Click-iT™ EdU Alexa Fluor™ 647 Flow Cytometry Assay Kit
Click-iT™ EdU Alexa Fluor™ 647 Flow Cytometry Assay Kit
Invitrogen™

Click-iT™ EdU Alexa Fluor™ 647 Flow Cytometry Assay Kit

Green features
The Click-iT™ EdU Alexa Fluor™ 647 Flow Cytometry Assay Kit provides a simplified, more robust assay for analyzing DNA replicationRead more
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Catalog NumberQuantity
C1042450 assays
C10419100 assays
Catalog number C10424
Price (USD)
1.153,44
Each
Add to cart
Quantity:
50 assays
Price (USD)
1.153,44
Each
Add to cart
The Click-iT™ EdU Alexa Fluor™ 647 Flow Cytometry Assay Kit provides a simplified, more robust assay for analyzing DNA replication in proliferating cells as compared to traditional BrdU methods. Newly synthesized DNA is analyzed using the 633/5 nm laser of the flow cytometer.

Accurate--Superior Results compared to BrdU Assays
Fast--Results in as little as 90 minutes
Economical--More assays per kit

View selection guide for all Click-iT™ EdU and Click-iT™ Plus EdU assays for flow cytometry.

An Advanced Method Giving You Results Superior to BrdU
The most accurate method of proliferation analysis is direct measurement of DNA synthesis. Originally, this was performed through incorporation of radioactive nucleosides, i.e., 3H-thymidine. This method was replaced by antibody-based detection of the nucleoside analog bromodeoxyuridine (BrdU). The Click-iT™ EdU Flow Cytometry Assay Kits are novel alternatives to the BrdU assay. EdU (5-ethynyl-2´-deoxyuridine) is a thymidine analog which is incorporated into DNA during active DNA synthesis. Detection is based on click chemistry: a copper catalyzed covalent reaction between an azide and an alkyne. In this application, the alkyne is found in the ethynyl moiety of EdU, while the azide is coupled to Alexa Fluor ™ 488, Alexa Fluor™ 647, or Pacific BlueTM dyes. Standard flow cytometry methods are used for determining the percentage of S-phase cells in the population (Fig 1).

Mild Conditions Allow Use with Cell Cycle Dyes and Antibodies
The advantages of Click-iT™ EdU labeling are readily evident while performing the assay (Fig 2). The small size of the dye azide allows for efficient detection of the incorporated EdU using mild conditions, while standard aldehyde-based fixation and detergent permeabilization are sufficient for the Click-iT™ detection reagent to gain access to the DNA. This is in contrast to BrdU assays that require DNA denaturation (using HCl, heat, or digestion with DNase) to expose the BrdU so that it may be detected with an anti-BrdU antibody. Sample processing for the BrdU assay can result in signal alteration of the cell cycle distribution as well as destruction of antigen recognition sites when using the HCl method. In contrast, the easy-to-use EdU cell proliferation kit is compatible with cell cycle dyes. This EdU assay kit can also be multiplexed with antibodies against surface and intracellular markers.

Quick and Simple Protocol
The Click-iT™ EdU protocol is based on the aldehyde fixation and detergent permeabilization steps for immunohistochemical antibody labeling, but EdU is compatible with other
fixation/permeabilization agents including saponin and methanol. In just five steps you’ll be ready to analyze your cell proliferation data:

• Treat cells with EdUM
• Fix and permeabilize cells
• Detect S-phase cells with Click-iT™ detection cocktail for 30 min
• Wash once
• Analyze

Get Accurate Results Economically
By increasing the number of assays per kit, the Click-IT™ EdU Alexa Fluor™ 647 Flow Cytometry Assay Kit is less expensive than the traditional BrdU assays making them ideal for large experiments.

For research use only. Not intended for any human or animal therapeutic of diagnostic use.
For Research Use Only. Not for use in diagnostic procedures.
Specifications
Detection MethodFluorescence
Dye TypeAlexa Fluor™ 647
FormatTube(s)
Green FeaturesLess hazardous
Quantity50 assays
Shipping ConditionRoom Temperature
Emission650/670
For Use With (Equipment)Flow Cytometer
Product LineClick-iT
Product TypeFlow Cytometry Assay Kit
Unit SizeEach
Contents & Storage
Contains EdU (5-ethynyl-2' -deoxyuridine), Alexa Fluor™ 647 azide, anhydrous dimethylsulfoxide (DMSO), Click-iT™ fixative, Click-iT™ saponin-based permeabilization and wash buffer, copper (II) sulfate,, and Click-iT™ EdU buffer additive.
  • Store at 2°C to 8°C
  • Dessicate and protect from light.

    Frequently asked questions (FAQs)

    I will be performing a cell proliferation assay using Click-iT EdU kit. At what point can I stop overnight, or do I have to perform all the steps continuously?

    One may store the sample after fixation overnight in PBS at 4oC. For longer storage (<1 week) , store in buffer with 1-2% formaldehyde or in formalin to limit microbial growth. If you use sodium azide as a microbial inhibitor, it must be completely removed prior to the Click-iT reaction.

    Find additional tips, troubleshooting help, and resources within our Cell Viability, Proliferation, Cryopreservation, and Apoptosis Support Center.

    Can I combine Click-iT or Click-iT Plus reactions with phalloidin conjugates used for actin staining?

    We do not recommend using phalloidin conjugates for staining actin in combination with traditional Click-iT or Click-iT Plus reactions since phalloidin is extremely sensitive to the presence of copper.

    For staining actin in combination with traditional Click-iT or Click-iT Plus reactions, we recommend using anti-α-actin antibodies for staining actin in the cytoskeleton. You can find a list of our actin antibodies here.

