{"id":12913,"date":"2019-11-14T22:25:00","date_gmt":"2019-11-15T04:25:00","guid":{"rendered":"https:\/\/admin.acceleratingscience.com\/materials\/?p=12913"},"modified":"2026-04-03T13:19:39","modified_gmt":"2026-04-03T18:19:39","slug":"how-scanning-electron-microscopy-works-sem-explainer","status":"publish","type":"post","link":"https:\/\/www.thermofisher.com\/blog\/materials\/how-scanning-electron-microscopy-works-sem-explainer\/","title":{"rendered":"How Scanning Electron Microscopy Works"},"content":{"rendered":"<h2 style=\"font-size: 100%\"><strong>What are scanning electron microscopes?<\/strong><\/h2>\n\n\n<p><a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/electron-microscopy\/products\/scanning-electron-microscopes.html\" target=\"_blank\" rel=\"noreferrer noopener\">Scanning electron microscopes<\/a> (SEMs) have become powerful and versatile tools for material characterization, especially in recent years, as the size of materials used in various applications continues to shrink. This blog explores how scanning electron microscopy works, and the information that this valuable technique can provide.<\/p>\n\n\n\n<p>Electron microscopes use electrons for imaging in a similar way that light microscopes use visible light. Unlike transmission electron microscopes (TEMs), which detect electrons that pass through a very thin specimen, SEMs use the electrons that are reflected or knocked off the near-surface region of a sample to create an image. Since the wavelength of electrons is much smaller than that of light, the resolution of SEMs is superior to that of a light microscope.<\/p>\n\n\n<h2 style=\"font-size: 100%\"><strong>How does scanning electron microscopy work?<\/strong><\/h2>\n\n\n<p>In scanning electron&nbsp;microscopy, the <a href=\"https:\/\/www.thermofisher.com\/blog\/materials\/electron-source-fundamentals\/\" target=\"_blank\" rel=\"noreferrer noopener\">electron beam<\/a> scans the sample in a raster pattern. First, electrons&nbsp;are generated&nbsp;at the top of the column by the&nbsp;<strong>electron source<\/strong>. These are&nbsp;emitted when their thermal energy overcomes the work function of the source material. They are&nbsp;then&nbsp;accelerated and attracted by the&nbsp;positively-charged&nbsp;<strong>anode<\/strong>.<\/p>\n\n\n<div id=\"attachment_12918\" style=\"width: 597px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-12918\" class=\" wp-image-12918\" src=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/anatomy-scanning-electron-micrscope-1.png\" alt=\"Basic components of a scanning electron microscope\" title=\"Basic components of a scanning electron microscope\" width=\"587\" height=\"490\" srcset=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/anatomy-scanning-electron-micrscope-1.png 480w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/anatomy-scanning-electron-micrscope-1-300x251.png 300w\" sizes=\"auto, (max-width: 587px) 100vw, 587px\" \/><p id=\"caption-attachment-12918\" class=\"wp-caption-text\">Electrons originate from the electron source before being controlled by an anode, condenser lens, scan coils, and objective lens. The electrons then interact with the sample and are collected and interpreted by a secondary electron detector.<\/p><\/div>\n\n\n<p>The entire electron column needs to be under vacuum. Like all components of an electron microscope, the electron source is sealed inside a special chamber to preserve vacuum and protect it against contamination, vibrations, and noise. In addition to protecting the electron source from being contaminated, vacuum also allows the user to acquire a high-resolution image. In the absence of a vacuum, other atoms and molecules can be present in the column, which would interact with and deflect electrons, reducing the image quality. High vacuum also helps the detectors in the column collect electrons more efficiently.