Product Details

SNP ID

rs3741917

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.12:6534973 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCGTATGGGGGCAGGGTAGCTGTTC[C/T]CCGCAAGGAGAGCTCAAGGTCAGCG

Phenotype

MIM: 138400 MIM: 610495 MIM: 615638

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GAPDH PubMed Links

Additional Information

For this assay, SNP(s) [rs151310315] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GAPDH

Gene Name

glyceraldehyde-3-phosphate dehydrogenase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001256799.2		Intron			NP_001243728.1
NM_001289745.1		Intron			NP_001276674.1
NM_001289746.1		Intron			NP_001276675.1
NM_002046.5		Intron			NP_002037.2

Gene

IFFO1

Gene Name

intermediate filament family orphan 1

There are no transcripts associated with this gene.

Gene

NCAPD2

Gene Name

non-SMC condensin I complex subunit D2

There are no transcripts associated with this gene.

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