Product Details

SNP ID

rs2505511

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:43145581 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GCATCGCCACGCCTGGCTAATTTTT[A/T]AATTTCTTATAGAGGCAAGGTCTCG

Phenotype

MIM: 616616

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

CSGALNACT2 PubMed Links

Additional Information

For this assay, SNP(s) [rs78914303] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CSGALNACT2

Gene Name

chondroitin sulfate N-acetylgalactosaminyltransferase 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001319654.1		Intron			NP_001306583.1
NM_001319656.1		Intron			NP_001306585.1
NM_018590.4		Intron			NP_061060.3
XM_011539938.1		Intron			XP_011538240.1
XM_017016388.1		Intron			XP_016871877.1
XM_017016389.1		Intron			XP_016871878.1
XM_017016390.1		Intron			XP_016871879.1
XM_017016391.1		Intron			XP_016871880.1

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