:\/\/www.thermofisher.com\/blog\/behindthebench\/the-human-microbiome-new-frontiers-in-medical-research\/?icid=bid_sap_aut_r01_co_cp1434_pjt8107_EXT1281_0so_blg_op_awa_kt_s00_typewriter2\" target=\"_blank\" rel=\"noopener\">human microbiome<\/a>. We can find evidence of the organisms contained\u00a0within it in the fecal matter we eliminate and draw conclusions about the health of the\u00a0subject or community from where it came. While the concept of getting this waste far away\u00a0from where we live may be as old as human settlement, the idea to utilize that same waste\u00a0to monitor health and disease on both the individual and community level is a much more\u00a0recent development, dating back to the 19th century.<\/p>\n<p><iframe loading=\"lazy\" title=\"Mapping the Journey of Dr. Christopher Mason through the world of Microbiome\" width=\"760\" height=\"428\" src=\"https:\/\/www.youtube.com\/embed\/hbAPvkstcXU?feature=oembed\" frameborder=\"0\" allow=\"accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture\" allowfullscreen><\/iframe><\/p>\n<h3>Wastewater Surveillance Through the Centuries: A Timeline<\/h3>\n<p>The first waterborne disease to be scientifically documented was the <a href=\"https:\/\/academic.oup.com\/ije\/article\/12\/4\/393\/685217?login=true\" target=\"_blank\" rel=\"noopener\">Broad Street <\/a>cholera\u00a0outbreak of 1854 in London.<sup>5<\/sup> Impressively, <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/15559385\/\" target=\"_blank\" rel=\"noopener\">Dr. John Snow<\/a> (the father of epidemiology, not\u00a0of Winterfell) was able to convince local officials of the disease\u2019s source and vehicle of\u00a0transmission decades before germ theory had been proven.<sup>6<\/sup> Snow managed this feat by\u00a0comparing the water sources of disease-stricken and untouched households and tracked the\u00a0outbreak to a single pump on Broad Street. Ever since, epidemiologists have looked to\u00a0water for answers about how diseases are spread, and how they might be tracked without\u00a0relying on large-scale individualized testing.<\/p>\n<p>In the 1940s, epidemiologists utilized wastewater to track and contain disease outbreaks in\u00a0the United States, <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/8561468\/\" target=\"_blank\" rel=\"noopener\">particularly polio<\/a>.<sup>7<\/sup> The cell culture methods used were crude by today\u2019s\u00a0standards, but effective nonetheless, and wastewater surveillance remains a critical tool for\u00a0eradicating polio across the globe.<sup>8<\/sup> Still, many pathogens are either difficult or impossible to\u00a0culture, and more efficient and cost-effective methods have been developed, like\u00a0hybridization with\u00a0 radioactive cDNA probes to <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/2447830\/\" target=\"_blank\" rel=\"noopener\">monitor Hepatitis A<\/a> in the 1980s.<sup>9<\/sup> It wasn\u2019t\u00a0until the 1990s, however, that the gold standard of <a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0043135499000718\" target=\"_blank\" rel=\"noopener\">wastewater pathogen detection<\/a>\u00a0techniques was brought to the front lines with PCR.<sup>10,11<\/sup><\/p>\n<p>Because PCR can be quick and efficient,<a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/25172863\/\" target=\"_blank\" rel=\"noopener\">\u00a0detection of pathogens in wastewater<\/a> can\u00a0be done even before those infected start to show symptoms.12 Recently, innovative and highthroughput\u00a0PCR-based workflows have been used for ongoing monitoring of the COVID-19\u00a0pandemic. As nasal swab testing was limited and often delayed in the early stages of the\u00a0global spread of SARS-CoV-2, <a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/life-science\/dna-rna-purification-analysis\/automated-purification-extraction\/automated-magmax-kits-nucleic-acid-extraction\/magmax-microbiome-extraction-kits\/wastewater-surveillance.html?icid=bid_sap_aut_r01_co_cp1434_pjt8107_EXT1281_0so_blg_op_awa_kt_s00_typewriter7\" target=\"_blank\" rel=\"noopener\">wastewater