Product Details

Primer Sequences

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Primer Chromosome Location

Chr.6: 56057626-56057879 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

COL21A1

Entrez Gene ID

81578

Gene Name

collagen type XXI alpha 1 chain

Gene Aliases

COLA1L, FP633

UniGene

Hs.47629

Gene Chromosome Location

Chr.6: 56056590-56394128 on Build GRCh38

Transcripts

NM_001318751.1 NM_001318752.1 NM_001318753.1 NM_001318754.1 NM_030820.3 NR_134849.1 NR_134850.1 NR_134851.1 XM_006715223.1 XM_011514924.2 XM_011514925.2 XM_011514926.1 XM_011514927.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4896861	c.2773G>A	p.G925R	Chr.6: 56057758-56057758 on Build GRCh38
4155259	c.2796C>G	p.P932P	Chr.6: 56057735-56057735 on Build GRCh38
1080469	c.2861G>A	p.G954E	Chr.6: 56057670-56057670 on Build GRCh38
5405627	c.2853C>T	p.F951F	Chr.6: 56057678-56057678 on Build GRCh38
4872835	c.2785C>T	p.Q929*	Chr.6: 56057746-56057746 on Build GRCh38
3158272	c.2719G>T	p.G907C	Chr.6: 56057812-56057812 on Build GRCh38
4356387	c.2720G>A	p.G907D	Chr.6: 56057811-56057811 on Build GRCh38
7447564	c.2801G>C	p.G934A	Chr.6: 56057730-56057730 on Build GRCh38
7003363	c.2715A>G	p.K905K	Chr.6: 56057816-56057816 on Build GRCh38
5590308	c.2702C>T	p.P901L	Chr.6: 56057829-56057829 on Build GRCh38
4356380	c.2850G>A	p.P950P	Chr.6: 56057681-56057681 on Build GRCh38
1080473	c.2785C>T	p.Q929*	Chr.6: 56057746-56057746 on Build GRCh38
5997027	c.2863C>A	p.P955T	Chr.6: 56057668-56057668 on Build GRCh38
5590307	c.2702C>T	p.P901L	Chr.6: 56057829-56057829 on Build GRCh38
4650178	c.2808C>T	p.C936C	Chr.6: 56057723-56057723 on Build GRCh38
5517970	c.2764G>A	p.G922R	Chr.6: 56057767-56057767 on Build GRCh38
5517969	c.2764G>A	p.G922R	Chr.6: 56057767-56057767 on Build GRCh38
5164503	c.2702_2703ins31	p.G902fs*52	Chr.6: 56057828-56057829 on Build GRCh38
5357112	c.2866A>C	p.N956H	Chr.6: 56057665-56057665 on Build GRCh38
4870742	c.2836G>A	p.A946T	Chr.6: 56057695-56057695 on Build GRCh38
3158260	c.2809G>A	p.D937N	Chr.6: 56057722-56057722 on Build GRCh38
4155260	c.2796C>G	p.P932P	Chr.6: 56057735-56057735 on Build GRCh38
5405628	c.2853C>T	p.F951F	Chr.6: 56057678-56057678 on Build GRCh38
5357113	c.2866A>C	p.N956H	Chr.6: 56057665-56057665 on Build GRCh38
4484743	c.2848C>T	p.P950S	Chr.6: 56057683-56057683 on Build GRCh38
7279182	c.2798delC	p.P933fs*12	Chr.6: 56057733-56057733 on Build GRCh38
4673687	c.2859_2860insA	p.G954fs*>5	Chr.6: 56057671-56057672 on Build GRCh38
5773175	c.2760C>T	p.D920D	Chr.6: 56057771-56057771 on Build GRCh38
4655992	c.2692G>T	p.E898*	Chr.6: 56057839-56057839 on Build GRCh38
5773174	c.2760C>T	p.D920D	Chr.6: 56057771-56057771 on Build GRCh38
3628800	c.2774G>A	p.G925E	Chr.6: 56057757-56057757 on Build GRCh38
3628796	c.2791G>A	p.G931S	Chr.6: 56057740-56057740 on Build GRCh38
6049975	c.2745T>C	p.P915P	Chr.6: 56057786-56057786 on Build GRCh38
4859594	c.2727A>T	p.P909P	Chr.6: 56057804-56057804 on Build GRCh38
7447565	c.2801G>C	p.G934A	Chr.6: 56057730-56057730 on Build GRCh38
5405631	c.2840G>A	p.R947K	Chr.6: 56057691-56057691 on Build GRCh38
3158270	c.2720G>A	p.G907D	Chr.6: 56057811-56057811 on Build GRCh38
5405630	c.2840G>A	p.R947K	Chr.6: 56057691-56057691 on Build GRCh38
4896862	c.2773G>A	p.G925R	Chr.6: 56057758-56057758 on Build GRCh38
4356388	c.2719G>T	p.G907C	Chr.6: 56057812-56057812 on Build GRCh38
597034	c.2848C>T	p.P950S	Chr.6: 56057683-56057683 on Build GRCh38
1080471	c.2836G>A	p.A946T	Chr.6: 56057695-56057695 on Build GRCh38
7003362	c.2715A>G	p.K905K	Chr.6: 56057816-56057816 on Build GRCh38
