Product Details

SNP ID

rs78472317

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:56059338 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTTAATATACACATGAAAGAAAAAT[A/G]TCTTTTAAAAACCAGCTTGCCATCT

Phenotype

MIM: 610002

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

COL21A1 PubMed Links

Additional Information

For this assay, SNP(s) [rs3830813] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

COL21A1

Gene Name

collagen type XXI alpha 1 chain

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001318751.1		Intron			NP_001305680.1
NM_001318752.1		Intron			NP_001305681.1
NM_001318753.1		Intron			NP_001305682.1
NM_001318754.1		Intron			NP_001305683.1
NM_030820.3		Intron			NP_110447.2
XM_006715223.1		Intron			XP_006715286.1
XM_011514924.2		Intron			XP_011513226.1
XM_011514925.2		Intron			XP_011513227.1
XM_011514926.1		Intron			XP_011513228.1
XM_011514927.1		Intron			XP_011513229.1

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