testing <\/a>was suggested as a way to bypass some\u00a0of the bottlenecks in our testing infrastructure and identify areas where outbreaks were just\u00a0starting, long before case numbers, hospitalizations, and deaths took off. Some universities\u00a0used this strategy to identify which dormitories required individual testing. <a href=\"https:\/\/doi.org\/10.1101\/2021.06.18.21259162\" target=\"_blank\" rel=\"noopener\">A recent study<\/a>\u00a0from a university may be good resource to add to this list (They used the KingFisher Flex\u00a0platform). Here is the<a href=\"https:\/\/scitechdaily.com\/85-of-campus-covid-19-cases-detected-early-by-uc-san-diegos-wastewater-screening\/\" target=\"_blank\" rel=\"noopener\"> link<\/a> to the preprint.\u00a0Rapid, large-scale wastewater surveillance and automated reporting system enabled early\u00a0detection of nearly 85% of COVID-19 cases on a University campus.<\/p>\n<h3><strong>Modernizing the Approach to Wastewater Surveillance<\/strong><\/h3>\n<p>While wastewater detection shows immense promise, both for the current pandemic and beyond, a detection method is only as effective as the quality of extracted proteins or nucleic acids (DNA or RNA) allows it to be. Our <a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/life-science\/dna-rna-purification-analysis\/automated-purification-extraction\/automated-magmax-kits-nucleic-acid-extraction\/magmax-microbiome-extraction-kits.html?icid=bid_sap_aut_r01_co_cp1434_pjt8107_EXT1281_0so_blg_op_awa_kt_s00_typewriter3\" target=\"_blank\" rel=\"noopener\">MagMAX Microbiome Ultra Nucleic Acid Extraction Kits<\/a> can help with the challenging sample types required for microbiome detection and <a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/life-science\/dna-rna-purification-analysis\/automated-purification-extraction\/automated-magmax-kits-nucleic-acid-extraction\/magmax-microbiome-extraction-kits\/wastewaterresources\"><strong>wastewater testing<\/strong><\/a>. And there\u2019s a bonus: The kit is automation-ready, allowing higher throughput with Thermo Fisher\u2019s\u00a0<a href=\"https:\/\/bit.ly\/3uFfMnS\" target=\"_blank\" rel=\"noopener\">KingFisher Flex sample purification system<\/a>. Automated protocols require less hands-on time and enable faster workflows. Together, these products empower research and clinical laboratories to work smarter, not harder, and streamline processes to allow for high-throughput DNA\/RNA extraction, suitable for many downstream applications.<\/p>\n<div style=\"width: 366px\" class=\"wp-caption alignright\"><img loading=\"lazy\" decoding=\"async\" class=\"alignright\" style=\"float: right;margin: 5px\" title=\"Testing solutions with KingFisher and Dynabeads automated workflows \" src=\"https:\/\/www.thermofisher.com\/blog\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2021\/10\/pg2350-pjt7696-col115348-kf-migration-display-banners-global-a-social-3-1080x1080-1.jpg\" width=\"356\" height=\"356\" \/><p class=\"wp-caption-text\">KingFisher system-optimized kits, reagents, and protocols that can be used to maximize purity and yield for each extraction target and sample type. MagMAX kits are best suited for automated extraction of DNA or RNA due to their ease of use and reliability.<\/p><\/div>\n<p>We should probably continue our practice of eliminating our waste from the places we live,\u00a0but that doesn\u2019t mean we have to flush the countless opportunities to improve our health by\u00a0leveraging the vast information contained in such\u00a0 undesirable substances and sample types.\u00a0From studying how disruptions of microbiota contribute to cancer to stopping the next global\u00a0pandemic in its tracks, the answer could be in what we put in our toilets. And our KingFisher<br \/>\nand MagMAX systems can help your lab get the most out of every unmentionable bit.