<\/p>\n\n\n<h2 style=\"font-size: 100%\"><strong>SEM instrument components and principles explained<\/strong><\/h2>\n\n\n<p>Similar to optical microscopes, electron microscopes use lenses to control the path of the electrons. However, they use electromagnetic lenses because electrons cannot pass through glass. These lenses consist of coils of wire inside metal pole pieces. When current passes through the coils, a magnetic field is generated. As electrons are very sensitive to magnetic fields, their path inside the microscope column can be controlled by these electromagnetic lenses simply by adjusting the current that is applied to them.<\/p>\n\n\n\n<p>Generally, two types of electromagnetic lenses are used: a condenser lens and an objective lens. The condenser lens converges the electron beam, which opens again and is converged once more by the objective lens before hitting the sample. The condenser lens defines the size of the electron beam (which defines the resolution), while the objective lens focuses the beam onto the sample.<\/p>\n\n\n\n<p>The SEM\u2019s lens system also contains scanning coils, which are used to raster the beam onto the sample. In many cases, apertures are combined with the lenses to control the size of the beam.<\/p>\n\n\n<h2 id=\"h-secondary-vs-backscattered-electron-detection-in-sem\" class=\"wp-block-heading\" style=\"font-size: 100%\"><strong>Secondary vs backscattered electron detection in SEM<\/strong><\/h2>\n\n\n<p>The interaction of electrons within a sample can generate many different types of electrons, photons, or irradiations. In the case of an SEM, the two types of electrons used for imaging are <a href=\"https:\/\/www.thermofisher.com\/blog\/materials\/backscattered-electrons-in-sem-imaging\/\" target=\"_blank\" rel=\"noreferrer noopener\">backscattered<\/a> (BSE) and secondary electrons (SE).<\/p>\n\n\n\n<p>BSEs belong to the primary electron beam and are reflected after elastic interactions between the beam and the sample. In contrast, secondary electrons originate from the atoms of the sample. They are a result of inelastic interactions between the electron beam and the sample.<\/p>\n\n\n<div id=\"attachment_12915\" style=\"width: 540px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-12915\" class=\" wp-image-12915\" src=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/electrons-sem.png\" alt=\"Different types of signals used by scanning electron microscopy and the area from which they originate.\" title=\"Different types of signals used by scanning electron microscopy and the area from which they originate.\" width=\"530\" height=\"538\" srcset=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/electrons-sem.png 414w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/electrons-sem-296x300.png 296w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/electrons-sem-80x80.png 80w\" sizes=\"auto, (max-width: 530px) 100vw, 530px\" \/><p id=\"caption-attachment-12915\" class=\"wp-caption-text\">Secondary electrons come from the surface of a sample, backscattered electrons penetrate into the sample, and X-rays come from farther into the sample.<\/p><\/div>\n\n\n<p>Because BSEs come from deeper regions of the sample whereas SEs originate from surface regions, the two carry different types of information. BSE images show high sensitivity to differences&nbsp;in&nbsp;atomic number; the higher the atomic number, the&nbsp;brighter&nbsp;the material appears in the image. SE imaging can provide&nbsp;more detailed surface information.<\/p>\n\n\n<div id=\"attachment_12916\" style=\"width: 646px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-12916\" class=\"size-full wp-image-12916\" src=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/bse-se-sem.png\" alt=\"Scanning electron microscopy BSE (left) and SE (right) images of FeO2  particles.\" title=\"Scanning electron microscopy BSE (left) and SE (right) images of FeO2  particles.