Arcturus<sup><i>XT</i></sup>&trade; Laser Capture Microdissection Instrument
Thermo Scientific™

ArcturusXT™ Laser Capture Microdissection Instrument

The ARCTURUSXT™ microdissection system is a unique combination of infrared (IR) laser-enabled Laser Capture Microdissection (LCM) and Ultraviolet (UV) LaserRead more
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Catalog NumberQuantity
ARCTURUSXT1 instrument
Catalog number ARCTURUSXT
Price (ZAR)
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Quantity:
1 instrument

The ARCTURUSXT™ microdissection system is a unique combination of infrared (IR) laser-enabled Laser Capture Microdissection (LCM) and Ultraviolet (UV) Laser Cutting in one platform. The open, modular design of the ARCTURUSXT™ system provides unparalleled research flexibility and versatility. Arcturus™ Laser Capture Microdissection instruments, combined with ARCTURUS™ microgenomics reagents, gives you the industry’s only complete solution for microgenomics research.

Key product features:

  • Consolidated design – precise IR laser capture microdissection and UV laser cutting in one single instrument
  • Fast functioning – rapid isolation of specific cells in four simple steps
  • Open, modular platform – flexible to suit numerous research needs
  • Easy, intuitive operation – simplified workflow through streamlined interface
  • Flexible sample prep – wide range of slide types and sample preparations supported

A Unique Offering of Laser Capture and Laser Cutting Microdissection
The solid-state IR laser – exclusive to the ArcturusXT™ microdissection system – delivers a gentle capture technique, which preserves biomolecular integrity and is ideal for single cells or a small number of cells. The solid-state UV laser delivers unprecedented speed and precision, well-suited for microdissecting dense tissue structures and for rapidly capturing large numbers of cells.

Rapidly Isolate Pure Cell Populations for Microgenomic Analysis
Laser capture microdissection allows for rapid isolation of specific cells in four simple steps. After locating the cells of interest, the CapSure™ LCM Cap is placed over the target area. Pulsing the ArcturusXT™ System laser through the cap activates the film on the cap to adhere to the target cells. Lifting the cap removes the target cells now attached to the cap. The isolated cells are now available for extraction of biomolecules. Figure 4 shows examples of cells isolated from samples.

Modular Flexibility to Fit Your Needs
The ArcturusXT™ microdissection instrument is modularized to suit any dynamic research need (see figures). The system utilizes a Nikon Eclipse Ti-E inverted research microscope with a variety of options available at the time of purchase or post-purchase. Each instrument has IR-enabled LCM, an interactive pen-display monitor, and a trackball actuated stage for easy and ergonomic navigation. Additional modules that may be added include LED brightfield illumination or high-intensity halogen illumination, enabling Phase Contrast and Differential Interference Contrast (DIC) microscopy applications. The ArcturusXT™ system may be purchased with or without UV laser cutting and attenuable fluorescence. A wide range of objectives are available, including a 2X-100X dry objective and a 100X oil-immersion objective. For ultimate image quality and analysis, a high-resolution megapixel camera may be added.

Simplified Workflow Through Streamlined User Interface
The simple, intuitive user interface places the focus on research (Figure 2). From loading of samples to extraction of biomolecules, the uncomplicated workflow maximizes experimental efficiency.

Ultimate Flexibility In Sample Source And Preparation
The unique combination of IR laser capture and UV laser cutting permits the use of any slide type from glass, glass membrane, or framed membrane slides for contact or non-contact microdissection.

In addition, a variety of specimen preparation may be used (refer to figures). Examples include:

