Ion Torrent™

Ion AmpliSeq™ Sample ID Panel

Catalog number: 4479790
Ion Torrent™

Ion AmpliSeq™ Sample ID Panel

Catalog number: 4479790
Catalog Number
4479790
Unit Size
96 reactions
Price (EUR)
Availability
-
Quantity
Catalog NumberUnit SizePrice (EUR)AvailabilityQuantity
447979096 reactions
-
Product Overview
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The Ion AmpliSeq Sample ID Panel is a versatile, cost effective, and easy-to-use human SNP genotyping panel comprising 9 specially designed primer pairs that can be added to the multiplex PCR reaction to generate a unique ID during post-sequencing analysis of research samples.

Designed to advance clinical research, the Ion AmpliSeq Sample ID Panel helps reveal sample misidentification for increased confidence during data analysis and reporting. The Ion AmpliSeq Sample ID Panel can be used in conjunction with any Ion AmpliSeq ready-to-use panel or custom panel designed via the Ion AmpliSeq Designer (www.ampliseq.com).

Verify various sample combinations:
• Tumor/normal paired samples
• Samples from the same individual in longitudinal studies
• Multi-tissue or multi-tumor samples from the same individual

Sample identification through SNP genetyping
• Panel includes nine primer pairs targeting nine (female samples) or ten (male samples) validated SNPs
• SNPs are unlinked and exhibit exceptional robustness and consistently high minor allele frequency across a diverse group of human populations
• One primer pair targets the amelogenin gene and amplifies one target on X chromosome and a distinct target on Y chromosome, allowing simple and quick sample gender determination
• First letter of Sample ID code provides instant gender determination for sample
• Optimal discrimination power (∼1:5,000*) with minimal sequencing needed

Simple workflow—just one pipetting step
• Spike 1 μL of the 20X Sample ID primer pool directly into any Ion AmpliSeq primer pool for co-amplification and downstream sequencing and data analysis
• Enabled for use with any Ion Xpress barcode
• Compatible with the Ion Reporter Software, a cloud-hosted software tool for automated variant analysis

Includes:
20X Ion AmpliSeq Sample ID Primer Pool

Required:
• Torrent Suite Software (v3.0 or greater) that includes the Ion AmpliSeq Sample ID Panel plug-in
• Ion AmpliSeq Library Kit 2.0 User Guide
• Ion AmpliSeq ready-to-use panel or custom panel designed via the Ion AmpliSeq Designer (www.ampliseq.com)

1Pakstis AJ et al. SNPs for a Universal Individual Identification Panel. Hum Genet. 2010 Mar; 127(3):315-24.
*4641 discrimination power calculations assumes no missing genotyping data

For Research Use Only. Not for use in diagnostic procedures.

Specifications

Sample Type
DNA
Sequencing Type
Genome and DNA Sequencing
For Use With (Equipment)
Ion PGM™ System, Ion Proton™ System, Ion GeneStudio™ S5 System
For Use With (Application)
Sequencing
Libraries
Targeted Sequencing Library
Multiplex Capability
9 amplicons
No. of Reactions
96
Primer
Sample ID Primers
Product Line
Ion AmpliSeq™
Product Type
Sample ID Panel
Shipping Condition
Approved for shipment at Room Temperature or on Dry Ice
Species
Human
Technique
Amplicon Sequencing
Workflow Step
Sample QC
Starting Material Amount
10 ng gDNA

Contents & Storage

1 tube 20X Ion AmpliSeq™ Sample ID Primer Pool
Store at -30 °C to -10 °C

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