\" width=\"636\" height=\"337\" srcset=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/bse-se-sem.png 636w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/bse-se-sem-300x159.png 300w\" sizes=\"auto, (max-width: 636px) 100vw, 636px\" \/><p id=\"caption-attachment-12916\" class=\"wp-caption-text\">In the BSE image, elements with a higher atomic number are brighter. The SE image provides a clearer view of surface topography.<\/p><\/div>\n\n\n<p>In many microscopes, detection of X-rays generated from the electron-matter interaction is&nbsp;also widely used to perform elemental analysis of the sample. Every material produces X-rays&nbsp;that&nbsp;have a specific energy; X-rays are the material\u2019s fingerprint. By detecting the energies of X-rays that come out of a sample with an unknown composition,&nbsp;it\u2019s possible to&nbsp;identify all the different elements that&nbsp;the sample contains.<\/p>\n\n\n<h2 id=\"h-how-are-electrons-detected-in-scanning-electron-microscopy\" class=\"wp-block-heading\" style=\"font-size: 100%\"><strong>How are electrons detected in scanning electron microscopy?<\/strong><\/h2>\n\n\n<p>BSEs and SEs&nbsp;are detected by different types of detectors. For the detection of BSEs, solid state detectors are placed above the sample, concentrically to the electron beam, to maximize BSE collection.<\/p>\n\n\n\n<p>For the detection of SEs, the<strong>&nbsp;Everhart-Thornley detector<\/strong>&nbsp;is mainly used. It consists of a scintillator inside a Faraday cage,&nbsp;which is positively charged and attracts the SEs. The scintillator&nbsp;is then&nbsp;used to accelerate the electrons and convert them into light before reaching a photomultiplier for amplification. The SE detector is placed at an angle at the side of the electron to increase the efficiency&nbsp;of detecting SEs, which are then used to form a 3D-image of the sample shown on a PC monitor.<\/p>\n\n\n\n<p>As you can see, there are different processes that the electrons must go through before an image can be shown on your monitor. Of course, you don\u2019t have to wait for the electrons to finish their journey; the whole process is almost instantaneous, in the range of nanoseconds. At the same time, every \u201cstep\u201d of an electron inside the column needs to be&nbsp;pre-calculated and controlled with precision&nbsp;in order to obtain a high-quality image.<\/p>\n\n\n<div id=\"attachment_12917\" style=\"width: 1111px\" class=\"wp-caption aligncenter\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-12917\" class=\"size-full wp-image-12917\" title=\"SEM backscattered electron image of tungsten particles\" src=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/tungsten.jpg\" alt=\"SEM backscattered electron image of tungsten particles\" width=\"1101\" height=\"601\" srcset=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/tungsten.jpg 1101w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/tungsten-300x164.jpg 300w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/tungsten-1024x559.jpg 1024w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2022\/04\/tungsten-768x419.jpg 768w\" sizes=\"auto, (max-width: 1101px) 100vw, 1101px\" \/><p id=\"caption-attachment-12917\" class=\"wp-caption-text\">The image on the left shows a wider view, while the image on the right provides a more detailed look.<\/p><\/div>\n\n\n<p>The technology behind scanning electron microscopes is continually being improved, and new applications are still arising, making&nbsp;SEMs fascinating instruments&nbsp;with lots of undiscovered capabilities.<\/p>\n\n\n\n<p>To learn more about the best SEM for your research needs, <a href=\"https:\/\/www.thermofisher.com\/us\/en\/home\/global\/forms\/industrial\/materials-science-form.html\" target=\"_blank\" rel=\"noreferrer noopener\">speak with an expert.<\/a><\/p>\n\n\nIf you\u2019d like to learn more electron microscopy basics, explore some of our other blogs in the Microscopy 101 series, including:<br>\n&#8211; <a href=\"https:\/\/www.thermofisher.com\/blog\/materials\/what-is-scanning-electron-microscopy\/\">What is Scanning Electron Microscopy?