Product Details

SNP ID

rs11805141

Assay Type

Functionally Tested

NCBI dbSNP Submissions

20

Location

Chr.1:5864679 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CAACCAACCCTGACATGACTGTGGC[C/T]GCGACTTGGGTCCACACCAGGCAAG

Phenotype

MIM: 607215

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

MIR4689 PubMed Links

Additional Information

For this assay, SNP(s) [rs114555857] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

MIR4689

Gene Name

microRNA 4689

There are no transcripts associated with this gene.

Gene

NPHP4

Gene Name

nephronophthisis 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001291593.1	4114	Intron			NP_001278522.1
NM_001291594.1	4114	Intron			NP_001278523.1
NM_015102.4	4114	Intron			NP_055917.1
XM_006710563.3	4114	Intron			XP_006710626.1
XM_011541213.1	4114	Intron			XP_011539515.1
XM_011541214.1	4114	Intron			XP_011539516.1
XM_011541215.1	4114	Intron			XP_011539517.1
XM_011541216.2	4114	Intron			XP_011539518.1
XM_011541217.2	4114	Intron			XP_011539519.1
XM_011541218.2	4114	Intron			XP_011539520.1
XM_017000996.1	4114	Intron			XP_016856485.1
XM_017000997.1	4114	Intron			XP_016856486.1
XM_017000998.1	4114	UTR 3			XP_016856487.1
XM_017000999.1	4114	Intron			XP_016856488.1
XM_017001000.1	4114	Intron			XP_016856489.1
XM_017001001.1	4114	Intron			XP_016856490.1
XM_017001002.1	4114	Intron			XP_016856491.1
XM_017001003.1	4114	Intron			XP_016856492.1

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