<\/p>\n<p>If you\u2019re interested in learning more about our automated extraction and purification\u00a0systems for pathogen detection or other uses, contact us to set up a demonstration of the\u00a0<a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/global\/forms\/kingfisher-magnetic-particle-processors-tools.html?icid=bid_sap_aut_r01_co_cp1434_pjt8107_EXT1281_0so_blg_op_awa_kt_s00_typewriter5\" target=\"_blank\" rel=\"noopener\">KingFisher Microbiome Kit<\/a> or read about our other <a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/life-science\/dna-rna-purification-analysis\/automated-purification-extraction.html?icid=bid_sap_aut_r01_co_cp1434_pjt8107_EXT1281_0so_blg_op_awa_kt_s00_typewriter6\" target=\"_blank\" rel=\"noopener\">automated solutions in sample\u00a0preparation and extraction<\/a>.<\/p>\n<p><em>This article is for Research Use Only. Not for use in diagnostic procedures.<\/em><\/p>\n<p><em>________________________________________________________________________________________________________________________<\/em><\/p>\n<p><strong>References for Wastewater Testing and Surveillance<\/strong><br \/>\n1. Lofrano G, Brown J. Wastewater management through the ages: a history of mankind.\u00a0Sci Total Environ. 2010;408(22):5254-5264.<br \/>\n2. Wastewater Treatment System. NYC Environmental Protection website:\u00a0https:\/\/www1.nyc.gov\/site\/dep\/water\/wastewater-treatment-system.page. Accessed June\u00a028, 2021.<br \/>\n3. C\u00e9nit MC, Matzaraki V, Tigchelaar EF, Zhernakova A. Rapidly expanding knowledge on\u00a0the role of the gut microbiome in health and disease. Biochim Biophys Acta.\u00a02014;1842(10):1981-1992.<br \/>\n4. Kordalewska M, Markuszewski MJ. Metabolomics in cardiovascular diseases. J Pharm\u00a0Biomed Anal. 2015 Sep 10;113:121-36.<br \/>\n5. Cameron D, Jones IG. John Snow, the broad street pump and modern epidemiology. Int\u00a0J Epidemiol. 1983;12(4):393-396.<br \/>\n6. Buechner JS, Constantine H, Gjelsvik A. John Snow and the Broad Street pump: 150\u00a0years of epidemiology. Med Health R I. 2004;87(10):314-315.<br \/>\n7. Metcalf TG, Melnick JL, Estes MK. Environmental virology: from detection of virus in\u00a0sewage and water by isolation to identification by molecular biology&#8211;a trip of over 50\u00a0years. Annu Rev Microbiol. 1995;49:461-487.<br \/>\n8. Brouwer AF, Eisenberg JNS, Pomeroy CD, et al. Epidemiology of the silent polio\u00a0outbreak in Rahat, Israel, based on modeling of environmental surveillance data. Proc\u00a0Natl Acad Sci U S A. 2018;115(45):E10625-E10633.<br \/>\n9. Jiang X, Estes MK, Metcalf TG. Detection of hepatitis A virus by hybridization with singlestranded\u00a0RNA probes. Appl Environ Microbiol. 1987;53(10):2487-2495.<br \/>\n10. Toze S. PCR and the detection of microbial pathogens in water and wastewater. Water\u00a0Res. 1999;33(17):3545-3556.<br \/>\n11. Erlich HA, Gelfand D, Sninsky JJ. Recent advances in the polymerase chain reaction.\u00a0Science. 1991;252(5013):1643-1651.<br \/>\n12. Hellm\u00e9r M, Pax\u00e9us N, Magnius L, et al. Detection of pathogenic viruses in sewage\u00a0provided early warnings of hepatitis A virus and norovirus outbreaks. Appl Environ\u00a0Microbiol. 2014;80(21):6771-6781.<br \/>\n13. More And More Colleges Testing Student Poop For Coronavirus : NPR website:https:\/\/www.npr.org\/2020\/10\/26\/925831847\/colleges-turn-to-wastewater-testing-in-aneffort-to-flush-out-the-coronavirus. Published October 26, 2020. Accessed June 28th,2021<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Since humans started building permanent structures in which to live, even as far back as the\u00a0Babylonians around 4,000 B.C., we have sought to get our waste as far away from ourselves\u00a0as possible.1 That effort has continued to the\u00a0 modern-day, where the sewers under our feet\u00a0carry billions of gallons of waste (every day!) away from