Product Details

SNP ID

rs2058389

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.7:76003891 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

GGACCACACAGGTCATCAGGTGGAA[C/T]GCAGAATGCAGGCATCCCCATTGTG

Phenotype

MIM: 616695 MIM: 616550

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

STYXL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs76090562] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

STYXL1

Gene Name

serine/threonine/tyrosine interacting-like 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001317785.1		Intron			NP_001304714.1
NM_001317786.1		Intron			NP_001304715.1
NM_001317787.1		Intron			NP_001304716.1
NM_001317788.1		Intron			NP_001304717.1
NM_001317789.1		Intron			NP_001304718.1
NM_016086.2		Intron			NP_057170.1
XM_011516292.2		Intron			XP_011514594.1
XM_011516293.2		Intron			XP_011514595.1
XM_011516300.1		Intron			XP_011514602.1
XM_017012296.1		Intron			XP_016867785.1
XM_017012297.1		Intron			XP_016867786.1
XM_017012298.1		Intron			XP_016867787.1
XM_017012299.1		Intron			XP_016867788.1
XM_017012300.1		Intron			XP_016867789.1
XM_017012301.1		Intron			XP_016867790.1
XM_017012302.1		Intron			XP_016867791.1

Gene

TMEM120A

Gene Name

transmembrane protein 120A

There are no transcripts associated with this gene.

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