Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: HY2
Entrez Gene ID: 820069
Gene Name: phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)
Gene Aliases: ARABIDOPSIS ELONGATED HYPOCOTYL 2, AT3G09150, ATHY2, ELONGATED HYPOCOTYL 2, GENOMES UNCOUPLED 3, GUN3, PHYTOCHROMOBILIN SYNTHASE
Chromosome Location: Chr.3: 2803528 - 2805922 on Build TAIR10.1

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001337803.1	NP_001326171.1	2 - 3	461	109
	NM_111750.4	NP_566344.2	2 - 3	476	109
	NM_180665.1	NP_850996.1	2 - 3	401	109
	NM_202535.1	NP_974264.1	1 - 2	577	109
GenBank mRNA	AB045112.1	-	2 - 3	434	109
	AY099706.1	-	2 - 3	477	109
	AY128900.1	-	2 - 3	339	109