  • thin or thick sections
  • frozen or formalin-fixed tissues
  • chromogenic stained, fluorescently stained, or unstained sections
  • hydrated or dehydrated specimens
  • fine needle aspirates
  • forensic smears
  • live plant whole-mount preparations
  • live cell cultures
Specifications
Contrast MethodsOPTIONAL: Differential interference contrast (DIC), Senarmont method (rotating polarizer), STANDARD: Bright-field, OPTIONAL: Phase contrast (PhL; Ph1; Ph2)
Dimensions (L x W x H)30 in. x 22 in. x 29 in.
For Use With (Equipment)ArcturusXT™ LCM Instrument
IncludesIncludes one ArcturusXT™ Laser Microdissection Instrument.
Laser FeaturesSTANDARD: Infrared (IR) Capture Laser: Solid-state near-IR (810 nm), OPTIONAL: Enhanced UV Cutting Laser: (345 nm) adjustable current and pulse frequency, OPTIONAL: Basic UV Cutting Laser: Solid-state passive Q-switched diode-pumped (355 nm)
MicroscopeOPTIONAL: Binoculars and CFI 10x eyepieces, STANDARD: Nikon Eclipse™ Ti-E microscope base, STANDARD: Standard microscope operation outside of LCM operating software
ObjectivesOPTIONAL: 4x 20x 60x 100x dry and 100x oil Nikon CFI60 objectives, STANDARD: 2x 10x and 40x Nikon CFI60 objectives
OpticsOPTIONAL: Nikon Diascopic Illumination Tower for contrast imaging (100 W halogen lamp), STANDARD: High-intensity LED illumination system
Product LineArcturusXT
Quantity1 instrument
StageOPTIONAL: Two-position stage insert for large slides (75 x 25 mm; 75 x 38 mm; 75 x 50 mm), OPTIONAL: Stage insert for Petri dish: 50 mm x 7 mm, STANDARD: Motorized and trackball-actuated in X and Y axes with 1 μm precision, STANDARD: Stage insert for three 75 mm x 25 mm slides
System Requirements2 x 500 GB hard drives-RAID 1, DVD ± RW drive, 3.0 GHz Intel Core 4 (min), 1280 x 1024 dpi resolution monitor, Interactive pen display monitor, Windows 7 Pro, 4 GB RAM (min)
Unit Size1 instrument

Frequently asked questions (FAQs)

I am having trouble assessing the RNA quality from formalin-fixed, paraffin-embedded samples after laser capture microdissection (LCM). Can you offer some tips?

Formalin-fixed paraffin-embedded (FFPE) samples introduce unique challenges for gene expression profiling and gene expression quantitation, including chemical modification and fragmentation of RNA molecules. The initial paraffin blot preparation and storage significant affect the RNA quality. Archival FFPE samples present additional challenges due to increased RNA degradation over time. As a result, not all FFPE samples contain high quality RNA. 

In addition, a typical Bioanalyzer profile of RNA from an FFPE sample can look fragmented and degraded and as a result, that approach may not be useful in determining the transcribability of your RNA. Therefore, a tissue scrape test is recommended. You can use the entire adjacent section to isolate RNA and to access the RNA quantity and quality for intact RNA. Two sets of β-actin gene-specific primers designed to amplify short segments of DNA within the β-actin target sequence from the 5’ and 3’ of the β-actin gene can be used to estimate the amount of RNA in a given sample in relation to β-actin content using real-time PCR. The RNA quantity derived from the 3' primer set is used to quantitate the RNA in the FFPE tissue scrape. The ratio of the RNA yield obtained from both sets of PCR primers is the 3'⁄5' ratio and is used as an indication of RNA quality. If there is less product yield of the 5’ β-actin primers, it indicates that there is less full length of RNA.

I am getting poor quality of RNA from my LCM samples. How can I improve it?

The dissection and embedding steps are critical for the RNA quality for LCM samples. We suggest using the entire adjacent section or dissecting a large area of the section (>1000 cells) for RNA isolation. Before proceeding to LCM microdissection, we recommend assessing the quality of RNA isolated from the adjacent section. With good amount of RNA, one can assess the RNA quantity and quality using the Qubit RNA HS Assay Kit and the Agilent Bioanalyzer. This will help to make sure that good quality RNA is obtained from a low number of LCM cells.

What samples can be used with the Arcuturus PicoPure RNA Isolation Kit?

The Arcturus PicoPure RNA Isolation Kit removes total cellular RNA from pico-scale samples including frozen sections, alcohol fixed-, or fresh samples. Please note, samples fixed with formaldehyde are not recommended for use with this kit.

What kit do you recommend using for DNA isolation from Arcturus Laser Capture Microdissection (LCM) samples?

