Product Details

Primer Sequences

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Primer Chromosome Location

Chr.7: 27107565-27108109 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

HOXA3

Entrez Gene ID

3200

Gene Name

homeobox A3

Gene Aliases

HOX1, HOX1E

UniGene

Hs.659337

Gene Chromosome Location

Chr.7: 27106190-27152581 on Build GRCh38

Transcripts

NM_030661.4 NM_153631.2 XM_005249730.2 XM_005249731.2 XM_005249732.3 XM_006715715.2 XM_011515343.2

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
461610	c.1178C>T	p.S393L	Chr.7: 27108069-27108069 on Build GRCh38
261316	c.1267G>A	p.D423N	Chr.7: 27107980-27107980 on Build GRCh38
6514830	c.1244G>T	p.G415V	Chr.7: 27108003-27108003 on Build GRCh38
7252369	c.1204G>C	p.G402R	Chr.7: 27108043-27108043 on Build GRCh38
5609094	c.1169A>G	p.H390R	Chr.7: 27108078-27108078 on Build GRCh38
5609095	c.1206G>A	p.G402G	Chr.7: 27108041-27108041 on Build GRCh38
1698452	c.1151G>A	p.G384D	Chr.7: 27108096-27108096 on Build GRCh38
6250142	c.1263C>A	p.Y421*	Chr.7: 27107984-27107984 on Build GRCh38
5609093	c.1306G>A	p.E436K	Chr.7: 27107941-27107941 on Build GRCh38
402863	c.1197G>T	p.G399G	Chr.7: 27108050-27108050 on Build GRCh38
6681597	c.1203C>T	p.A401A	Chr.7: 27108044-27108044 on Build GRCh38
5908759	c.1180G>A	p.G394S	Chr.7: 27108067-27108067 on Build GRCh38
6548100	c.1281C>A	p.H427Q	Chr.7: 27107966-27107966 on Build GRCh38
367445	c.1256C>A	p.P419H	Chr.7: 27107991-27107991 on Build GRCh38
4654236	c.1290T>C	p.S430S	Chr.7: 27107957-27107957 on Build GRCh38
6681604	c.1275C>T	p.T425T	Chr.7: 27107972-27107972 on Build GRCh38
5025078	c.1239delG	p.P414fs*>30	Chr.7: 27108008-27108008 on Build GRCh38
317467	c.1326C>T	p.H442H	Chr.7: 27107921-27107921 on Build GRCh38
600804	c.1318C>T	p.L440F	Chr.7: 27107929-27107929 on Build GRCh38
3880391	c.1235C>T	p.P412L	Chr.7: 27108012-27108012 on Build GRCh38
6681601	c.1167C>T	p.P389P	Chr.7: 27108080-27108080 on Build GRCh38
6681598	c.1293G>T	p.Q431H	Chr.7: 27107954-27107954 on Build GRCh38
4802885	c.1142C>G	p.A381G	Chr.7: 27108105-27108105 on Build GRCh38
6177255	c.1310C>A	p.A437E	Chr.7: 27107937-27107937 on Build GRCh38
6193442	c.1175C>T	p.A392V	Chr.7: 27108072-27108072 on Build GRCh38
5585434	c.1317G>A	p.K439K	Chr.7: 27107930-27107930 on Build GRCh38
6850939	c.1305G>A	p.Q435Q	Chr.7: 27107942-27107942 on Build GRCh38
3637717	c.1294G>A	p.G432R	Chr.7: 27107953-27107953 on Build GRCh38
1254347	c.1218C>T	p.S406S	Chr.7: 27108029-27108029 on Build GRCh38
345960	c.1291C>G	p.Q431E	Chr.7: 27107956-27107956 on Build GRCh38
1254345	c.1274C>G	p.T425S	Chr.7: 27107973-27107973 on Build GRCh38
6681606	c.1191C>G	p.D397E	Chr.7: 27108056-27108056 on Build GRCh38
6109644	c.1139C>A	p.P380Q	Chr.7: 27108108-27108108 on Build GRCh38
6109645	c.1294G>T	p.G432*	Chr.7: 27107953-27107953 on Build GRCh38
6681607	c.1153C>A	p.L385I	Chr.7: 27108094-27108094 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs763419268	Chr.7: 27107882-27107882 on Build GRCh38
