Product Details

Primer Sequences
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Primer Chromosome Location
Chr.5: 140849606-140850102 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
PCDHA1
Entrez Gene ID
56147
Gene Name
protocadherin alpha 1
Gene Aliases
PCDH-ALPHA1
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140786136-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA2
Entrez Gene ID
56146
Gene Name
protocadherin alpha 2
Gene Aliases
PCDH-ALPHA2
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140794859-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA3
Entrez Gene ID
56145
Gene Name
protocadherin alpha 3
Gene Aliases
PCDH-ALPHA3
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140801198-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA4
Entrez Gene ID
56144
Gene Name
protocadherin alpha 4
Gene Aliases
CNR1, CNRN1, CRNR1, PCDH-ALPHA4
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140807074-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA5
Entrez Gene ID
56143
Gene Name
protocadherin alpha 5
Gene Aliases
CNR6, CNRN6, CNRS6, CRNR6, PCDH-ALPHA5
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140821776-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA6
Entrez Gene ID
56142
Gene Name
protocadherin alpha 6
Gene Aliases
CNR2, CNRN2, CNRS2, CRNR2, PCDH-ALPHA6
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140827922-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA7
Entrez Gene ID
56141
Gene Name
protocadherin alpha 7
Gene Aliases
CNR4, CNRN4, CNRS4, CRNR4, PCDH-ALPHA7
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140834384-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA8
Entrez Gene ID
56140
Gene Name
protocadherin alpha 8
Gene Aliases
PCDH-ALPHA8
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140841322-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Gene Symbol
PCDHA9
Entrez Gene ID
9752
Gene Name
protocadherin alpha 9
Gene Aliases
PCDH-ALPHA9
UniGene
Hs.199343
Gene Chromosome Location
Chr.5: 140847772-141012344 on Build GRCh38
Transcripts
NM_018900.3 NM_031411.2 NM_018905.2 NM_018906.2 NM_018907.3 NM_018908.2 NM_018909.3 NM_031849.2 NM_018910.2 NM_018911.2 NM_014005.4 NM_031857.1

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
1062236 c.1287C>T p.D429D Chr.5: 140849782-140849782 on Build GRCh38
4712018 c.1365C>T p.F455F Chr.5: 140849860-140849860 on Build GRCh38
345704 c.1456G>C p.E486Q Chr.5: 140849951-140849951 on Build GRCh38
1619625 c.1357C>T p.P453S Chr.5: 140849852-140849852 on Build GRCh38
5975384 c.1262A>G p.Y421C Chr.5: 140849757-140849757 on Build GRCh38
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SNP Detail

SNP ID Chromosome Location
rs558218817 Chr.5: 140849878-140849878 on Build GRCh38
rs782637866 Chr.5: 140849883-140849883 on Build GRCh38
rs147995655 Chr.5: 140849740-140849740 on Build GRCh38
rs781829307 Chr.5: 140849784-140849784 on Build GRCh38
rs782517549 Chr.5: 140849836-140849836 on Build GRCh38
rs782503645 Chr.5: 140849696-140849696 on Build GRCh38
rs782194493 Chr.5: 140849845-140849845 on Build GRCh38
rs149779533 Chr.5: 140850017-140850017 on Build GRCh38
rs782084624 Chr.5: 140849965-140849965 on Build GRCh38
rs782368934 Chr.5: 140849746-140849746 on Build GRCh38
rs267600396 Chr.5: 140849900-140849900 on Build GRCh38
rs782662285 Chr.5: 140849951-140849951 on Build GRCh38
rs782049441 Chr.5: 140849977-140849977 on Build GRCh38
rs191347173 Chr.5: 140849876-140849876 on Build GRCh38
rs782223960 Chr.5: 140849948-140849948 on Build GRCh38
rs782596330 Chr.5: 140849808-140849808 on Build GRCh38
rs34848125 Chr.5: 140849943-140849944 on Build GRCh38
rs781875705 Chr.5: 140849732-140849732 on Build GRCh38
