Product Details

SNP ID

rs9827333

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:171603233 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CGAATGGGATCTTCCTTAGCTAATA[C/T]GGGCTTGTTTATAAAGTCTCTCAGC

Phenotype

MIM: 602382

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PLD1 PubMed Links

Additional Information

For this assay, SNP(s) [rs75970900] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PLD1

Gene Name

phospholipase D1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001130081.2	3152	Missense Mutation	ATA,GTA	I986V	NP_001123553.1
NM_002662.4	3152	Missense Mutation	ATA,GTA	I1024V	NP_002653.1
XM_005247533.2	3152	Missense Mutation	ATA,GTA	I1024V	XP_005247590.1
XM_005247534.2	3152	Missense Mutation	ATA,GTA	I986V	XP_005247591.1
XM_011512897.1	3152	Intron			XP_011511199.1
XM_011512898.1	3152	Intron			XP_011511200.1
XM_011512899.2	3152	Missense Mutation	ATA,GTA	I607V	XP_011511201.1
XM_017006623.1	3152	Intron			XP_016862112.1
XM_017006624.1	3152	Missense Mutation	ATA,GTA	I607V	XP_016862113.1

View Full Product Details