rs896745916	Chr.7: 27107653-27107653 on Build GRCh38
rs760941463	Chr.7: 27108018-27108018 on Build GRCh38
rs770172796	Chr.7: 27107925-27107925 on Build GRCh38
rs534471475	Chr.7: 27107797-27107797 on Build GRCh38
rs199885709	Chr.7: 27107871-27107871 on Build GRCh38
rs746664809	Chr.7: 27107923-27107923 on Build GRCh38
rs934961266	Chr.7: 27108011-27108011 on Build GRCh38
rs746997972	Chr.7: 27108079-27108079 on Build GRCh38
rs369993289	Chr.7: 27107852-27107853 on Build GRCh38
rs923607933	Chr.7: 27107618-27107618 on Build GRCh38
rs904741230	Chr.7: 27107763-27107763 on Build GRCh38
rs772195135	Chr.7: 27107834-27107835 on Build GRCh38
rs375670849	Chr.7: 27108020-27108020 on Build GRCh38
rs550191787	Chr.7: 27107605-27107605 on Build GRCh38
rs199532403	Chr.7: 27108065-27108065 on Build GRCh38
rs771076275	Chr.7: 27108081-27108081 on Build GRCh38
rs748193368	Chr.7: 27107835-27107835 on Build GRCh38
rs576361734	Chr.7: 27107991-27107991 on Build GRCh38
rs979617050	Chr.7: 27107606-27107606 on Build GRCh38
rs764128970	Chr.7: 27107884-27107884 on Build GRCh38
rs745550334	Chr.7: 27108039-27108039 on Build GRCh38
rs770556616	Chr.7: 27107997-27107997 on Build GRCh38
rs777442846	Chr.7: 27107921-27107921 on Build GRCh38
rs772165466	Chr.7: 27108016-27108016 on Build GRCh38
rs771716222	Chr.7: 27107920-27107920 on Build GRCh38
rs754837607	Chr.7: 27107981-27107981 on Build GRCh38
rs772517713	Chr.7: 27108066-27108066 on Build GRCh38
rs766458165	Chr.7: 27108019-27108019 on Build GRCh38
rs377638703	Chr.7: 27107692-27107693 on Build GRCh38
rs775758892	Chr.7: 27107932-27107932 on Build GRCh38
rs887972629	Chr.7: 27107722-27107722 on Build GRCh38
rs186936655	Chr.7: 27107727-27107727 on Build GRCh38
rs182660365	Chr.7: 27107623-27107623 on Build GRCh38
rs762328098	Chr.7: 27108013-27108013 on Build GRCh38
rs757934192	Chr.7: 27107985-27107985 on Build GRCh38
rs779731853	Chr.7: 27107895-27107895 on Build GRCh38
rs934943116	Chr.7: 27107764-27107764 on Build GRCh38
rs377427078	Chr.7: 27107897-27107897 on Build GRCh38
rs767612903	Chr.7: 27107964-27107964 on Build GRCh38
rs867271066	Chr.7: 27107788-27107788 on Build GRCh38
rs750612423	Chr.7: 27107892-27107892 on Build GRCh38
rs765096151	Chr.7: 27108086-27108086 on Build GRCh38
rs757456899	Chr.7: 27107887-27107887 on Build GRCh38
rs778557985	Chr.7: 27107906-27107906 on Build GRCh38
rs767668046	Chr.7: 27107888-27107888 on Build GRCh38
rs946498460	Chr.7: 27107597-27107597 on Build GRCh38
rs1015536142	Chr.7: 27107993-27107993 on Build GRCh38
rs1027532948	Chr.7: 27107660-27107660 on Build GRCh38
rs374297287	Chr.7: 27108064-27108064 on Build GRCh38
rs879148850	Chr.7: 27107834-27107834 on Build GRCh38
rs879160023	Chr.7: 27107833-27107834 on Build GRCh38
rs1052770356	Chr.7: 27107785-27107785 on Build GRCh38
rs73071548	Chr.7: 27107811-27107811 on Build GRCh38
rs570012832	Chr.7: 27107705-27107705 on Build GRCh38
rs867913576	Chr.7: 27107607-27107607 on Build GRCh38
rs772754901	Chr.7: 27107865-27107865 on Build GRCh38
