Clariom™ S Array, human
Clariom™ S Array, human
Applied Biosystems™

Clariom™ S Array, human

Obtain a gene-level view of the human transcriptome with a Clariom S Assay for human samples. Clariom S assays serveRead more
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Catalog NumberQuantity
9029162 reactions
Catalog number 902916
Price (KRW)
467,000
Each
Add to cart
Quantity:
2 reactions
Price (KRW)
467,000
Each
Add to cart
Obtain a gene-level view of the human transcriptome with a Clariom S Assay for human samples. Clariom S assays serve as a next-generation transcriptome-wide gene-level expression profiling tool, which allows for the fastest, simplest, and most scalable path to generating the results you need for your research. Clariom S assays are the tools of choice to find expression biomarkers with known function as quickly, easily, and cost-effectively as possible.

Simple, swift biomarker discovery
• Accurately measure gene-level expression from >20,000 well-annotated genes to get to answers quickly
• Go from data to insight in minutes with intuitive, highly visual, free analysis software designed for the biologist

Clariom S solutions are available in formats for single-sample (cartridge array) processing on the GeneChip 3000 system. The complete solution comes with reagents and fast, simple Transcriptome Analysis Console (TAC) software to analyze and visualize global expression patterns of genes, pathways, and network interactions in minutes.

Find answers, move on
Although the number of known transcribed genes has expanded rapidly in recent years, knowledge of the function of each gene is still evolving. Many genes and transcripts found in databases are poorly annotated or unannotated, which can complicate and prolong data analysis and interpretation. Clariom S assays focus on well-annotated genes, providing researchers with the ability to perform gene-level expression profiling studies and to quickly assess changes in key genes and pathways. With less time required for data analysis, Clariom S assays help researchers reach conclusions more rapidly.

Get the truest level of gene-level expression
To generate robust gene-level expression, Clariom S assays detect only the exons present in all known transcript isoforms expressed from a single gene locus-constitutive exons. This differs from other gene-level array technologies and shallow RNA-Seq, which provide either a biased view of gene expression or data that are complicated by variation in expression of transcript variants. By detecting only constitutive exons throughout the length of each known gene, Clariom S assays generate the most accurate and truest measurement of gene-level expression available today.

Keeping biomarker identification across the transcriptome simple and swift, a Clariom S Assay provides you with the coverage you require, the reproducibility you need, and the insights you want to act on your discoveries.
For Research Use Only. Not for use in diagnostic procedures.
Specifications
IncludesClariom S 2 Arrays
Product LineApplied Biosystems
Quantity2 reactions
Shipping ConditionApproved for shipment at Room Temperature or on Wet or Dry Ice
TypeS Array
ArrayTranscriptome Profiling
FormatArray Cartridge
Number of Arrays2 arrays
SpeciesHuman
Unit SizeEach
Contents & Storage
Clariom S 2 Arrays, human, store at 4°C

Frequently asked questions (FAQs)

What reagent kit should I use with my array?

Please refer to the Microarray Reagent Guide for Arrays and Expression Kits to match the correct reagents your array.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

Why is it important to use Tough-Spots® labels when using GeneChip cartridge arrays?

Tough-Spots® labels are small adhesive stickers used to temporarily seal the backs of cartridge arrays during the overnight hybridization step. They are required to prevent loss of volume due to evaporation through the septa. We recommend using Tough-Spots® labels on Rolls from USA Scientific (Item No. 9185-0000)

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

What are the respective hybridization volumes based on array format for Affymetrix gene expression arrays?

Proper hybridization volume is critical to obtaining an even signal across a given array. Too little volume can lead to black circles in the middle of the array. Too much volume can leak out of the back of the array. The correct hybridization volume leaves enough room for a small air bubble to circulate around the array surface during the overnight hybridization. Here are the recommended hybridization and fill volumes based on the array format:
Array Format; Hybridization Volume; Fill Volume
- 49 Format (Standard); 200 µL; 250 µL
- 64 Format; 200 µL; 250 µL
- 100 Format (Midi); 130 µL; 160 µL
- 169 Format (Mini); 80 µL; 100 µL
- 400 Format (Micro); 80 µL; 100µL

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

How are transcript IDs assigned for WT arrays if a gene has multiple transcript IDs?

The first assigned mRNA/gene that is listed in the annotation file for a given probe set or transcript cluster is considered the "best" assignment based on data source quality ranking and assignment scoring system. To get a single best mRNA/gene assignment you can simply take the first one in the list in the annotation file.

Sometimes, there might be multiple best hits between transcript clusters (or probe set) and a mRNA/gene, with identical score and data source quality. In that case, the transcript assignments are ranked based on their descriptions (e.g., title from the GenBank record).

For transcript clusters that detect genes that are alternatively spliced, the different spliced forms will be ranked by length with the longest ones listed first.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.

How many data sources were used for the Clariom S array?

We used 15 databases to design the Clariom S array. These databases are listed in the Clariom S solutions data sheet that can be found on the Clariom S assay, mouse product page, under Documents > Product Literature: https://www.thermofisher.com/order/catalog/product/902930?SID=srch-srp-902930#/902930.

Find additional tips, troubleshooting help, and resources within our Microarray Analysis Support Center.