rs553750365 Chr.5: 140849815-140849815 on Build GRCh38
rs374413183 Chr.5: 140850024-140850024 on Build GRCh38
rs140735832 Chr.5: 140849922-140849922 on Build GRCh38
rs782342432 Chr.5: 140849847-140849847 on Build GRCh38
rs782391352 Chr.5: 140849635-140849635 on Build GRCh38
rs536180374 Chr.5: 140849988-140849988 on Build GRCh38
rs782199558 Chr.5: 140850061-140850061 on Build GRCh38
rs370317629 Chr.5: 140849943-140849943 on Build GRCh38
rs555354385 Chr.5: 140850072-140850072 on Build GRCh38
rs782200197 Chr.5: 140849706-140849706 on Build GRCh38
rs373253394 Chr.5: 140849790-140849790 on Build GRCh38
rs59056023 Chr.5: 140849996-140849996 on Build GRCh38
rs150560525 Chr.5: 140849758-140849758 on Build GRCh38
rs540017466 Chr.5: 140850016-140850016 on Build GRCh38
rs781824733 Chr.5: 140849931-140849931 on Build GRCh38
rs201231291 Chr.5: 140849957-140849957 on Build GRCh38
rs764905783 Chr.5: 140849642-140849642 on Build GRCh38
rs35247528 Chr.5: 140850033-140850034 on Build GRCh38
rs549009408 Chr.5: 140849967-140849967 on Build GRCh38
rs141054640 Chr.5: 140849634-140849634 on Build GRCh38
rs782306625 Chr.5: 140850009-140850009 on Build GRCh38
rs782017581 Chr.5: 140850003-140850003 on Build GRCh38
rs782020365 Chr.5: 140849641-140849641 on Build GRCh38
rs375723432 Chr.5: 140849875-140849875 on Build GRCh38
rs781840161 Chr.5: 140850031-140850031 on Build GRCh38
rs143144725 Chr.5: 140850029-140850029 on Build GRCh38
rs782471432 Chr.5: 140850028-140850028 on Build GRCh38
rs144507871 Chr.5: 140849728-140849728 on Build GRCh38
rs782027933 Chr.5: 140849810-140849810 on Build GRCh38
rs781816382 Chr.5: 140849833-140849833 on Build GRCh38
rs781960430 Chr.5: 140850071-140850071 on Build GRCh38
rs575127415 Chr.5: 140849644-140849644 on Build GRCh38
rs564349145 Chr.5: 140849697-140849697 on Build GRCh38
rs781905467 Chr.5: 140849778-140849778 on Build GRCh38
rs782693800 Chr.5: 140849855-140849855 on Build GRCh38
rs782343095 Chr.5: 140849995-140849995 on Build GRCh38
rs781937410 Chr.5: 140849816-140849816 on Build GRCh38
rs557483002 Chr.5: 140849672-140849672 on Build GRCh38
rs70988779 Chr.5: 140850072-140850073 on Build GRCh38
rs782277317 Chr.5: 140850045-140850045 on Build GRCh38
rs781817396 Chr.5: 140849984-140849984 on Build GRCh38
rs144630020 Chr.5: 140849710-140849710 on Build GRCh38
rs782334734 Chr.5: 140850062-140850062 on Build GRCh38
rs781796419 Chr.5: 140850027-140850027 on Build GRCh38
rs782497568 Chr.5: 140850037-140850037 on Build GRCh38
rs139887265 Chr.5: 140849821-140849821 on Build GRCh38
rs562563367 Chr.5: 140849934-140849934 on Build GRCh38
rs781928576 Chr.5: 140849857-140849857 on Build GRCh38
rs527334652 Chr.5: 140849959-140849959 on Build GRCh38
rs782599904 Chr.5: 140849684-140849684 on Build GRCh38
rs368189634 Chr.5: 140850025-140850025 on Build GRCh38
rs782768269 Chr.5: 140849712-140849712 on Build GRCh38
rs782509368 Chr.5: 140849880-140849880 on Build GRCh38
rs372428582 Chr.5: 140849870-140849870 on Build GRCh38
rs193204731 Chr.5: 140849655-140849655 on Build GRCh38
rs782632699 Chr.5: 140849788-140849788 on Build GRCh38
rs373526467 Chr.5: 140849905-140849905 on Build GRCh38
rs782396245 Chr.5: 140850002-140850002 on Build GRCh38
rs781877204 Chr.5: 140849867-140849867 on Build GRCh38
rs147465571 Chr.5: 140849809-140849809 on Build GRCh38
rs151299460 Chr.5: 140849914-140849914 on Build GRCh38
rs782756982 Chr.5: 140849670-140849670 on Build GRCh38
rs782595225 Chr.5: 140849947-140849947 on Build GRCh38
rs566372258 Chr.5: 140849797-140849797 on Build GRCh38
rs782250224 Chr.5: 140850000-140850000 on Build GRCh38
rs781993576 Chr.5: 140849774-140849774 on Build GRCh38
rs781991729 Chr.5: 140849972-140849972 on Build GRCh38
