Product Details

SNP ID

rs11540336

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:854550 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGCACGTCTAGAGGGGCCCGGGCAG[A/G]GGCCACCCACGGTCCCTGAAGTAGG

Phenotype

MIM: 611761

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LMF1 PubMed Links

Additional Information

For this assay, SNP(s) [rs4984948] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LMF1

Gene Name

lipase maturation factor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_022773.2	2269	Silent Mutation	CCC,CCT	P562P	NP_073610.2
XM_006720928.2	2269	Silent Mutation	CCC,CCT	P453P	XP_006720991.1
XM_006720929.3	2269	Silent Mutation	CCC,CCT	P429P	XP_006720992.1
XM_011522614.2	2269	Intron			XP_011520916.1
XM_011522615.1	2269	Intron			XP_011520917.1
XM_011522617.2	2269	Silent Mutation	CCC,CCT	P345P	XP_011520919.1
XM_011522618.2	2269	Intron			XP_011520920.1
XM_017023575.1	2269	Intron			XP_016879064.1
XM_017023576.1	2269	Silent Mutation	CCC,CCT	P484P	XP_016879065.1
XM_017023577.1	2269	Silent Mutation	CCC,CCT	P429P	XP_016879066.1
XM_017023578.1	2269	Silent Mutation	CCC,CCT	P350P	XP_016879067.1
XM_017023579.1	2269	Silent Mutation	CCC,CCT	P345P	XP_016879068.1
XM_017023580.1	2269	Silent Mutation	CCC,CCT	P345P	XP_016879069.1
XM_017023581.1	2269	Intron			XP_016879070.1

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