our<\/p>\n","protected":false},"author":537,"featured_media":1280,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"_kad_blocks_custom_css":"","_kad_blocks_head_custom_js":"","_kad_blocks_body_custom_js":"","_kad_blocks_footer_custom_js":"","_monsterinsights_skip_tracking":false,"_genesis_hide_title":false,"_genesis_hide_breadcrumbs":false,"_genesis_hide_singular_image":false,"_genesis_hide_footer_widgets":false,"_genesis_custom_body_class":"","_genesis_custom_post_class":"","_genesis_layout":"","_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[37,25],"tags":[],"division":[],"class_list":{"0":"post-1272","1":"post","2":"type-post","3":"status-publish","4":"format-standard","5":"has-post-thumbnail","7":"category-industry-insights","8":"category-water-analysis","9":"entry"},"_selected_authors":"","_selected_reviewers":"","acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO Premium plugin v27.8 (Yoast SEO v27.8) - https:\/\/yoast.com\/product\/yoast-seo-premium-wordpress\/ -->\n<title>A Brief History of Wastewater Testing and Pathogen Detection<\/title>\n<meta name=\"description\" content=\"Wastewater testing has been used for monitoring infectious diseases for centuries. 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This application note explores the optimization of the Thermo Scientific DynaSpin Single-Use Centrifuge for cell\u2026","rel":"","context":"In &quot;Bioprocessing&quot;","block_context":{"text":"Bioprocessing","link":"https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/bioprocessing\/"},"img":{"alt_text":"Single-Use Centrifuge for mAb Production & Clarification","src":"https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/Screenshot-2026-04-17-173010.png?resize=350%2C200&ssl=1","width":350,"height":200,"srcset":"https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/Screenshot-2026-04-17-173010.png?resize=350%2C200&ssl=1 1x, https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/Screenshot-2026-04-17-173010.png?resize=525%2C300&ssl=1 1.5x, https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/Screenshot-2026-04-17-173010.png?resize=700%2C400&ssl=1 2x"},"classes":[]},{"id":6325,"url":"https:\/\/www.thermofisher.com\/blog\/life-in-the-lab\/bioprocessing-single-use-equipment-harvest-clarification-solutions\/","url_meta":{"origin":1272,"position":4},"title":"Advance harvest and clarification with integrated, single-use solutions","author":"Naveen Pichuka","date":"May 5, 2026","format":false,"excerpt":"Summary In modern bioprocessing, harvest and clarification remain critical and increasingly complex steps for biopharmaceutical manufacturers. As cell densities rise and processes intensify, traditional workflows can struggle with efficiency, scalability, and cost. Biopharma teams need solutions that simplify operations, reduce bottlenecks, and support consistent performance from development through commercial manufacturing.\u2026","rel":"","context":"In &quot;Bioprocessing&quot;","block_context":{"text":"Bioprocessing","link":"https:\/\/admin.acceleratingscience.com\/life-in-the-lab\/bioprocessing\/"},"img":{"alt_text":"DynaSpin + Harvest RC app note","src":"https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/dynaspin-harvest.png?resize=350%2C200&ssl=1","width":350,"height":200,"srcset":"https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/dynaspin-harvest.png?resize=350%2C200&ssl=1 1x, https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/dynaspin-harvest.png?resize=525%2C300&ssl=1 1.5x, https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/dynaspin-harvest.png?resize=700%2C400&ssl=1 2x, https:\/\/i0.wp.com\/admin.acceleratingscience.com\/life-in-the-lab\/wp-content\/uploads\/sites\/10\/2026\/04\/dynaspin-harvest.png?resize=1050%2C600&ssl=1 3x"},"classes":[]},{"id":5052,"url":"https:\/\/www.thermofisher.com\/blog\/life-in-the-lab\/the-essential-guide-to-phenol-red-in-cell-culture-media\/","url_meta":{"origin":1272,"position":5},"title":"The Essential Guide to Phenol Red in Cell Culture Media","author":"Life in the Lab Staff","date":"October 27, 2025","format":false,"excerpt":"Phenol red is commonly found in many cell culture media formulations, offering a convenient way for researchers to monitor cell health. It enables a quick and easy visual indicator of culture conditions.\u00a0However, it is important to be aware of its potential interactions in certain experimental setups. 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