Product Details

SNP ID

rs150806636

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:104995793 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ATCTCTTGTCAAGGTTGCTCGTTCT[A/G]TGGTGGGCATCTGGGCTTTAGCCTG

Phenotype

MIM: 602665

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CASP5 PubMed Links

Additional Information

For this assay, SNP(s) [rs540819] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CASP5

Gene Name

caspase 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001136109.1	862	Missense Mutation	ACA,ATA	T361I	NP_001129581.1
NM_001136110.1	862	Missense Mutation	ACA,ATA	T277I	NP_001129582.1
NM_001136112.1	862	Missense Mutation	ACA,ATA	T432I	NP_001129584.1
NM_004347.3	862	Missense Mutation	ACA,ATA	T419I	NP_004338.3
XM_011543021.2	862	Intron			XP_011541323.1

View Full Product Details