rs752660851	Chr.7: 27108031-27108031 on Build GRCh38
rs374216046	Chr.7: 27107886-27107886 on Build GRCh38
rs1018091605	Chr.7: 27107949-27107949 on Build GRCh38
rs1056609748	Chr.7: 27107638-27107638 on Build GRCh38
rs201851892	Chr.7: 27107770-27107770 on Build GRCh38
rs992902096	Chr.7: 27107726-27107726 on Build GRCh38
rs924627235	Chr.7: 27107827-27107827 on Build GRCh38
rs766238805	Chr.7: 27107655-27107655 on Build GRCh38
rs763656046	Chr.7: 27108037-27108037 on Build GRCh38
rs759888198	Chr.7: 27108085-27108085 on Build GRCh38
rs572221578	Chr.7: 27107760-27107760 on Build GRCh38
rs769210162	Chr.7: 27107938-27107938 on Build GRCh38
rs747607192	Chr.7: 27107916-27107916 on Build GRCh38
rs776018013	Chr.7: 27107876-27107876 on Build GRCh38
rs879129544	Chr.7: 27107862-27107862 on Build GRCh38
rs369064106	Chr.7: 27107800-27107800 on Build GRCh38
rs1015461492	Chr.7: 27107735-27107735 on Build GRCh38
rs775493554	Chr.7: 27108088-27108088 on Build GRCh38
rs770426477	Chr.7: 27107833-27107835 on Build GRCh38
rs755283242	Chr.7: 27108044-27108044 on Build GRCh38
rs1045749988	Chr.7: 27108027-27108027 on Build GRCh38
rs371241609	Chr.7: 27107980-27107980 on Build GRCh38
rs373103767	Chr.7: 27107853-27107854 on Build GRCh38
rs776948256	Chr.7: 27108082-27108082 on Build GRCh38
rs193202877	Chr.7: 27107894-27107894 on Build GRCh38
rs748997447	Chr.7: 27107978-27107978 on Build GRCh38
rs765147497	Chr.7: 27108023-27108023 on Build GRCh38
rs750607456	Chr.7: 27107966-27107966 on Build GRCh38
rs776644792	Chr.7: 27107875-27107876 on Build GRCh38
rs371131962	Chr.7: 27108004-27108004 on Build GRCh38
rs59078276	Chr.7: 27107833-27107833 on Build GRCh38
rs538913360	Chr.7: 27107720-27107720 on Build GRCh38
rs765553961	Chr.7: 27107875-27107875 on Build GRCh38
rs556513817	Chr.7: 27107940-27107940 on Build GRCh38
rs538585158	Chr.7: 27107982-27107982 on Build GRCh38
rs761812872	Chr.7: 27107958-27107958 on Build GRCh38
rs766164161	Chr.7: 27107977-27107977 on Build GRCh38
rs763446165	Chr.7: 27107937-27107937 on Build GRCh38
rs1027934968	Chr.7: 27107957-27107959 on Build GRCh38
rs796959362	Chr.7: 27107852-27107852 on Build GRCh38
rs545309894	Chr.7: 27108012-27108012 on Build GRCh38
rs997525298	Chr.7: 27107786-27107786 on Build GRCh38
rs1045251003	Chr.7: 27107657-27107657 on Build GRCh38
rs777199380	Chr.7: 27107988-27107988 on Build GRCh38
rs749595911	Chr.7: 27108003-27108003 on Build GRCh38
rs71554077	Chr.7: 27107988-27107989 on Build GRCh38
rs753788812	Chr.7: 27107896-27107896 on Build GRCh38
rs773201682	Chr.7: 27108017-27108017 on Build GRCh38
rs565412992	Chr.7: 27108032-27108032 on Build GRCh38
rs780452042	Chr.7: 27107999-27107999 on Build GRCh38
rs376166790	Chr.7: 27108038-27108038 on Build GRCh38
rs773785595	Chr.7: 27108069-27108069 on Build GRCh38
rs71554076	Chr.7: 27107881-27107882 on Build GRCh38
rs534977529	Chr.7: 27107984-27107984 on Build GRCh38
rs948891829	Chr.7: 27107743-27107743 on Build GRCh38

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