Product Details

Primer Sequences

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Primer Chromosome Location

Chr.5: 26905782-26906322 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CDH9

Entrez Gene ID

1007

Gene Name

cadherin 9

Gene Aliases

-

UniGene

Hs.272212

Gene Chromosome Location

Chr.5: 26880600-27038582 on Build GRCh38

Transcripts

NM_016279.3

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
6573133	c.810G>A	p.Q270Q	Chr.5: 26905960-26905960 on Build GRCh38
3919905	c.805C>T	p.P269S	Chr.5: 26905965-26905965 on Build GRCh38
5714050	c.667G>A	p.D223N	Chr.5: 26906103-26906103 on Build GRCh38
1436952	c.757A>G	p.T253A	Chr.5: 26906013-26906013 on Build GRCh38
1436953	c.679G>T	p.E227*	Chr.5: 26906091-26906091 on Build GRCh38
1200507	c.718G>T	p.D240Y	Chr.5: 26906052-26906052 on Build GRCh38
256066	c.772C>A	p.L258M	Chr.5: 26905998-26905998 on Build GRCh38
1179135	c.797C>T	p.P266L	Chr.5: 26905973-26905973 on Build GRCh38
3697203	c.781G>A	p.V261I	Chr.5: 26905989-26905989 on Build GRCh38
400268	c.696_697CC>AA	p.Y232>?	Chr.5: 26906073-26906074 on Build GRCh38
6170716	c.811A>T	p.S271C	Chr.5: 26905959-26905959 on Build GRCh38
3947414	c.799C>A	p.R267R	Chr.5: 26905971-26905971 on Build GRCh38
449511	c.718G>A	p.D240N	Chr.5: 26906052-26906052 on Build GRCh38
279777	c.729C>A	p.G243G	Chr.5: 26906041-26906041 on Build GRCh38
4671032	c.666A>G	p.P222P	Chr.5: 26906104-26906104 on Build GRCh38
279778	c.811+1G>A	p.?	Chr.5: 26905958-26905958 on Build GRCh38
1695517	c.737G>A	p.G246E	Chr.5: 26906033-26906033 on Build GRCh38
6103469	c.789C>A	p.N263K	Chr.5: 26905981-26905981 on Build GRCh38
3854628	c.658G>A	p.A220T	Chr.5: 26906112-26906112 on Build GRCh38
6103468	c.758C>A	p.T253K	Chr.5: 26906012-26906012 on Build GRCh38
6512918	c.658G>T	p.A220S	Chr.5: 26906112-26906112 on Build GRCh38
6625184	c.690G>A	p.E230E	Chr.5: 26906080-26906080 on Build GRCh38
1067172	c.799C>T	p.R267*	Chr.5: 26905971-26905971 on Build GRCh38
6103467	c.728G>A	p.G243D	Chr.5: 26906042-26906042 on Build GRCh38
373670	c.793C>A	p.P265T	Chr.5: 26905977-26905977 on Build GRCh38
159900	c.771G>A	p.T257T	Chr.5: 26905999-26905999 on Build GRCh38
5868383	c.746C>T	p.S249F	Chr.5: 26906024-26906024 on Build GRCh38
6103466	c.723G>T	p.M241I	Chr.5: 26906047-26906047 on Build GRCh38
159899	c.706A>T	p.I236L	Chr.5: 26906064-26906064 on Build GRCh38
5061030	c.795T>C	p.P265P	Chr.5: 26905975-26905975 on Build GRCh38
1292122	c.685A>G	p.R229G	Chr.5: 26906085-26906085 on Build GRCh38
5043060	c.713C>A	p.A238D	Chr.5: 26906057-26906057 on Build GRCh38
6500002	c.686G>A	p.R229K	Chr.5: 26906084-26906084 on Build GRCh38
7420519	c.708A>T	p.I236I	Chr.5: 26906062-26906062 on Build GRCh38
1567722	c.650T>G	p.I217R	Chr.5: 26906120-26906120 on Build GRCh38
738197	c.679G>A	p.E227K	Chr.5: 26906091-26906091 on Build GRCh38
5918603	c.736G>A	p.G246R	Chr.5: 26906034-26906034 on Build GRCh38
3014134	c.724G>A	p.G242S	Chr.5: 26906046-26906046 on Build GRCh38
6535563	c.703G>C	p.V235L	Chr.5: 26906067-26906067 on Build GRCh38
3014137	c.677G>T	p.R226I	Chr.5: 26906093-26906093 on Build GRCh38
5403295	c.749G>A	p.G250E	Chr.5: 26906021-26906021 on Build GRCh38
591794	c.800G>A	p.R267Q	Chr.5: 26905970-26905970 on Build GRCh38
4880231	c.674G>A	p.S225N	Chr.5: 26906096-26906096 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs771361447	Chr.5: 26906000-26906000 on Build GRCh38
rs953590005	Chr.5: 26906194-26906194 on Build GRCh38
rs749832686	Chr.5: 26906115-26906115 on Build GRCh38
rs768916104	Chr.5: 26906166-26906166 on Build GRCh38
rs865903351	Chr.5: 26905877-26905877 on Build GRCh38
rs547793068	Chr.5: 26905812-26905813 on Build GRCh38
rs753887521	Chr.5: 26906075-26906075 on Build GRCh38
rs962117788	Chr.5: 26905894-26905894 on Build GRCh38