<\/a><br>\n&#8211; <a href=\"https:\/\/www.thermofisher.com\/blog\/atomic-resolution\/seeing-with-electrons-the-anatomy-of-an-electron-microscope\/?cid=msd_xbu_xbu_xmkt_xbl_1901117_gl_oso_blg_sfmoo2&amp;utm_source=comms-blog&amp;utm_medium=blog&amp;utm_campaign=msd_xbu_xbu_xmkt_xbl_1901117_gl_oso_blg_sfmoo2\">The Anatomy of an Electron Microscope<\/a><br>\n&#8211; <a href=\"https:\/\/www.thermofisher.com\/blog\/materials\/electron-source-fundamentals\/?cid=msd_xbu_xbu_xmkt_xbl_1901117_gl_oso_blg_sfmoo2&amp;utm_source=comms-blog&amp;utm_medium=blog&amp;utm_campaign=msd_xbu_xbu_xmkt_xbl_1901117_gl_oso_blg_sfmoo2\">How Do You Make an Electron Beam? \u2013 Electron Source Fundamentals<\/a><br>\n&#8211; <a href=\"https:\/\/www.thermofisher.com\/blog\/materials\/tem-vs-sem-whats-the-difference\/?cid=msd_xbu_xbu_xmkt_xbl_1901117_gl_oso_blg_sfmoo2&amp;utm_source=comms-blog&amp;utm_medium=blog&amp;utm_campaign=msd_xbu_xbu_xmkt_xbl_1901117_gl_oso_blg_sfmoo2\">TEM vs SEM: What\u2019s the Difference?<\/a><br><br>\n\n\n<figure class=\"wp-block-image aligncenter is-resized\"><a href=\"https:\/\/ter.li\/w1vn6t\"><img loading=\"lazy\" decoding=\"async\" width=\"779\" height=\"134\" src=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2019\/11\/Join-the-conversation-banner-in-blogs-social-graphic-1143250-779x134-2.png\" alt=\"Materials science electron microscopy newsletter banner\" class=\"wp-image-13483\" style=\"width:831px;height:auto\" srcset=\"https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2019\/11\/Join-the-conversation-banner-in-blogs-social-graphic-1143250-779x134-2.png 779w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2019\/11\/Join-the-conversation-banner-in-blogs-social-graphic-1143250-779x134-2-300x52.png 300w, https:\/\/admin.acceleratingscience.com\/materials\/wp-content\/uploads\/sites\/7\/2019\/11\/Join-the-conversation-banner-in-blogs-social-graphic-1143250-779x134-2-768x132.png 768w\" sizes=\"auto, (max-width: 779px) 100vw, 779px\" \/><\/a><\/figure>\n\n\n\n<p><em>Antonis Nanakoudis is an application and product development specialist for the Phenom Desktop SEM family of products at Thermo Fisher Scientific.<\/em>&nbsp;<\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>What are scanning electron microscopes? Scanning electron microscopes (SEMs) have become powerful and versatile tools for material characterization, especially in recent years, as the size of materials used in various applications continues to shrink. This blog explores how scanning electron microscopy works, and the information that this valuable technique can provide. Electron microscopes use electrons<\/p>\n","protected":false},"author":1120,"featured_media":12918,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"_kad_blocks_custom_css":"","_kad_blocks_head_custom_js":"","_kad_blocks_body_custom_js":"","_kad_blocks_footer_custom_js":"","_monsterinsights_skip_tracking":false,"_genesis_hide_title":false,"_genesis_hide_breadcrumbs":false,"_genesis_hide_singular_image":false,"_genesis_hide_footer_widgets":false,"_genesis_custom_body_class":"","_genesis_custom_post_class":"","_genesis_layout":"","footnotes":""},"categories":[984,963,1283,1277],"tags":[],"division":[],"class_list":{"0":"post-12913","1":"post","2":"type-post","3":"status-publish","4":"format-standard","5":"has-post-thumbnail","7":"category-electron-microscopy-101","8":"category-scanning-electron-microscopy","9":"category-what-is-a-scanning-electron-microscope","10":"category-what-is-scanning-electron-microscopy","11":"entry"},"_selected_authors":[],"_selected_reviewers":[],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO Premium plugin v27.8 (Yoast SEO v27.8) - https:\/\/yoast.com\/product\/yoast-seo-premium-wordpress\/ -->\n<title>How Scanning Electron Microscopy Works - SEM - Advancing Materials<\/title>\n<meta name=\"description\" content=\"Learn how scanning electron microscopy works; 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