Product Details

SNP ID

rs10985085

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.9:120903019 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CTGTTTCTCATGGGGGCTTGTTCTA[C/T]AAATCCCCCCTTGGGCTCAACACTC

Phenotype

MIM: 609740 MIM: 601711

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PHF19 PubMed Links

Additional Information

For this assay, SNP(s) [rs7037154] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PHF19

Gene Name

PHD finger protein 19

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001009936.2	3677	Intron			NP_001009936.1
NM_001286840.1	3677	Intron			NP_001273769.1
NM_001286842.1	3677	Intron			NP_001273771.1
NM_001286843.1	3677	Intron			NP_001273772.1
NM_015651.2	3677	Intron			NP_056466.1

Gene

TRAF1

Gene Name

TNF receptor associated factor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001190945.1	3677	UTR 3			NP_001177874.1
NM_001190947.1	3677	UTR 3			NP_001177876.1
NM_005658.4	3677	UTR 3			NP_005649.1

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