Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
Ptgs2
Entrez Gene ID
19225
Gene Name
prostaglandin-endoperoxide synthase 2
Gene Aliases
COX2, Cox-2, PGHS-2, PHS-2, Pghs2, TIS10
Chromosome Location
Chr.1: 150100124 - 150108017 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA X98792.1 - 1 - 1 2151 74


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BY535156.1 - 1 289 Chr. 1 - 150107794 - 150108231 [+] on Build GRCm38 74
GenBankmRNA BY509870.1 - 1 331 Chr. 1 - 150107752 - 150108156 [+] on Build GRCm38 74
GenBankmRNA BY372460.1 - 1 277 Chr. 1 - 150107813 - 150108153 [+] on Build GRCm38 74
GenBankmRNA BY755171.1 - 1 591 Chr. 1 - 150107491 - 150108159 [+] on Build GRCm38 74
GenBankmRNA BY558444.1 - 1 219 Chr. 1 - 150107865 - 150108234 [+] on Build GRCm38 74
GenBankmRNA BB822212.1 - 1 299 Chr. 1 - 150107784 - 150108228 [+] on Build GRCm38 74
GenBankmRNA BB813019.1 - 1 240 Chr. 1 - 150107844 - 150108226 [+] on Build GRCm38 74
GenBankmRNA BY757523.1 - 1 541 Chr. 1 - 150107551 - 150108226 [+] on Build GRCm38 74
GenBankmRNA BY516839.1 - 1 344 Chr. 1 - 150107738 - 150108156 [+] on Build GRCm38 74
GenBankmRNA BP755141.1 - 1 Chr. 1 - 150107749 - 150108226 [-] on Build GRCm38 74
GenBankmRNA BY498866.1 - 1 344 Chr. 1 - 150107739 - 150108156 [+] on Build GRCm38 74
GenBankmRNA BB813332.1 - 1 241 Chr. 1 - 150107841 - 150108231 [+] on Build GRCm38 74
GenBankmRNA BB824859.1 - 1 313 Chr. 1 - 150107768 - 150108226 [+] on Build GRCm38 74
GenBankmRNA BB148807.1 - 1 83 Chr. 1 - 150107999 - 150108228 [+] on Build GRCm38 74
GenBankmRNA BY524746.1 - 1 252 Chr. 1 - 150107829 - 150108234 [+] on Build GRCm38 74
GenBankmRNA BB143765.1 - 1 180 Chr. 1 - 150107900 - 150108226 [+] on Build GRCm38 74
GenBankmRNA BB824871.1 - 1 316 Chr. 1 - 150107765 - 150108226 [+] on Build GRCm38 74
GenBankmRNA BB786057.1 - 1 297 Chr. 1 - 150107786 - 150108226 [+] on Build GRCm38 74
GenBankmRNA BY512415.1 - 1 342 Chr. 1 - 150107741 - 150108156 [+] on Build GRCm38 74


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream prostaglandin-endoperoxide synthase 2, opposite strand Ptgs2os 7530420F21Rik -6.1kb Anti-sense Chr. - 150074873 - 150099874 on Build GRCm38
Downstream prostaglandin-endoperoxide synthase 2, opposite strand 2 Ptgs2os2 Gm26687, Linc-cox2, Lincrna-cox2 50.8kb Anti-sense Chr. - 150159043 - 150164948 on Build GRCm38

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