5997026	c.2863C>A	p.P955T	Chr.6: 56057668-56057668 on Build GRCh38
4356382	c.2809G>A	p.D937N	Chr.6: 56057722-56057722 on Build GRCh38
742447	c.2727A>T	p.P909P	Chr.6: 56057804-56057804 on Build GRCh38
395343	c.2817A>T	p.S939S	Chr.6: 56057714-56057714 on Build GRCh38
4655991	c.2692G>T	p.E898*	Chr.6: 56057839-56057839 on Build GRCh38
1201837	c.2792G>A	p.G931D	Chr.6: 56057739-56057739 on Build GRCh38
3158256	c.2850G>A	p.P950P	Chr.6: 56057681-56057681 on Build GRCh38
4673686	c.2859_2860insA	p.G954fs*>5	Chr.6: 56057671-56057672 on Build GRCh38
4650179	c.2808C>T	p.C936C	Chr.6: 56057723-56057723 on Build GRCh38
3628799	c.2774G>A	p.G925E	Chr.6: 56057757-56057757 on Build GRCh38
3628794	c.2861G>A	p.G954E	Chr.6: 56057670-56057670 on Build GRCh38
3628797	c.2791G>A	p.G931S	Chr.6: 56057740-56057740 on Build GRCh38
6049976	c.2745T>C	p.P915P	Chr.6: 56057786-56057786 on Build GRCh38
5710184	c.2813C>T	p.P938L	Chr.6: 56057718-56057718 on Build GRCh38
7279181	c.2798delC	p.P933fs*12	Chr.6: 56057733-56057733 on Build GRCh38
5710185	c.2813C>T	p.P938L	Chr.6: 56057718-56057718 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs765492111	Chr.6: 56057770-56057770 on Build GRCh38
rs369126858	Chr.6: 56057682-56057682 on Build GRCh38
rs990223245	Chr.6: 56057844-56057844 on Build GRCh38
rs772343661	Chr.6: 56057709-56057709 on Build GRCh38
rs563672300	Chr.6: 56057722-56057722 on Build GRCh38
rs750677253	Chr.6: 56057775-56057775 on Build GRCh38
rs753959414	Chr.6: 56057695-56057695 on Build GRCh38
rs201992128	Chr.6: 56057743-56057743 on Build GRCh38
rs758492507	Chr.6: 56057777-56057777 on Build GRCh38
rs193200197	Chr.6: 56057694-56057694 on Build GRCh38
rs552856218	Chr.6: 56057646-56057646 on Build GRCh38
rs373190414	Chr.6: 56057729-56057729 on Build GRCh38
rs777638805	Chr.6: 56057690-56057690 on Build GRCh38
rs1005260526	Chr.6: 56057659-56057659 on Build GRCh38
rs745928217	Chr.6: 56057708-56057708 on Build GRCh38
rs763757346	Chr.6: 56057747-56057747 on Build GRCh38
rs944048908	Chr.6: 56057852-56057852 on Build GRCh38
rs376532958	Chr.6: 56057681-56057681 on Build GRCh38
rs767432926	Chr.6: 56057673-56057673 on Build GRCh38
rs757058141	Chr.6: 56057762-56057762 on Build GRCh38
rs766194518	Chr.6: 56057820-56057820 on Build GRCh38
rs867859797	Chr.6: 56057833-56057833 on Build GRCh38
rs1016699668	Chr.6: 56057665-56057665 on Build GRCh38
rs748535992	Chr.6: 56057832-56057832 on Build GRCh38
rs199644204	Chr.6: 56057718-56057718 on Build GRCh38
rs777081645	Chr.6: 56057726-56057726 on Build GRCh38
rs781603130	Chr.6: 56057825-56057825 on Build GRCh38
rs767020357	Chr.6: 56057741-56057741 on Build GRCh38
rs200348432	Chr.6: 56057723-56057723 on Build GRCh38
rs774051086	Chr.6: 56057732-56057732 on Build GRCh38
rs779051889	Chr.6: 56057702-56057702 on Build GRCh38
rs559516314	Chr.6: 56057779-56057779 on Build GRCh38
rs373288668	Chr.6: 56057696-56057696 on Build GRCh38
rs925430932	Chr.6: 56057771-56057771 on Build GRCh38
rs747529457	Chr.6: 56057721-56057721 on Build GRCh38
rs753645403	Chr.6: 56057761-56057761 on Build GRCh38
rs371479157	Chr.6: 56057663-56057663 on Build GRCh38
rs747474691	Chr.6: 56057815-56057815 on Build GRCh38
rs770598007	Chr.6: 56057730-56057730 on Build GRCh38
rs375354879	Chr.6: 56057717-56057717 on Build GRCh38
rs759045064	Chr.6: 56057737-56057737 on Build GRCh38
rs868537548	Chr.6: 56057829-56057829 on Build GRCh38
rs912640531	Chr.6: 56057826-56057826 on Build GRCh38
rs144408375	Chr.6: 56057786-56057786 on Build GRCh38
rs759100067	Chr.6: 56057667-56057667 on Build GRCh38

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