Product Details

SNP ID

rs137894462

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:218357703 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGCATGCCTCTAGCCGAGGCTTCTT[A/G]GACAAAATGCTCTGCGGAAATTCCC

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CATIP PubMed Links

Additional Information

For this assay, SNP(s) [rs145097529] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CATIP

Gene Name

ciliogenesis associated TTC17 interacting protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001320865.1	485	Silent Mutation	TTA,TTG	L107L	NP_001307794.1
NM_198559.1	485	Silent Mutation	TTA,TTG	L96L	NP_940961.1
XM_005246539.4	485	Silent Mutation	TTA,TTG	L65L	XP_005246596.1
XM_005246541.4	485	Intron			XP_005246598.1
XM_011511148.2	485	Silent Mutation	TTA,TTG	L107L	XP_011509450.1
XM_011511149.2	485	UTR 5			XP_011509451.1
XM_011511150.2	485	Intron			XP_011509452.1
XM_017004053.1	485	UTR 5			XP_016859542.1

Gene

CATIP-AS1

Gene Name

CATIP antisense RNA 1

There are no transcripts associated with this gene.

Gene

CATIP-AS2

Gene Name

CATIP antisense RNA 2

There are no transcripts associated with this gene.

View Full Product Details