Ion Torrent™

Ridom™ SeqSphere+ Software for Ion Torrent™ Systems (Commercial)

Catalog number: 4483698
Ion Torrent™

Ridom™ SeqSphere+ Software for Ion Torrent™ Systems (Commercial)

Catalog number: 4483698
Catalog Number
4483698
Unit Size
3 years-5 users
Price (USD)
Price: 21,530.00
Your price:
Availability
-
Quantity
Catalog Number
Unit Size
1 year, 2 users
Price (USD)
Price: 4,960.00
Your price:
Availability
-
Quantity
Catalog Number
Unit Size
3 years-2 users
Price (USD)
Price: 13,380.00
Your price:
Availability
-
Quantity
Catalog Number
Unit Size
5 years-2 users
Price (USD)
Price: 19,840.00
Your price:
Availability
-
Quantity
Catalog Number
Unit Size
1 year, 5 users
Price (USD)
Price: 7,960.00
Your price:
Availability
-
Quantity
Catalog Number
Unit Size
5 years-5 users
Price (USD)
Price: 31,880.00
Your price:
Availability
-
Quantity
Catalog NumberUnit SizePrice (USD)AvailabilityQuantity
44836983 years-5 users
Price: 21,530.00
Your price:
-
44836921 year, 2 users
Price: 4,960.00
Your price:
-
44836963 years-2 users
Price: 13,380.00
Your price:
-
44837005 years-2 users
Price: 19,840.00
Your price:
-
44836941 year, 5 users
Price: 7,960.00
Your price:
-
44837025 years-5 users
Price: 31,880.00
Your price:
-
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SeqSphere+ Software from Ridom allows for automatic processing and analyzing of microbial sequence data obtained from Ion Torrent™ systems. SeqSphere+ Software enables whole genome microbial typing (MLST+) or traditional MLST sequencing projects. This software is designed both for individual labs and for distributed work-groups (client/server model) to enable easy data sharing. License options are available for 1, 3, or 5 years; 2 or 5 seats; and commercial or academic/government labs.

Ridom SeqSphere+ Software Features:

User-friendly: no scripting skills or bioinformatician needed

Highly automated workflow: download a pre-designed task template or create a custom template, then apply it to the analysis of hundreds of strains with almost no user intervention.

Single, expanding nomenclature service: worldwide, unique nomenclature service that enables a 'Molecular Typing Esperanto'

DNA re-sequencing editor: edit and analyze reference-mapped assemblies of Ion Torrent™ data (e.g., MLST, MLST+) with auto-correction of homopolymer-related insertion/deletion errors.

Sanger data: assemble, edit, and analyze Sanger CE sequencing data (e.g., MLST).

Analytical tools: select data entries from a comparison table for epidemiologic, evolutionary, or functional analysis. Cluster and visualize data entries by using minimum spanning or UPGMA/neighbor-joining trees.

Database:
   --Store, search, retrieve, export, and create reports from your epidemiologic and DNA sequence data stored in an integrated database. Search new sequence entries against stored data.
   --Data fields are compliant with the metadata requirements of the NCBI BioSample. Enables data entry plausibility checks.

Bacterial typing: typing of bacteria is automatically performed with user-defined quality parameters (e.g., coverage, stop codons) using public or self-defined query libraries and task templates.

Ridom Community:
   --Rapidly and easily share task templates with other institutions or download them online from the Task Template 'Store'.
   --Option to contribute to a single, worldwide, expanding, publicly-available database of nomenclature and epidemiologic data. Larger (supra) national institutions may obtain their own server for epidemiologic data upon request.

Security:
   --Encryption (SSL) of data in transmission
   --Various configurable user roles, user groups, and access controls
   --Audit trail functionality (who, when and what)

Computer Specifications (Minimum)

Client computer OS: Windows™ 7 64-bit, CPU: Core i5, RAM: 8 GB, HD: 500 GB, Internet connection required to use public Ridom MLST+ Nomenclature Server & Task Template 'Store' (supports working with a private and local nomenclature and to generate custom tasks).

Server computer OS: Windows™ 7/Linux 64-bit (Ubuntu LTS recommended), CPU: Core i5, RAM: 8 GB (48 GB recommended if MIRA de novo assembly done on this server), HD: 2 TB (RAID level 1 or 5 recommended), it is recommended not to use the NGS machine computer as server.
For Research Use Only. Not for use in diagnostic procedures.

Specifications

For Use With (Equipment)
Sequencing Data Analysis
For Use With (Application)
Sequencing
License
Commercial, 5 Seat, 3 Year
Operating System
Ion Personal Genome Machine (PGM™) System
Product Line
Ridom™ SeqSphere+
Product Type
SeqSphere+ Software

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