Product Details

SNP ID

rs116223719

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.19:49364655 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TCCTCTCTACCCTGGTGATCCCCTC[C/T]GCTGCAGCTCCTATCCATGATGCTG

Phenotype

MIM: 605418 MIM: 601729

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

DKKL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs919364] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

DKKL1

Gene Name

dickkopf like acrosomal protein 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001197301.1	168	Intron			NP_001184230.1
NM_001197302.1	168	Intron			NP_001184231.1
NM_014419.3	168	Silent Mutation	TCC,TCT	S28S	NP_055234.1
XM_006723142.2	168	Silent Mutation	TCC,TCT	S43S	XP_006723205.1
XM_011526724.1	168	Silent Mutation	TCC,TCT	S51S	XP_011525026.1
XM_011526725.1	168	Silent Mutation	TCC,TCT	S35S	XP_011525027.1
XM_011526726.2	168	Silent Mutation	TCC,TCT	S35S	XP_011525028.1
XM_011526727.2	168	Silent Mutation	TCC,TCT	S51S	XP_011525029.1
XM_011526728.2	168	Silent Mutation	TCC,TCT	S51S	XP_011525030.1
XM_011526729.1	168	UTR 5			XP_011525031.1
XM_017026593.1	168	UTR 5			XP_016882082.1

Gene

LOC101928295

Gene Name

uncharacterized LOC101928295

There are no transcripts associated with this gene.

Gene

TEAD2

Gene Name

TEA domain transcription factor 2

There are no transcripts associated with this gene.

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