Methyl Primer Express® Software v1.0

Catalog number: 4376041

Applied Biosystems™  Related applications: Epigenetic Sequencing | Methylation Analysis | Sanger Sequencing

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Description

Methyl Primer Express® Software v1.0 enables you to design high quality PCR primers for methylation mapping experiments. Simply cut and paste in your region of interest. The tool searches for CpG islands and simulates bisulfite modification of DNA in silico.

Methyl Primer Express® Software v1.0 enables you to:

• Easily design robust primers for methylation studies
• Annotate the transcription start base and translation start codon
• Highlight target regions of interest and examine these boundaries in your primer design reports
• Predict CpG islands in your DNA sequence
• Simulate the bisulfite modification of DNA
• Create a “reference" sequence for downstream sequencing analysis

Modify CpG Search and Primer Design Criteria Easily
Flexible software enables you to easily modify the criteria you use to search for CpG islands in your sample DNA.

Create Information-Rich Reports
Create primer design reports containing your sample's initial DNA sequence, its bisulfite-modified sequence, a CpG density representation, the location of primers in the initial sequence, and both the primer sequence and its associated characteristics.

Part of a Complete Methylation Experiment Workflow
Applied Biosystems® supplies all the tools you need for DNA methylation mapping experiments (see Figure 1 for details).

How to Order
Simply add Methyl Primer Express® Software v1.0 to your cart and check out normally to receive a CD-ROM and printed Quick Reference Guide. Or download the software for free using the link below:

Download Methyl Primer Express® Software v1.0

For Research Use Only. Not for use in diagnostics procedures.

Specifications

For Use With (Equipment): 3730 DNA Analyzer, 3500 Genetic Analyzer, 310 Genetic Analyzer
Software Type: Primer Design, Epigenetics
Data Input: Genomic DNA sequence data
Data Output: Bisulfite Sequencing Primer (BSP) Reports, CpG Site Reports
License Type: Static
Product Size: 1 software
Operating System: Windows 2000 (Service Pack 4), Windows XP (Service Pack 2)
Software Category: Software
System Requirements: Computer: Core 2 Duo E8400/3 GHz; 2 GB RAM

Contents & storage

Contains one software CD and quick reference guide.

Documents

Manuals & protocols