Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: CCA1
Entrez Gene ID: 819296
Gene Name: circadian clock associated 1
Gene Aliases: AT2G46830, AtCCA1, F19D11.11, MYB-RELATED DNA BINDING PROTEIN, circadian clock associated 1
Chromosome Location: Chr.2: 19245591 - 19248915 on Build TAIR10.1

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001337221.1	NP_001318437.1	7 - 8	2066	84
	NM_180129.4	NP_850460.1	7 - 8	1792	84
	NM_180130.2	NP_850461.1	4 - 5	1320	84
GenBank mRNA	AY519511.1	-	6 - 7	1462	84
	BT001096.1	-	3 - 4	1216	84
	BT001105.1	-	3 - 4	1216	84
	U28422.1	-	7 - 8	1699	84