rs753710716	Chr.5: 26905928-26905928 on Build GRCh38
rs1010336634	Chr.5: 26905934-26905934 on Build GRCh38
rs951706686	Chr.5: 26905813-26905813 on Build GRCh38
rs780796526	Chr.5: 26906110-26906110 on Build GRCh38
rs765127921	Chr.5: 26906081-26906081 on Build GRCh38
rs563743113	Chr.5: 26905968-26905968 on Build GRCh38
rs1027158189	Chr.5: 26906212-26906212 on Build GRCh38
rs115746002	Chr.5: 26906180-26906180 on Build GRCh38
rs772276850	Chr.5: 26906031-26906031 on Build GRCh38
rs753246262	Chr.5: 26905973-26905973 on Build GRCh38
rs780011027	Chr.5: 26906101-26906101 on Build GRCh38
rs1052455488	Chr.5: 26905994-26905994 on Build GRCh38
rs531958842	Chr.5: 26905970-26905970 on Build GRCh38
rs770062722	Chr.5: 26905831-26905831 on Build GRCh38
rs984427530	Chr.5: 26905821-26905821 on Build GRCh38
rs1024762530	Chr.5: 26906296-26906296 on Build GRCh38
rs368734430	Chr.5: 26905811-26905811 on Build GRCh38
rs779354884	Chr.5: 26906122-26906122 on Build GRCh38
rs1044998555	Chr.5: 26905959-26905959 on Build GRCh38
rs534408194	Chr.5: 26906177-26906177 on Build GRCh38
rs772362976	Chr.5: 26906151-26906151 on Build GRCh38
rs750232309	Chr.5: 26906093-26906093 on Build GRCh38
rs546667290	Chr.5: 26906225-26906225 on Build GRCh38
rs758905136	Chr.5: 26906079-26906079 on Build GRCh38
rs1005816666	Chr.5: 26906245-26906245 on Build GRCh38
rs5866810	Chr.5: 26905812-26905812 on Build GRCh38
rs73748531	Chr.5: 26906295-26906295 on Build GRCh38
rs771433767	Chr.5: 26906113-26906113 on Build GRCh38
rs962498077	Chr.5: 26906267-26906267 on Build GRCh38
rs776741900	Chr.5: 26906170-26906170 on Build GRCh38
rs1000694494	Chr.5: 26905903-26905903 on Build GRCh38
rs112543285	Chr.5: 26905919-26905919 on Build GRCh38
rs778435407	Chr.5: 26906261-26906261 on Build GRCh38
rs774752049	Chr.5: 26906012-26906012 on Build GRCh38
rs200215310	Chr.5: 26906124-26906124 on Build GRCh38
rs775745639	Chr.5: 26906044-26906044 on Build GRCh38
rs779923057	Chr.5: 26905971-26905971 on Build GRCh38
rs760898905	Chr.5: 26906045-26906045 on Build GRCh38
rs760810873	Chr.5: 26905924-26905924 on Build GRCh38
rs367702465	Chr.5: 26905984-26905984 on Build GRCh38
rs778721268	Chr.5: 26905942-26905942 on Build GRCh38
rs376504959	Chr.5: 26906164-26906164 on Build GRCh38
rs747657722	Chr.5: 26906112-26906112 on Build GRCh38
rs985392663	Chr.5: 26906236-26906236 on Build GRCh38
rs761788673	Chr.5: 26906077-26906077 on Build GRCh38
rs746507734	Chr.5: 26905979-26905979 on Build GRCh38
rs780851499	Chr.5: 26905989-26905989 on Build GRCh38
rs141361996	Chr.5: 26905999-26905999 on Build GRCh38
rs1041159504	Chr.5: 26906146-26906146 on Build GRCh38
rs917727649	Chr.5: 26905902-26905902 on Build GRCh38
rs35089884	Chr.5: 26905902-26905903 on Build GRCh38
rs907590630	Chr.5: 26905888-26905888 on Build GRCh38
rs758188211	Chr.5: 26906094-26906094 on Build GRCh38
rs761869098	Chr.5: 26906175-26906175 on Build GRCh38
rs991975251	Chr.5: 26905896-26905896 on Build GRCh38
rs371804173	Chr.5: 26906098-26906098 on Build GRCh38
rs375410885	Chr.5: 26905925-26905925 on Build GRCh38
rs751192934	Chr.5: 26906107-26906107 on Build GRCh38
rs759858123	Chr.5: 26906028-26906028 on Build GRCh38
rs752741982	Chr.5: 26905922-26905922 on Build GRCh38
rs917600465	Chr.5: 26905806-26905806 on Build GRCh38
rs971840677	Chr.5: 26906271-26906271 on Build GRCh38
rs200815583	Chr.5: 26906109-26906109 on Build GRCh38
rs548475393	Chr.5: 26906224-26906224 on Build GRCh38
rs1014554964	Chr.5: 26906248-26906248 on Build GRCh38
rs181166464	Chr.5: 26905853-26905853 on Build GRCh38
rs764120846	Chr.5: 26906069-26906069 on Build GRCh38
rs60558815	Chr.5: 26905847-26905848 on Build GRCh38
rs1020765252	Chr.5: 26905983-26905983 on Build GRCh38
rs757174822	Chr.5: 26905940-26905940 on Build GRCh38

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