Product Details

SNP ID

rs117139010

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.12:26970392 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CTCCCCTCTTACTGCTCTTCACACG[A/G]TCTTTCCCCTGTGAGCACATGCACC

Phenotype

MIM: 608858 MIM: 605181

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

FGFR1OP2 PubMed Links

Additional Information

For this assay, SNP(s) [rs11381588] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

FGFR1OP2

Gene Name

FGFR1 oncogene partner 2

There are no transcripts associated with this gene.

Gene

TM7SF3

Gene Name

transmembrane 7 superfamily member 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_016551.2	5635	Intron			NP_057635.1
XM_005253391.3	5635	UTR 3			XP_005253448.1
XM_011520690.2	5635	UTR 3			XP_011518992.1
XM_011520691.1	5635	Intron			XP_011518993.1
XM_017019463.1	5635	UTR 3			XP_016874952.1
XM_017019464.1	5635	UTR 3			XP_016874953.1
XM_017019465.1	5635	UTR 3			XP_016874954.1
XM_017019466.1	5635	UTR 3			XP_016874955.1

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