Oncomine™ Myeloid Assay GX v2
Ion Torrent™

Oncomine™ Myeloid Assay GX v2

The Ion Torrent Oncomine Myeloid Assay GX v2 is a comprehensive targeted next-generation sequencing (NGS) assay designed for sensitive detectionMás información
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Número de catálogoCantidad
A5069432 muestras
Número de catálogo A50694
Precio (MXN)
353,449.66
Each
Cantidad:
32 muestras
Precio (MXN)
353,449.66
Each
The Ion Torrent Oncomine Myeloid Assay GX v2 is a comprehensive targeted next-generation sequencing (NGS) assay designed for sensitive detection of myeloid disorder-associated DNA mutations and RNA fusion transcripts in blood and bone marrow samples. This assay is compatible with the Genexus Integrated Sequencer, which performs library preparation, sequencing, analysis, and reporting in an automated sample-to-result workflow. Depending on the workflow, results can be obtained in as little as a single day.

Oncomine Myeloid Assay GX v2 features include:
• Comprehensive coverage of key DNA mutations and >700 fusion transcripts associated with myeloid disorders
• Automated sample-to-report workflow on the Genexus sequencer in less than a day
• Sequencing of up to eight samples (DNA & RNA) per lane on a GX5 Chip in a single run
• Less than 15 minutes hands-on time
• Detection of somatic variants down to 5% allele frequency

The Oncomine Myeloid Assay GX v2 is designed to assist in myeloid cancer research. The DNA panel is comprised of 45 key genes, while the RNA panel includes a broad fusion panel of 30 driver genes, covering the most relevant targets associated with major myeloid disorders, including acute myeloid leukemia (AML), myeloid dysplastic syndrome (MDS), myeloproliferative neoplasms (MPN), chronic myeloid leukemia (CML), chronic myelomonocytic leukemia (CMML), and juvenile myelomonocytic leukemia (JMML).

The multiplex primer design leverages Ion AmpliSeq technology to generate results from multiple samples in a single run. Sequencing results are automatically analyzed by Genexus software using an optimized assay-specific analysis workflow.

The assay kit includes three pools of Ion AmpliSeq oligonucleotide primers (a 2-pool DNA panel and 1-pool RNA panel) and Genexus Strips 1 & 2-AS library reagents, enough to sequence up to 32 samples on the Genexus Integrated Sequencer. One end-to-end sequencing run uses one lane on the GX5 Chip and accommodates up to eight samples. Additional Genexus sequencer reagents and supplies must be ordered separately.
Especificaciones
Para utilizar con (aplicación)Secuenciación
Para utilizar con (equipo)Genexus™ Integrated Sequencer
Cantidad32 muestras
Tipo de muestraDNA and RNA from Blood or Bone Marrow
Unit SizeEach

Preguntas frecuentes

Which components does the assay provide?

The assay kit includes the following components sufficient for up to 32 x 3-pool reactions (32 x 2-pool DNA reactions and 32 x 1-pool RNA reactions):

Myeloid DNA Pool 1 v2 (position 1)
2 packs of 4 tubes each, 140 ul per tube, magenta carrier color, 2 x 16 reactions (4 reactions/tube) stored at-30C to -10C

Myeloid DNA Pool 2 v2 (position 1)
2 packs of 4 tubes each, 140 ul per tube, pale green carrier color, 2 x 16 reactions (4 reactions/tube) stored at -30C to -10C

Myeloid RNA Pool 1 v2 (position 1)
1 pack of 8 tubes, 70 ul per tube, pale orange carrier color, 32 reactions (4 reactions/tube) stored at -30C to -10C

Genexus Library Strips 1 and 2-AS
3 packs of 8 strips each (total 24 strips of each type); Strip 1 stored at 2C to 8C, Strip 2-AS stored at -30C to -10C

What components and formats are included in the Oncomine Myeloid Assay GX v2 kit?

The Oncomine Myeloid Assay GX v2 kit includes DNA and RNA panel components configured for up to 32 reactions. The kit contains:
• DNA panels provided in two pools across multiple tubes
• RNA panel provided as a single pool
• Genexus Library Strips for automated processing These components support both DNA and RNA workflows within a single kit.

Can components of the Oncomine Myeloid Assay GX v2 kit be ordered separately?

No, the Oncomine Myeloid Assay GX v2 kit (Cat. No. A50694) is offered as a complete kit for 32 samples. Individual panel components are not available as standalone products.

What do I need to do to prep Genexus Templating Strips 3B-GX5 and 4-GX5 (Cat. No. A49782) for use on the Genexus platform?

Remove the templating strips from their boxes in the refrigerator or freezer and get them ready them for loading in the sequencer by equilibrating to/thawing at room temperature for 30 mins. Confirm that the strip contents are completely thawed before loading in the sequencer. If you are delayed in loading, keep the thawed strips on ice or at 4 degrees C until you load them in the sequencer.

Genexus Strip 3B‑GX5 contain magnetic beads in one or two positions, yellow or brown in color, that sometimes get trapped in the upper “keyhole” of the tube. Dislodge these beads from the keyhole before installing the strip in the sequencer using the following procedure for each strip:
- Invert the strip 3-4 times to dislodge beads that are trapped in the keyholes.
- To remove any remaining beads and liquid from the keyholes, grasp the strip at one end with the strip seal facing up, then swing the strip with a rapid, downward centrifugal arm motion, ending with a sharp wrist-flick.
- Grasp the strip at the other end, then repeat the centrifugal motion.
- Check tube positions for significant amounts of beads that are still trapped in keyholes and then repeat the centrifugal motion, if needed. It is acceptable if a few beads remain in the keyhole or on the tube wall, but most should be either in suspension or in a pellet at the bottom of the tube.

What is the difference between Genexus Templating Strips 3B-GX5 and 4-GX5 (Cat. No. A49782) and Genexus Templating Strips 3-GX5 and 4 (Cat. No. A40263)?

Genexus Templating Strips 3B-GX5 and 4-GX5 (Cat. No. A49782) has new Genexus Strip 3B that has the chemistry modified to improve templating and sequencing of GC rich regions.