    Another option would be to use the Click-iT Plus Alexa Fluor Picolyl Azide Toolkit (Cat. Nos. C10641, C10642, C10643). These Click-iT Plus toolkits provide Copper and Copper protectant separately which makes it easier to titrate the copper concentration to obtain optimal labeling with minimal copper-mediated damage. You may need to optimize the click reaction with the lowest possible concentration of copper and then perform the phalloidin staining.

    Find additional tips, troubleshooting help, and resources within our Cell Analysis Support Center.

    Are the Alexa Fluor azides from Click-iT EdU kits available separately?

    Yes, but the standalone products are not shipped at the same amount as provided in the Click-iT EdU kits; the amount of dye-azide provided in the Click-iT kits is proprietary information. See these catalog numbers for the standalone products:
    - Cat. No. A10266: Alexa Fluor 488 azide
    - Cat. No. A10270: Alexa Fluor 594 azide
    - Cat. No. A10277: Alexa Fluor 647 azide

    Find additional tips, troubleshooting help, and resources within our Cell Analysis Support Center.

    I am observing no signal or very low specific signal for my click-labeled samples. What can I do to improve the signal?

    The click reaction is only effective when copper is in the appropriate valency. Azides and alkynes will not react with each other without copper. Make sure that the click reaction mixture is used immediately after preparation when the copper (II) concentration is at its highest.
    Do not use additive buffer that has turned yellow; it must be colorless to be active.
    Cells need to be adequately fixed and permeabilized for the TdT enzyme and click reagents to have access to the nucleus. Tissue samples require digestion with proteinase K or other proteolytic enzymes for sufficient TdT access.
    Some reagents can bind copper and reduce its effective concentration available to catalyze the click reaction. Do not include any metal chelator (e.g., EDTA, EGTA, citrate, etc.) in any buffer or reagent prior to the click reaction. Avoid buffers or reagents that include other metal ions that may be o xidized or reduced. It may be help to include extra wash steps on the cell or tissue sample before performing the click reaction.
    You can repeat the click reaction with fresh reagents to try to improve signal. Increasing the click reaction time longer than 30 minutes will not improve a low signal. Performing a second, 30 minute incubation with fresh click reaction reagents is more effective at improving labeling.
    Your cells may not be apoptotic. Prepare a DNase I-treated positive control to verify that the TdT enzymatic reaction and click labeling reaction are working correctly.

    Find additional tips, troubleshooting help, and resources within our Labeling Chemistry Support Center.

    I am observing high non-specific background when I image my Click-iT EdU TUNEL-labeled samples. What is causing this and what can I do to reduce the background?

    The click reaction is very selective between an azide and alkyne. No other side reactions are possible in a biological system. Any non-specific background is due to non-covalent binding of the dye to various cellular components. The Select FX Signal Enhancer is not effective at reducing non-specific charge-based binding of dyes following the click reaction; we do not recommend its use with the Click-iT detection reagents. The best method to reduce background is to increase the number of BSA washes. You should always do a no-dye or no-click reaction control under the same processing and detection conditions to verify that the background is actually due to the dye and not autofluorescence. You should also perform the complete click reaction on a no-TdT enzyme control sample to verify the specificity of the click reaction signal.

    Find additional tips, troubleshooting help, and resources within our Cell Analysis Support Center.

    Citations & References (4)

    Citations & References
    Abstract
    Polybrene inhibits human mesenchymal stem cell proliferation during lentiviral transduction.
    Authors:Lin P, Correa D, Lin Y, Caplan AI,
    Journal:PLoS One
    PubMed ID:21887340
    'Human mesenchymal stem cells (hMSCs) can be engineered to express specific genes, either for their use in cell-based therapies or to track them in vivo over long periods of time. To obtain long-term expression of these genes, a lentivirus- or retrovirus-mediated cell transduction is often used. However, given that the ... More
    Identifying disruptors of male germ cell development by small molecule screening in ex vivo gonad cultures.
    Authors:Wakeling SI, Miles DC, Western PS,
    Journal:BMC Res Notes
    PubMed ID:23631647
    'Germ cell development involves formation of the spermatogenic or oogenic lineages from the bipotential primordial germ cells. Signaling mechanisms in the fetal testis and ovary determine whether germ cells enter the male or female developmental pathway, respectively. These signaling processes underpin an important phase of germ cell development, disruption of ... More
    Constitutive phosphorylation of GATA-1 at serine²6 attenuates the colony-forming activity of erythrocyte-committed progenitors.
    Authors:Lin KR, Li CL, Yen JJ, Yang-Yen HF,
    Journal:
    PubMed ID:23717580
    We previously reported that IL-3 signaling induces phosphorylation of GATA-1 at the serine²6 position, which contributes to IL-3-mediated anti-apoptotic response. Here, we demonstrate that phosphorylation of GATA-1 at serine²6 is also transiently induced in cells of the erythroid lineage (primary erythroblasts and erythrocyte-committed progenitors [EPs]) by erythropoietin (EPO), the principal ... More
    Aeroallergen challenge promotes dendritic cell proliferation in the airways.
    Authors:Veres TZ, Voedisch S, Spies E, Valtonen J, Prenzler F, Braun A,
    Journal:J Immunol
    PubMed ID:23267021
    Aeroallergen provocation induces the rapid accumulation of CD11c(+)MHC class II (MHC II)(+) dendritic cells (DCs) in the lungs, which is driven by an increased recruitment of blood-derived DC precursors. Recent data show, however, that well-differentiated DCs proliferate in situ in various tissues. This may also contribute to their allergen-induced expansion; ... More