Product Details

SNP ID

rs13374837

Assay Type

Functionally Tested

NCBI dbSNP Submissions

56

Location

Chr.1:21813855 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AAGCAGGAAGAAAAGGGGCTCCTTA[C/T]CACACAGCTCTCCCCCTCCCCTTTT

Phenotype

MIM: 142461

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

HSPG2 PubMed Links

Additional Information

For this assay, SNP(s) [rs79500108] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HSPG2

Gene Name

heparan sulfate proteoglycan 2

There are no transcripts associated with this gene.

Gene

LDLRAD2

Gene Name

low density lipoprotein receptor class A domain containing 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001013693.2		Intron			NP_001013715.2
XM_005245873.4		Intron			XP_005245930.1

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