rs782794463 Chr.5: 140849822-140849822 on Build GRCh38
rs782186186 Chr.5: 140849741-140849741 on Build GRCh38
rs17844327 Chr.5: 140849730-140849730 on Build GRCh38
rs373343060 Chr.5: 140850020-140850020 on Build GRCh38
rs251356 Chr.5: 140849941-140849941 on Build GRCh38
rs782001288 Chr.5: 140849747-140849747 on Build GRCh38
rs533987603 Chr.5: 140850038-140850038 on Build GRCh38
rs566560367 Chr.5: 140849950-140849950 on Build GRCh38
rs251355 Chr.5: 140849783-140849783 on Build GRCh38
rs544460228 Chr.5: 140849933-140849933 on Build GRCh38
rs17844332 Chr.5: 140850036-140850036 on Build GRCh38
rs7722927 Chr.5: 140849731-140849731 on Build GRCh38
rs151053430 Chr.5: 140849630-140849630 on Build GRCh38
rs782544509 Chr.5: 140849795-140849795 on Build GRCh38
rs533128247 Chr.5: 140849935-140849935 on Build GRCh38
rs17844330 Chr.5: 140849890-140849890 on Build GRCh38
rs782132115 Chr.5: 140849917-140849917 on Build GRCh38
rs782454693 Chr.5: 140849744-140849744 on Build GRCh38
rs200196783 Chr.5: 140849807-140849807 on Build GRCh38
rs782733346 Chr.5: 140849865-140849865 on Build GRCh38
rs140711682 Chr.5: 140849699-140849699 on Build GRCh38
rs145904051 Chr.5: 140849923-140849923 on Build GRCh38
rs762397793 Chr.5: 140849885-140849885 on Build GRCh38
rs782434463 Chr.5: 140849675-140849675 on Build GRCh38
rs148732691 Chr.5: 140849851-140849851 on Build GRCh38
rs141495063 Chr.5: 140849717-140849717 on Build GRCh38
rs138948867 Chr.5: 140849674-140849674 on Build GRCh38
rs782811595 Chr.5: 140849764-140849765 on Build GRCh38
rs145333813 Chr.5: 140849832-140849832 on Build GRCh38
rs782010944 Chr.5: 140849713-140849713 on Build GRCh38
rs782484904 Chr.5: 140849786-140849786 on Build GRCh38
rs781855984 Chr.5: 140849820-140849820 on Build GRCh38
rs150286933 Chr.5: 140849989-140849989 on Build GRCh38
rs782339631 Chr.5: 140849707-140849707 on Build GRCh38
rs140138948 Chr.5: 140849650-140849650 on Build GRCh38
rs782077016 Chr.5: 140849863-140849863 on Build GRCh38
rs575769097 Chr.5: 140849852-140849852 on Build GRCh38
rs782046330 Chr.5: 140849782-140849782 on Build GRCh38
rs145248721 Chr.5: 140849849-140849849 on Build GRCh38
rs781900935 Chr.5: 140849824-140849824 on Build GRCh38
rs782533558 Chr.5: 140849869-140849869 on Build GRCh38
rs782585786 Chr.5: 140849990-140849990 on Build GRCh38
rs782812018 Chr.5: 140849921-140849921 on Build GRCh38
rs553186286 Chr.5: 140849676-140849676 on Build GRCh38
rs782289245 Chr.5: 140849840-140849840 on Build GRCh38
rs782481269 Chr.5: 140849985-140849985 on Build GRCh38
rs190398483 Chr.5: 140849974-140849974 on Build GRCh38
rs782166017 Chr.5: 140850004-140850004 on Build GRCh38
rs376685406 Chr.5: 140849828-140849828 on Build GRCh38
rs782694989 Chr.5: 140849716-140849716 on Build GRCh38
rs782601435 Chr.5: 140849745-140849745 on Build GRCh38
rs782653916 Chr.5: 140849837-140849837 on Build GRCh38
rs369746155 Chr.5: 140849843-140849843 on Build GRCh38
rs369759015 Chr.5: 140849775-140849775 on Build GRCh38
rs782112953 Chr.5: 140849711-140849711 on Build GRCh38
rs371936538 Chr.5: 140849693-140849693 on Build GRCh38
rs781987951 Chr.5: 140849774-140849775 on Build GRCh38
rs782280962 Chr.5: 140849698-140849698 on Build GRCh38
rs781852827 Chr.5: 140849671-140849671 on Build GRCh38
rs561698085 Chr.5: 140849907-140849907 on Build GRCh38
rs782551390 Chr.5: 140850060-140850060 on Build GRCh38
rs201141536 Chr.5: 140850022-140850022 on Build GRCh38
rs17844329 Chr.5: 140849850-140849850 on Build GRCh38
rs781971261 Chr.5: 140849632-140849632 on Build GRCh38
rs140660802 Chr.5: 140849759-140849759 on Build GRCh38
rs782735585 Chr.5: 140849819-140849819 on Build GRCh38

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