Product Details

SNP ID

rs78557143

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.18:62044626 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CACTTTGCCAAACTGATTTCTGACT[C/T]TTAAATTGTATTTATTCACTCCCCA

Phenotype

MIM: 606097

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PIGN PubMed Links

Additional Information

For this assay, SNP(s) [rs34860757] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PIGN

Gene Name

phosphatidylinositol glycan anchor biosynthesis class N

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_012327.5	3630	UTR 3			NP_036459.1
NM_176787.4	3630	UTR 3			NP_789744.1
XM_011525889.1	3630	UTR 3			XP_011524191.1
XM_011525890.1	3630	UTR 3			XP_011524192.1
XM_011525891.1	3630	UTR 3			XP_011524193.1
XM_011525892.1	3630	UTR 3			XP_011524194.1
XM_011525893.1	3630	UTR 3			XP_011524195.1
XM_011525894.1	3630	UTR 3			XP_011524196.1
XM_011525895.1	3630	UTR 3			XP_011524197.1
XM_011525896.1	3630	UTR 3			XP_011524198.1
XM_011525898.1	3630	Intron			XP_011524200.1
XM_017025685.1	3630	UTR 3			XP_016881174.1
XM_017025686.1	3630	UTR 3			XP_016881175.1

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