The Arcturus PicoPure DNA Extraction Kit (Cat. No. KIT0103) offers an easy, streamlined genomic extraction procedure that produces PCR-ready DNA. It allows you to extract and amplify DNA in the same tube, without organic extraction or spin columns, and to recover DNA from as few as 10 cells prepared by laser capture microdissection (LCM) or other tissues. The kit provides conveniently packaged, stable Proteinase K, PCR-compatible DNA Reconstitution Buffer and a complete user guide. 

What other kits have been used for RNA isolation from Arcturus Laser Capture Microdissection (LCM) samples?

Some other kits have been used for RNA isolation from LCM cells. These kits include the RecoverAll Total Nucleic Acid Isolation Kit for Formalin-Fixed Paraffin-Embedded (FFPE) (Cat. No. AM1975), RecoverAll Multi-Sample RNA/DNA Isolation Workflow (Cat. No. A26135), and the RNAqueous- Micro Total RNA Isolation Kit (Cat. No. AM19310).

Citations & References (69)

Citations & References
Abstract
A requirement for Lim domain binding protein 1 in erythropoiesis.
Authors:Li L, Lee JY, Gross J, Song SH, Dean A, Love PE
Journal:J Exp Med
PubMed ID:21041453
During erythrocyte development, the nuclear cofactor Lim domain binding protein 1 (Ldb1) functions as a core subunit of multiprotein DNA binding complexes that include the transcription factors Scl and Gata-1 and the Lim-only adapter Lmo2. Scl, Gata-1, and Lmo2 are each required for erythropoiesis, suggesting that Ldb1-nucleated transcription complexes regulate ... More
The effect of neurogenin3 deficiency on pancreatic gene expression in embryonic mice.
Authors:Petri A, Ahnfelt-Ronne J, Frederiksen KS, Edwards DG, Madsen D, Serup P, Fleckner J, Heller RS
Journal:J Mol Endocrinol
PubMed ID:17032746
To understand the molecular mechanisms regulating pancreatic endocrine development and function, pancreatic gene expression was compared between Ngn3-deficient mice and littermate controls on embryonic days 13 and 15. Microarray analysis identified 504 genes with significant differences in expression. Fifty-two of these showed at least twofold reduction in Ngn3 knockouts compared ... More
Dynamic changes in the expression of DEP-1 and other PDGF receptor-antagonizing PTPs during onset and termination of neointima formation.
Authors:Kappert K, Paulsson J, Sparwel J, Leppanen O, Hellberg C, Ostman A, Micke P
Journal:Faseb J
PubMed ID:17158785
'Growth factor-dependent tissue remodeling, such as restenosis, is believed to be predominantly regulated by changes in expression of receptor-tyrosine-kinases (RTKs) and their ligands. As endogenous antagonists of RTKs, protein-tyrosine-phosphatases (PTPs) are additional candidate regulators of these processes. Using laser-capture-microdissection and quantitative RT-polymerase chain reaction (qRT-PCR), we investigated the layer-specific ... More
Molecular mechanisms of induction of antigen-specific allograft tolerance by intranasal peptide administration.
Authors:Derbyshire K, Addey C, Coe D, Stuckey DW, Muezzin H, Bubier JA, Shaffer DJ, Roopenian DC, Chai JG, Scott DM
Journal:J Immunol
PubMed ID:21490154
'We have previously shown that intranasal (i.n.) administration of a single MHC class II-restricted HY peptide to female mice induces tolerance to up to five additional epitopes expressed on test male grafts, a phenomenon known as linked suppression. In this study, we investigated the molecular mechanisms involved both in the ... More
Highly specific alternative splicing of transcripts encoding BK channels in the chicken's cochlea is a minor determinant of the tonotopic gradient.
Authors:Miranda-Rottmann S, Kozlov AS, Hudspeth AJ
Journal:Mol Cell Biol
PubMed ID:20479127
'The frequency sensitivity of auditory hair cells in the inner ear varies with their longitudinal position in the sensory epithelium. Among the factors that determine the differential cellular response to sound is the resonance of a hair cell''s transmembrane electrical potential, whose frequency correlates with the kinetic properties of ... More